TomoSeq data search

Data search

Results for MligTC455_28411

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_28411	6267	130.55	Mlig455_024931	Neo: - Age: Down-Up-Up	CALM1	Mlig455_024931 {REF} {Length: 848} {Pfam: EF hand [PF00036.34, score=142.1]; EF-hand domain pair [PF13499.8, score=129.0]; EF-hand domain pair [PF13833.8, score=108.2]; EF-hand domain [PF13405.8, score=102.0]; EF hand [PF13202.8, score=92.2]; EF-hand domain [PF14658.8, score=59.4]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=37.0]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=32.7]; Uncharacterised protein family (UPF0154) [PF03672.15, score=23.9]; EF-hand domain [PF08976.13, score=22.9]; RNA polymerase Rpb4 [PF03874.18, score=21.7]; Ca2+ insensitive EF hand [PF08726.12, score=20.9]; Family of unknown function (DUF5580) [PF17743.3, score=20.6]; Caleosin related protein [PF05042.15, score=20.4]; Tellurite resistance protein TerB [PF05099.15, score=19.5]; Dockerin type I domain [PF00404.20, score=19.0]; Repeat of unknown function (DUF1103) [PF06513.13, score=18.6]} {Human: ENSG00000198668, CALM1, calmodulin 1, [RH, Score=285, Expect=3e-100]; ENSG00000160014, CALM3, calmodulin 3, [RH, Score=285, Expect=3e-100]; ENSG00000143933, CALM2, calmodulin 2, [RH, Score=285, Expect=3e-100]} {Mouse: ENSMUSG00000019370, Calm3, calmodulin 3, [RH, Score=285, Expect=2e-100]; ENSMUSG00000036438, Calm2, calmodulin 2, [RH, Score=285, Expect=2e-100]; ENSMUSG00000001175, Calm1, calmodulin 1, [RH, Score=285, Expect=2e-100]} {Dmel: FBgn0000253, Cam, Calmodulin, [RH, Score=286, Expect=5e-101]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [RH, Score=285, Expect=1e-100]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [RH, Score=285, Expect=1e-100]} {RNA1509_18839, RNA1509_2146} {RNA1310_47647, RNA1509_18839} {RNA1509_18839, RNA815_17091}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_28411

6267

130.55

Mlig455_024931

Neo: -

Age: Down-Up-Up

CALM1

Mlig455_024931 {REF} {Length: 848} {Pfam: EF hand [PF00036.34, score=142.1]; EF-hand domain pair [PF13499.8, score=129.0]; EF-hand domain pair [PF13833.8, score=108.2]; EF-hand domain [PF13405.8, score=102.0]; EF hand [PF13202.8, score=92.2]; EF-hand domain [PF14658.8, score=59.4]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=37.0]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=32.7]; Uncharacterised protein family (UPF0154) [PF03672.15, score=23.9]; EF-hand domain [PF08976.13, score=22.9]; RNA polymerase Rpb4 [PF03874.18, score=21.7]; Ca2+ insensitive EF hand [PF08726.12, score=20.9]; Family of unknown function (DUF5580) [PF17743.3, score=20.6]; Caleosin related protein [PF05042.15, score=20.4]; Tellurite resistance protein TerB [PF05099.15, score=19.5]; Dockerin type I domain [PF00404.20, score=19.0]; Repeat of unknown function (DUF1103) [PF06513.13, score=18.6]} {Human: ENSG00000198668, CALM1, calmodulin 1, [RH, Score=285, Expect=3e-100]; ENSG00000160014, CALM3, calmodulin 3, [RH, Score=285, Expect=3e-100]; ENSG00000143933, CALM2, calmodulin 2, [RH, Score=285, Expect=3e-100]} {Mouse: ENSMUSG00000019370, Calm3, calmodulin 3, [RH, Score=285, Expect=2e-100]; ENSMUSG00000036438, Calm2, calmodulin 2, [RH, Score=285, Expect=2e-100]; ENSMUSG00000001175, Calm1, calmodulin 1, [RH, Score=285, Expect=2e-100]} {Dmel: FBgn0000253, Cam, Calmodulin, [RH, Score=286, Expect=5e-101]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [RH, Score=285, Expect=1e-100]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [RH, Score=285, Expect=1e-100]} {RNA1509_18839, RNA1509_2146} {RNA1310_47647, RNA1509_18839} {RNA1509_18839, RNA815_17091}

