M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_28501

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_28501 38 0.79 Mlig455_070338

Neo: -

Age: -

 RCCD1 Mlig455_070338 {REF} {Length: 2163} {TRANSSPLICED} {Pfam: Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=90.4]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=52.4]} {Human: ENSG00000166965, RCCD1, RCC1 domain containing 1, [RH, Score=98.6, Expect=5e-23]} {Mouse: ENSMUSG00000038930, Rccd1, RCC1 domain containing 1, [RH, Score=99.4, Expect=2e-23]} {Dmel: FBgn0038917, CG6678, [RH, Score=89.0, Expect=8e-20]} {Celegans: WBGene00010768, K11D2.1, [RH, Score=78.2, Expect=6e-17]} {Smed: dd_Smed_v6_4912_0_1, dd_Smed_v6_4912_0_1, [RH, Score=95.5, Expect=2e-22]} {RNA1509_26302} {RNA1310_19707} {RNA815_10526}

Cumulative graph for MligTC455_28501

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.506 0.78 0.99985 1.00000
RegionR2 -0.271 0.78 0.99982 1.00000
RegionR3 -0.581 0.78 0.99982 1.00000
RegionR4 3.393 0.78 0.02372 0.11503
RegionR5 1.556 0.78 0.15979 0.42054
RegionR6 -0.471 0.78 0.99983 1.00000
RegionR7 -0.931 0.78 0.99987 1.00000
RegionR8 -1.188 0.78 0.99989 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.261 0.78 1.00000 1.00000
RegenerationR2 1.931 0.78 0.20312 0.64973
RegenerationR3 2.981 0.78 0.10320 0.51002
RegenerationR4 0.148 0.78 0.88034 1.00000
RegenerationR5 2.318 0.78 0.07365 0.42535
RegenerationR6 0.551 0.78 1.00000 1.00000
RegenerationBL 3.973 0.78 0.07929 0.32891
RegenerationTP 2.425 0.78 0.44427 0.86353


Genes with expression patterns similar to MligTC455_28501

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_28501 38 0.79 Mlig455_070338

Neo: -

Age: -

 RCCD1 3 1.000 1.000 - - 1.000 - Mlig455_070338 {REF} {Length: 2163} {TRANSSPLICED} {Pfam: Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=90.4]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=52.4]} {Human: ENSG00000166965, RCCD1, RCC1 domain containing 1, [RH, Score=98.6, Expect=5e-23]} {Mouse: ENSMUSG00000038930, Rccd1, RCC1 domain containing 1, [RH, Score=99.4, Expect=2e-23]} {Dmel: FBgn0038917, CG6678, [RH, Score=89.0, Expect=8e-20]} {Celegans: WBGene00010768, K11D2.1, [RH, Score=78.2, Expect=6e-17]} {Smed: dd_Smed_v6_4912_0_1, dd_Smed_v6_4912_0_1, [RH, Score=95.5, Expect=2e-22]} {RNA1509_26302} {RNA1310_19707} {RNA815_10526}
2. MligTC455_03917 31 0.65 Mlig455_018938

Neo: -

Age: -

 1.767 0.771 0.996 - - - - Mlig455_018938 {REF} {Length: 356} {NoTransDecoderORF} {RNA1509_12016} {RNA1310_130231} {RNA815_7574.1}
3. MligTC455_02267 4 0.08 Mlig455_053457

Neo: -

Age: -

 1.759 0.759 - - - 1.000 - Mlig455_053457 {REF} {Length: 2540} {RNA1310_49586}
4. MligTC455_36063 57 1.19 Mlig455_015640, Mlig455_020112, Mlig455_027622, Mlig455_045945, Mlig455_045973

Neo: Germline

Age: -

 1.756 0.796 0.960 - - - -

Mlig455_015640 {REF} {Length: 1064} {Pfam: Phage integrase family [PF00589.24, score=20.8]} {RNA1310_118313} {RNA815_64822}

Mlig455_020112 {REF} {Length: 1119} {RNA1509_19049} {RNA1310_107645} {RNA815_64822}

Mlig455_027622 {REF} {Length: 693} {RNA1509_19747} {RNA1310_107645} {RNA815_64822}

Mlig455_045945 {REF} {Length: 1439} {Pfam: Phage integrase family [PF00589.24, score=22.0]} {RNA1509_19747} {RNA1310_118313} {RNA815_64822}

