TomoSeq data search

Data search

Results for MligTC455_28464

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_28464	22	0.46	Mlig455_056104	Neo: - Age: -	SLIT3	Mlig455_056104 {REF} {Length: 5703} {Pfam: Leucine rich repeat [PF13855.8, score=108.0]; Leucine Rich repeats (2 copies) [PF12799.9, score=48.7]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=38.1]} {Human: ENSG00000184347, SLIT3, slit guidance ligand 3, [Score=65.9, Expect=5e-10]} {Mouse: ENSMUSG00000031558, Slit2, slit guidance ligand 2, [Score=67.8, Expect=8e-11]; ENSMUSG00000056427, Slit3, slit guidance ligand 3, [Score=66.2, Expect=3e-10]} {Dmel: FBgn0036494, Toll-6, [Score=76.3, Expect=2e-13]} {Celegans: WBGene00006593, tol-1, TOLl (Drosophila) family, [Score=86.7, Expect=9e-17]} {Smed: dd_Smed_v6_12111_0_1, dd_Smed_v6_12111_0_1, [Score=59.3, Expect=2e-08]} {RNA1509_51719} {RNA1310_4956.1} {RNA815_8922}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_28464

0.46

Mlig455_056104

Neo: -

Age: -

SLIT3

Mlig455_056104 {REF} {Length: 5703} {Pfam: Leucine rich repeat [PF13855.8, score=108.0]; Leucine Rich repeats (2 copies) [PF12799.9, score=48.7]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=38.1]} {Human: ENSG00000184347, SLIT3, slit guidance ligand 3, [Score=65.9, Expect=5e-10]} {Mouse: ENSMUSG00000031558, Slit2, slit guidance ligand 2, [Score=67.8, Expect=8e-11]; ENSMUSG00000056427, Slit3, slit guidance ligand 3, [Score=66.2, Expect=3e-10]} {Dmel: FBgn0036494, Toll-6, [Score=76.3, Expect=2e-13]} {Celegans: WBGene00006593, tol-1, TOLl (Drosophila) family, [Score=86.7, Expect=9e-17]} {Smed: dd_Smed_v6_12111_0_1, dd_Smed_v6_12111_0_1, [Score=59.3, Expect=2e-08]} {RNA1509_51719} {RNA1310_4956.1} {RNA815_8922}

Cumulative graph for MligTC455_28464

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_28464

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_28464	22	0.46	Mlig455_056104	Neo: - Age: -	SLIT3	1	-	-	-	-	1.000	-	Mlig455_056104 {REF} {Length: 5703} {Pfam: Leucine rich repeat [PF13855.8, score=108.0]; Leucine Rich repeats (2 copies) [PF12799.9, score=48.7]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=38.1]} {Human: ENSG00000184347, SLIT3, slit guidance ligand 3, [Score=65.9, Expect=5e-10]} {Mouse: ENSMUSG00000031558, Slit2, slit guidance ligand 2, [Score=67.8, Expect=8e-11]; ENSMUSG00000056427, Slit3, slit guidance ligand 3, [Score=66.2, Expect=3e-10]} {Dmel: FBgn0036494, Toll-6, [Score=76.3, Expect=2e-13]} {Celegans: WBGene00006593, tol-1, TOLl (Drosophila) family, [Score=86.7, Expect=9e-17]} {Smed: dd_Smed_v6_12111_0_1, dd_Smed_v6_12111_0_1, [Score=59.3, Expect=2e-08]} {RNA1509_51719} {RNA1310_4956.1} {RNA815_8922}
2.	MligTC455_00308	12	0.25	Mlig455_015810	Neo: - Age: -		0.975	-	-	-	-	0.975	-	Mlig455_015810 {REF} {Length: 490} {NoTransDecoderORF}
3.	MligTC455_22147	49	1.03	Mlig455_016021	Neo: - Age: -	XDH	0.959	-	-	-	-	0.959	-	Mlig455_016021 {REF} {Length: 1178} {Pfam: Molybdopterin-binding domain of aldehyde dehydrogenase [PF02738.20, score=363.8]; EF-hand domain pair [PF13499.8, score=113.4]; EF hand [PF00036.34, score=108.8]; [2Fe-2S] binding domain [PF01799.22, score=95.7]; EF-hand domain [PF13405.8, score=88.2]; EF-hand domain pair [PF13833.8, score=75.8]; EF hand [PF13202.8, score=73.1]; EF-hand domain [PF14658.8, score=47.8]; FAD binding domain in molybdopterin dehydrogenase [PF00941.23, score=23.1]; CO dehydrogenase flavoprotein C-terminal domain [PF03450.19, score=21.0]} {Human: ENSG00000158125, XDH, xanthine dehydrogenase, [Score=260, Expect=2e-70]; ENSG00000138356, AOX1, aldehyde oxidase 1, [Score=249, Expect=7e-67]} {Mouse: ENSMUSG00000024066, Xdh, xanthine dehydrogenase, [Score=273, Expect=9e-75]} {Dmel: FBgn0038349, AOX3, Aldehyde oxidase 3, [Score=284, Expect=1e-78]} {Celegans: WBGene00010083, xhd-1, [Score=268, Expect=3e-73]} {Smed: dd_Smed_v6_414_0_1, dd_Smed_v6_414_0_1, [Score=155, Expect=1e-43]} {RNA1310_43862} {RNA815_18862}
4.	MligTC455_57082	21	0.44	Mlig455_041284	Neo: - Age: -		0.958	-	-	-	-	0.958	-	Mlig455_041284 {REF} {Length: 307} {NoTransDecoderORF} {RNA1310_83793}
5.	MligTC455_05648	8	0.17	Mlig455_057483	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_057483 {REF} {Length: 393} {NoTransDecoderORF} {RNA1310_15033.1} {RNA815_13583}
6.	MligTC455_14963	43	0.89	Mlig455_051125	Neo: - Age: Down-Down-Up		0.951	-	-	-	-	0.951	-	Mlig455_051125 {REF} {Length: 1630} {RNA1310_22097} {RNA815_36852}