Cumulative graph for MligTC455_28411

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.569	7.085	0.01815	0.37612
RegionR2	0.486	7.085	0.25613	0.63664
RegionR3	0.408	7.085	0.26935	0.81403
RegionR4	0.891	7.085	0.02756	0.12793
RegionR5	-0.194	7.085	0.60503	0.96240
RegionR6	0.423	7.085	0.24576	0.83150
RegionR7	-0.108	7.085	0.77863	1.00000
RegionR8	-0.337	7.085	0.42344	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.09	7.085	0.90984	1.00000
RegenerationR2	0.264	7.085	0.56899	0.90213
RegenerationR3	0.319	7.085	0.50450	0.85894
RegenerationR4	0.346	7.085	0.47599	0.85650
RegenerationR5	0.211	7.085	0.65742	0.93469
RegenerationR6	-0.009	7.085	0.98410	1.00000
RegenerationBL	0.755	7.085	0.05758	0.27826
RegenerationTP	-0.165	7.085	0.71638	1.00000

Genes with expression patterns similar to MligTC455_28411

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_28411	6267	130.55	Mlig455_024931	Neo: - Age: Down-Up-Up	CALM1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_024931 {REF} {Length: 848} {Pfam: EF hand [PF00036.34, score=142.1]; EF-hand domain pair [PF13499.8, score=129.0]; EF-hand domain pair [PF13833.8, score=108.2]; EF-hand domain [PF13405.8, score=102.0]; EF hand [PF13202.8, score=92.2]; EF-hand domain [PF14658.8, score=59.4]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=37.0]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=32.7]; Uncharacterised protein family (UPF0154) [PF03672.15, score=23.9]; EF-hand domain [PF08976.13, score=22.9]; RNA polymerase Rpb4 [PF03874.18, score=21.7]; Ca2+ insensitive EF hand [PF08726.12, score=20.9]; Family of unknown function (DUF5580) [PF17743.3, score=20.6]; Caleosin related protein [PF05042.15, score=20.4]; Tellurite resistance protein TerB [PF05099.15, score=19.5]; Dockerin type I domain [PF00404.20, score=19.0]; Repeat of unknown function (DUF1103) [PF06513.13, score=18.6]} {Human: ENSG00000198668, CALM1, calmodulin 1, [RH, Score=285, Expect=3e-100]; ENSG00000160014, CALM3, calmodulin 3, [RH, Score=285, Expect=3e-100]; ENSG00000143933, CALM2, calmodulin 2, [RH, Score=285, Expect=3e-100]} {Mouse: ENSMUSG00000019370, Calm3, calmodulin 3, [RH, Score=285, Expect=2e-100]; ENSMUSG00000036438, Calm2, calmodulin 2, [RH, Score=285, Expect=2e-100]; ENSMUSG00000001175, Calm1, calmodulin 1, [RH, Score=285, Expect=2e-100]} {Dmel: FBgn0000253, Cam, Calmodulin, [RH, Score=286, Expect=5e-101]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [RH, Score=285, Expect=1e-100]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [RH, Score=285, Expect=1e-100]} {RNA1509_18839, RNA1509_2146} {RNA1310_47647, RNA1509_18839} {RNA1509_18839, RNA815_17091}
2.	MligTC455_28412	22398	466.62	Mlig455_024966	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.312	CALM1	4.303	-	0.786	0.808	0.862	0.950	0.897	Mlig455_024966 {REF} {Length: 1079} {Pfam: EF hand [PF00036.34, score=142.1]; EF-hand domain pair [PF13499.8, score=129.0]; EF-hand domain pair [PF13833.8, score=108.2]; EF-hand domain [PF13405.8, score=102.0]; EF hand [PF13202.8, score=92.2]; EF-hand domain [PF14658.8, score=59.4]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=37.0]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=32.7]; Uncharacterised