Mlig455_045973 {REF} {Length: 1439} {Pfam: Phage integrase family [PF00589.24, score=22.0]} {RNA1509_19747} {RNA1310_118313} {RNA815_64822}
5. MligTC455_00216 2 0.05 Mlig455_047746

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_047746 {REF} {Length: 153} {NoTransDecoderORF} {RNA1310_105875}
6. MligTC455_00702 5 0.11 Mlig455_022717

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_022717 {REF} {Length: 175} {NoTransDecoderORF}
7. MligTC455_00784 28 0.57 Mlig455_018897, Mlig455_064936

Neo: -

Age: -

 1 - - - - 1.000 -

Mlig455_018897 {REF} {Length: 452}

Mlig455_064936 {REF} {Length: 493}
8. MligTC455_01106 5 0.11 Mlig455_066018

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_066018 {REF} {Length: 351} {NoTransDecoderORF}
9. MligTC455_01469 2 0.03 Mlig455_036766

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_036766 {REF} {Length: 1129} {Pfam: Peptidase family M13 [PF01431.23, score=33.5]} {Celegans: WBGene00013926, nep-1, Neprilysin-1, [Score=64.3, Expect=3e-12]}
10. MligTC455_01602 3 0.06 Mlig455_016103

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_016103 {REF} {Length: 250} {NoTransDecoderORF} {RNA1310_57401} {RNA815_41053}
11. MligTC455_01701 8 0.16 Mlig455_024347, Mlig455_024464

Neo: -

Age: -

 1 - - - - 1.000 -

Mlig455_024347 {REF} {Length: 553} {RNA1310_102456}

Mlig455_024464 {REF} {Length: 384} {RNA1310_102456}
12. MligTC455_01738 1 0.03 Mlig455_030947

Neo: -

Age: -

 TAS1R3 1 - - - - 1.000 - Mlig455_030947 {REF} {Length: 1409} {Pfam: Receptor family ligand binding region [PF01094.30, score=69.2]; Periplasmic binding protein [PF13458.8, score=23.7]} {Human: ENSG00000169962, TAS1R3, taste 1 receptor member 3, [Score=50.4, Expect=6e-06]} {Celegans: WBGene00003232, mgl-1, Probable metabotropic glutamate receptor mgl-1, [Score=51.2, Expect=1e-06]}
13. MligTC455_01898 4 0.08 Mlig455_047442

Neo: -

Age: -

 TRAF1 1 - - - - 1.000 - Mlig455_047442 {REF} {Length: 1230} {Human: ENSG00000056558, TRAF1, TNF receptor associated factor 1, [Score=87.0, Expect=4e-20]; ENSG00000076604, TRAF4, TNF receptor associated factor 4, [Score=85.5, Expect=5e-19]} {Mouse: ENSMUSG00000017386, Traf4, TNF receptor associated factor 4, [Score=86.7, Expect=1e-19]; ENSMUSG00000026875, Traf1, TNF receptor-associated factor 1, [Score=84.0, Expect=8e-19]} {Dmel: FBgn0026319, Traf4, TNF-receptor-associated factor 4, [Score=84.0, Expect=9e-19]} {Celegans: WBGene00022454, Y110A7A.2, [Score=44.7, Expect=1e-05]} {Smed: dd_Smed_v6_4368_0_1, dd_Smed_v6_4368_0_1, [Score=69.3, Expect=5e-14]} {RNA1310_103599}
14. MligTC455_02336 4 0.08 Mlig455_062499

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_062499 {REF} {Length: 759} {NoTransDecoderORF} {RNA1310_38166.2} {RNA815_45135}
15. MligTC455_02767 2 0.04 Mlig455_052279

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_052279 {REF} {Length: 1645}
16. MligTC455_03272 2 0.05 Mlig455_035008

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_035008 {REF} {Length: 248} {NoTransDecoderORF} {RNA1310_110267} {RNA815_64547}
17. MligTC455_04815 2 0.05 Mlig455_057741

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_057741 {REF} {Length: 2683} {Pfam: Glycine rich protein [PF12810.9, score=36.5]; PAN domain [PF00024.28, score=27.6]} {RNA1310_30682} {RNA815_62083}
18. MligTC455_05500 4 0.07 Mlig455_051714

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_051714 {REF} {Length: 696} {NoTransDecoderORF}
19. MligTC455_05817 8 0.16 Mlig455_044258

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_044258 {REF} {Length: 1297} {TRANSSPLICED} {RNA1509_55040} {RNA1310_55385.1} {RNA815_38567}
20. MligTC455_05818 7 0.15 Mlig455_044259