protein family (UPF0154) [PF03672.15, score=23.9]; EF-hand domain [PF08976.13, score=22.9]; RNA polymerase Rpb4 [PF03874.18, score=21.7]; Ca2+ insensitive EF hand [PF08726.12, score=20.9]; Family of unknown function (DUF5580) [PF17743.3, score=20.6]; Caleosin related protein [PF05042.15, score=20.4]; Tellurite resistance protein TerB [PF05099.15, score=19.5]; Dockerin type I domain [PF00404.20, score=19.0]; Repeat of unknown function (DUF1103) [PF06513.13, score=18.6]} {Human: ENSG00000198668, CALM1, calmodulin 1, [RH, Score=285, Expect=3e-100]; ENSG00000160014, CALM3, calmodulin 3, [RH, Score=285, Expect=3e-100]; ENSG00000143933, CALM2, calmodulin 2, [RH, Score=285, Expect=3e-100]} {Mouse: ENSMUSG00000019370, Calm3, calmodulin 3, [RH, Score=285, Expect=2e-100]; ENSMUSG00000036438, Calm2, calmodulin 2, [RH, Score=285, Expect=2e-100]; ENSMUSG00000001175, Calm1, calmodulin 1, [RH, Score=285, Expect=2e-100]} {Dmel: FBgn0000253, Cam, Calmodulin, [RH, Score=286, Expect=5e-101]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [RH, Score=285, Expect=1e-100]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [RH, Score=285, Expect=1e-100]} {RNA1509_10951, RNA1509_2027, RNA1509_2146, RNA1509_3771, RNA1509_40302, RNA1509_60131} {RNA1310_47647, RNA1509_10951, RNA1509_2027, RNA1509_2146, RNA1509_3771, RNA1509_40302, RNA1509_60131} {RNA1509_10951, RNA1509_2027, RNA1509_2146, RNA1509_3771, RNA1509_40302, RNA1509_60131, RNA815_17091}
3.	MligTC455_27638	969	20.19	Mlig455_022789	Neo: - Age: Up-Up-Down, logFC(26M/2M)=0.917	CLUAP1	1.712	-	-	0.755	0.957	-	-	Mlig455_022789 {REF} {Length: 2458} {Pfam: Clusterin-associated protein-1 [PF10234.11, score=358.0]} {Human: ENSG00000103351, CLUAP1, clusterin associated protein 1, [RH, Score=332, Expect=1e-110]} {Mouse: ENSMUSG00000014232, Cluap1, clusterin associated protein 1, [RH, Score=330, Expect=8e-110]} {Dmel: FBgn0031196, CG17599, [RH, Score=135, Expect=1e-34]} {Celegans: WBGene00001119, dyf-3, Clusterin-associated protein 1 homolog, [RH, Score=215, Expect=1e-65]} {Smed: dd_Smed_v6_8287_0_1, dd_Smed_v6_8287_0_1, [RH, Score=333, Expect=2e-110]} {RNA1509_14292, RNA1509_25335} {RNA1310_15979, RNA1509_14292, RNA1509_25335} {RNA1509_14292, RNA1509_25335, RNA815_6417.1}
4.	MligTC455_31469	1076	22.43	Mlig455_002483	Neo: - Age: Down-Up-Down	CCDC189	1.67	0.713	-	0.957	-	-	-	Mlig455_002483 {REF} {Length: 6604} {Pfam: Flagellar C1a complex subunit C1a-32 [PF14769.8, score=83.5]; PDZ domain [PF00595.26, score=76.3]; PDZ domain [PF17820.3, score=70.7]; PDZ domain [PF13180.8, score=43.3]; Tricorn protease PDZ domain [PF14685.8, score=23.4]} {Human: ENSG00000196118, CCDC189, coiled-coil domain containing 189, [Score=100, Expect=2e-22]} {Mouse: ENSMUSG00000057176, Ccdc189, coiled-coil domain containing 189, [Score=107, Expect=9e-25]} {Dmel: FBgn0024728, Slip1, [Score=61.6, Expect=3e-09]} {Celegans: WBGene00016846, C50F7.6, [Score=69.3, Expect=2e-12]} {Smed: dd_Smed_v6_12703_0_1, dd_Smed_v6_12703_0_1, [Score=117, Expect=6e-29]} {RNA1509_34490, RNA1509_53384} {RNA1310_23890, RNA1509_53384} {RNA1509_53384, RNA815_12270.1}