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_044259 {REF} {Length: 318} {NoTransDecoderORF} {RNA1509_55040} {RNA1310_81175} {RNA815_41251}
21. MligTC455_05832 4 0.07 Mlig455_041994

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_041994 {REF} {Length: 1129} {NoTransDecoderORF}
22. MligTC455_05851 28 0.59 Mlig455_001459

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_001459 {REF} {Length: 1971} {Pfam: Protein of unknown function (DUF1490) [PF07371.14, score=21.7]} {RNA1310_90690}
23. MligTC455_06151 1 0.03 Mlig455_011978, Mlig455_068346

Neo: -

Age: -

 ASIC3 1 - - - - 1.000 -

Mlig455_011978 {REF} {Length: 916} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=77.0]} {Human: ENSG00000213199, ASIC3, acid sensing ion channel subunit 3, [Score=52.8, Expect=2e-07]} {Mouse: ENSMUSG00000038276, Asic3, acid-sensing (proton-gated) ion channel 3, [Score=59.3, Expect=9e-10]} {Smed: dd_Smed_v6_16346_0_1, dd_Smed_v6_16346_0_1, [Score=68.9, Expect=2e-13]} {RNA1509_40586} {RNA1310_56164} {RNA815_37017}

Mlig455_068346 {REF} {Length: 2156} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=166.8]} {Human: ENSG00000213199, ASIC3, acid sensing ion channel subunit 3, [Score=53.1, Expect=1e-06]} {Mouse: ENSMUSG00000038276, Asic3, acid-sensing (proton-gated) ion channel 3, [Score=66.2, Expect=7e-11]} {Celegans: WBGene00006832, unc-105, Degenerin-like protein unc-105, [Score=50.1, Expect=5e-06]} {Smed: dd_Smed_v6_12878_0_1, dd_Smed_v6_12878_0_1, [Score=93.2, Expect=1e-19]} {RNA1310_56164} {RNA815_37017}
24. MligTC455_06191 3 0.06 Mlig455_067564

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_067564 {REF} {Length: 622}
25. MligTC455_06880 5 0.11 Mlig455_050142

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_050142 {REF} {Length: 413} {NoTransDecoderORF} {RNA1310_90348}
26. MligTC455_06914 4 0.08 Mlig455_007638

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_007638 {REF} {Length: 376} {NoTransDecoderORF} {RNA1310_79039}
27. MligTC455_07272 8 0.17 Mlig455_066606

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_066606 {REF} {Length: 1990} {Pfam: Glycine rich protein [PF12810.9, score=21.8]} {RNA1310_33363.1} {RNA815_25152}
28. MligTC455_07419 1 0.03 Mlig455_047086

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_047086 {REF} {Length: 1761} {Mouse: ENSMUSG00000043183, Simc1, SUMO-interacting motifs containing 1, [Score=57.0, Expect=3e-08]; ENSMUSG00000073490, Ifi207, interferon activated gene 207, [Score=54.3, Expect=2e-07]} {RNA1509_28642} {RNA1310_44996} {RNA815_55072.1}
29. MligTC455_07742 28 0.57 Mlig455_017093

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_017093 {REF} {Length: 464}
30. MligTC455_07935 2 0.03 Mlig455_030281

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_030281 {REF} {Length: 1403} {Celegans: WBGene00015646, mlt-10, [Score=137, Expect=7e-37]} {RNA1310_144446}
31. MligTC455_08655 13 0.27 Mlig455_045048

Neo: -

Age: -

Region-enriched R5: 1.573/0.03280

 1 - - - - 1.000 - Mlig455_045048 {REF} {Length: 2465} {RNA1509_24492} {RNA1310_38634} {RNA815_43546}
32. MligTC455_09372 2 0.05 Mlig455_036007

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_036007 {REF} {Length: 1412} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_28683} {RNA1310_86428} {RNA815_3064.1}
33. MligTC455_09696 2 0.03 Mlig455_009465, Mlig455_009475

Neo: -

Age: -

 1 - - - - 1.000 -

Mlig455_009465 {REF} {Length: 776} {Pfam: Lectin C-type domain [PF00059.23, score=35.3]} {Smed: dd_Smed_v6_32483_0_1, dd_Smed_v6_32483_0_1, [Score=67.4, Expect=2e-13]} {RNA1310_33496.1} {RNA815_23317}

Mlig455_009475 {REF} {Length: 776} {Pfam: Lectin C-type domain [PF00059.23, score=35.3]} {Smed: dd_Smed_v6_32483_0_1, dd_Smed_v6_32483_0_1, [Score=67.4, Expect=2e-13]} {RNA1310_33496.1} {RNA815_23317}
34. MligTC455_10533 21 0.43 Mlig455_022772

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.312

 1 - - - - 1.000 - Mlig455_022772 {REF} {Length: 801} {NoTransDecoderORF} {RNA1509_8810} {RNA1310_26349} {RNA815_30479}
35. MligTC455_10794 1 0.02 Mlig455_033910

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_033910 {REF} {Length: 233} {NoTransDecoderORF}
36. MligTC455_10939 1 0.02 Mlig455_019856

Neo: -

Age: logFC(26M/2M)=0.597

 PHEX 1 - - - - 1.000 - Mlig455_019856 {REF} {Length: 3774} {Pfam: Peptidase family M13 [PF05649.15, score=80.2]; Peptidase family M13 [PF01431.23, score=21.3]; Glycine rich protein [PF12810.9, score=18.7]} {Human: ENSG00000102174, PHEX, phosphate regulating endopeptidase homolog X-linked, [Score=67.8, Expect=8e-11]} {Mouse: ENSMUSG00000057457, Phex, phosphate regulating endopeptidase homolog, X-linked, [Score=65.5, Expect=2e-10]} {Celegans: WBGene00020230, nep-2, Neprilysin-2, [Score=57.0, Expect=6e-08]} {RNA1509_38290} {RNA1310_7425} {RNA815_13309}
37. MligTC455_11710 3 0.07 Mlig455_012194

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_012194 {REF} {Length: 1677} {RNA1310_23350.1}
38. MligTC455_11814 2 0.04 Mlig455_013680

Neo: -

Age: Up-Down-Up

 PUS3 1 - - - - 1.000 - Mlig455_013680 {REF} {Length: 1816} {TRANSSPLICED} {Pfam: tRNA pseudouridine synthase [PF01416.22, score=93.5]} {Human: ENSG00000110060, PUS3, pseudouridylate synthase 3, [RH, Score=237, Expect=3e-72]} {Mouse: ENSMUSG00000032103, Pus3, pseudouridine synthase 3, [RH, Score=246, Expect=6e-76]} {Dmel: FBgn0034703, CG3045, [RH, Score=215, Expect=6e-64]} {Celegans: WBGene00006473, tag-124, Probable tRNA pseudouridine synthase tag-124, [RH, Score=193, Expect=1e-56]} {Smed: dd_Smed_v6_13034_0_4, dd_Smed_v6_13034_0_4, [RH, Score=256, Expect=5e-81]} {RNA1509_17604} {RNA1310_18095} {RNA815_6512}
39. MligTC455_12051 18 0.37 Mlig455_041618, Mlig455_041637

Neo: -

Age: -

 1 - - - - 1.000 -

Mlig455_041618 {REF} {Length: 155} {NoTransDecoderORF} {RNA1310_52950} {RNA815_47525}

Mlig455_041637 {REF} {Length: 768} {NoTransDecoderORF} {RNA1310_52950} {RNA815_47525}
40. MligTC455_12636 11 0.22 Mlig455_053922

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_053922 {REF} {Length: 206} {NoTransDecoderORF} {RNA1310_108681.2}
41. MligTC455_13557 20 0.43 Mlig455_020342, Mlig455_041283

Neo: -

Age: -

 ASIC1 1 - - - - 1.000 -

Mlig455_020342 {REF} {Length: 4002} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=135.3]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=67.4, Expect=2e-11]} {Mouse: ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=59.3, Expect=4e-09]} {Celegans: WBGene00003174, mec-10, Degenerin mec-10, [Score=65.1, Expect=3e-11]} {Smed: dd_Smed_v6_12037_0_1, dd_Smed_v6_12037_0_1, [Score=72.4, Expect=1e-13]} {RNA1509_33503} {RNA1310_41267.1} {RNA815_38083}

Mlig455_041283 {REF} {Length: 3377} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=207.2]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=67.4, Expect=4e-11]} {Mouse: ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=60.1, Expect=7e-09]} {Celegans: WBGene00003174, mec-10, Degenerin mec-10, [Score=66.2, Expect=5e-11]} {Smed: dd_Smed_v6_12037_0_1, dd_Smed_v6_12037_0_1, [Score=112, Expect=8e-26]} {RNA1509_33503} {RNA1310_18874} {RNA815_38083}
42. MligTC455_14079 78 1.63 Mlig455_003125

Neo: -

Age: Down-Up-Up

Region-enriched R2: 4.842/0.03184

 SLC25A15 1 - - - - 1.000 - Mlig455_003125 {REF} {Length: 1972} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=194.5]} {Human: ENSG00000102743, SLC25A15, solute carrier family 25 member 15, [RH, Score=273, Expect=1e-90]} {Mouse: ENSMUSG00000031482, Slc25a15, solute carrier family 25 (mitochondrial carrier ornithine transporter), member 15, [RH, Score=273, Expect=6e-91]} {Dmel: FBgn0030218, CG1628, [RH, Score=328, Expect=4e-110]} {Celegans: WBGene00020422, T10F2.2, [RH, Score=320, Expect=1e-109]} {Smed: dd_Smed_v6_1662_0_1, dd_Smed_v6_1662_0_1, [RH, Score=332, Expect=5e-114]} {RNA1509_16762} {RNA1310_11980.1} {RNA815_5939}
43. MligTC455_14432 2 0.04 Mlig455_042055

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_042055 {REF} {Length: 1944}
44. MligTC455_15764 3 0.06 Mlig455_069556

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_069556 {REF} {Length: 976} {RNA1310_81210.1}
45. MligTC455_17193 104 2.17 Mlig455_067657

Neo: Irradiation

Age: Down-Up-Down

Region-enriched R5: 4.829/0.00000

 HRH1 1 - - - - 1.000 - Mlig455_067657 {REF} {Length: 1665} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=238.0]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=32.7]; Olfactory receptor [PF13853.8, score=29.4]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=26.0]} {Human: ENSG00000196639, HRH1, histamine receptor H1, [Score=258, Expect=5e-80]} {Mouse: ENSMUSG00000053004, Hrh1, histamine receptor H1, [Score=259, Expect=1e-80]} {Dmel: FBgn0053517, Dop2R, Dopamine 2-like receptor, [Score=174, Expect=5e-47]} {Celegans: WBGene00017157, tyra-2, Tyramine receptor tyra-2, [Score=171, Expect=1e-47]} {Smed: dd_Smed_v6_15040_0_1, dd_Smed_v6_15040_0_1, [Score=170, Expect=6e-47]} {RNA1509_53354} {RNA1310_56071} {RNA815_31150}
46. MligTC455_17934 2 0.05 Mlig455_006108

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_006108 {REF} {Length: 2029} {TRANSSPLICED} {Pfam: Thioesterase-like superfamily [PF13622.8, score=67.5]} {Celegans: WBGene00017781, F25E2.3, [Score=58.5, Expect=2e-09]} {RNA1310_25213} {RNA815_49205}
47. MligTC455_18555 27 0.57 Mlig455_016169, Mlig455_044584

Neo: -

Age: -

 1 - - - - 1.000 -

Mlig455_016169 {REF} {Length: 407} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_96844}

Mlig455_044584 {REF} {Length: 407} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_96844}
48. MligTC455_20783 3 0.06 Mlig455_026571

Neo: Int S/G2/M

Age: -

 1 - - - - 1.000 - Mlig455_026571 {REF} {Length: 1903} {NoTransDecoderORF} {RNA1509_54874} {RNA1310_84855} {RNA815_8730.1}
49. MligTC455_22338 22 0.46 Mlig455_004826, Mlig455_004905

Neo: -

Age: -

 1 - - - - 1.000 -

Mlig455_004826 {REF} {Length: 765} {NoTransDecoderORF} {RNA1310_132950} {RNA815_10316}

Mlig455_004905 {REF} {Length: 764} {NoTransDecoderORF} {RNA1310_132950} {RNA815_10316}
50. MligTC455_25788 37 0.77 Mlig455_014675

Neo: -

Age: -

Region-enriched R5: 3.692/0.00587
Region-enriched R4: 3.141/0.01978

 1 - - - - 1.000 - Mlig455_014675 {REF} {Length: 909} {RNA1509_22707} {RNA1310_61500} {RNA815_24119.1}
51. MligTC455_26750 2 0.05 Mlig455_008889

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.377

 TCF7L1 1 - - - - 1.000 - Mlig455_008889 {REF} {Length: 2681} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=75.1]; HMG-box domain [PF09011.12, score=32.5]} {Human: ENSG00000152284, TCF7L1, transcription factor 7 like 1, [RH, Score=150, Expect=8e-38]; ENSG00000138795, LEF1, lymphoid enhancer binding factor 1, [RH, Score=148, Expect=2e-38]} {Mouse: ENSMUSG00000055799, Tcf7l1, transcription factor 7 like 1 (T cell specific, HMG box), [RH, Score=151, Expect=2e-38]; ENSMUSG00000027985, Lef1, lymphoid enhancer binding factor 1, [RH, Score=148, Expect=3e-39]} {Dmel: FBgn0085432, pan, pangolin, [RH, Score=151, Expect=1e-37]} {Celegans: WBGene00004077, pop-1, [Score=107, Expect=1e-24]} {Smed: dd_Smed_v6_9140_0_1, dd_Smed_v6_9140_0_1, [RH, Score=198, Expect=1e-53]} {RNA1509_11661} {RNA1310_5451.3} {RNA815_19185}
52. MligTC455_27296 12 0.25 Mlig455_061489

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_061489 {REF} {Length: 3497} {RNA1509_47318} {RNA1310_64020} {RNA815_2914.1}
53. MligTC455_27321 7 0.14 Mlig455_024078

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_024078 {REF} {Length: 1366} {NoTransDecoderORF} {RNA1509_8928} {RNA1310_63389} {RNA815_7652.1}
54. MligTC455_27376 507 10.57 Mlig455_023327

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_023327 {REF} {Length: 1687} {NoTransDecoderORF} {RNA1509_32297} {RNA1310_63447} {RNA815_9685.1}
55. MligTC455_28776 1 0.03 Mlig455_054184

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_054184 {REF} {Length: 2769} {Pfam: Mab-21 protein [PF03281.16, score=39.6]} {RNA1509_27730} {RNA1310_4721} {RNA815_5358.1}
56. MligTC455_36613 82 1.7 Mlig455_048390

Neo: -

Age: Up-Down-Down

 RNF13 1 - - - - 1.000 - Mlig455_048390 {REF} {Length: 3063} {TRANSSPLICED} {Pfam: RING-like zinc finger [PF17123.7, score=47.7]; Ring finger domain [PF13639.8, score=46.8]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=32.1]; zinc-RING finger domain [PF14634.8, score=26.6]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=25.5]; RING-type zinc-finger [PF13445.8, score=25.2]; RING-H2 zinc finger domain [PF12678.9, score=25.1]; Prokaryotic RING finger family 4 [PF14447.8, score=24.8]; PA domain [PF02225.24, score=23.2]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=19.6]} {Human: ENSG00000082996, RNF13, ring finger protein 13, [RH, Score=192, Expect=2e-56]} {Mouse: ENSMUSG00000036503, Rnf13, ring finger protein 13, [RH, Score=195, Expect=8e-58]} {Dmel: FBgn0037442, godzilla, godzilla E3 ubiquitin protein ligase, [RH, Score=152, Expect=1e-40]} {Celegans: WBGene00007666, C18B12.4, [RH, Score=140, Expect=1e-36]} {Smed: dd_Smed_v6_10741_0_2, dd_Smed_v6_10741_0_2, [RH, Score=84.7, Expect=8e-18]} {RNA1509_13438} {RNA1310_21318.1} {RNA815_6447}
57. MligTC455_39895 28 0.58 Mlig455_013091

Neo: -

Age: -

 PAK2 1 - - - - 1.000 - Mlig455_013091 {REF} {Length: 2700} {Pfam: Protein kinase domain [PF00069.27, score=218.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=159.2]; P21-Rho-binding domain [PF00786.30, score=30.8]; Kinase-like [PF14531.8, score=28.4]; ABC1 atypical kinase-like domain [PF03109.18, score=28.0]; Phosphotransferase enzyme family [PF01636.25, score=20.7]} {Human: ENSG00000180370, PAK2, p21 (RAC1) activated kinase 2, [Score=300, Expect=8e-96]; ENSG00000149269, PAK1, p21 (RAC1) activated kinase 1, [Score=300, Expect=1e-95]} {Mouse: ENSMUSG00000030774, Pak1, p21 (RAC1) activated kinase 1, [Score=300, Expect=6e-96]; ENSMUSG00000022781, Pak2, p21 (RAC1) activated kinase 2, [Score=294, Expect=8e-94]} {Dmel: FBgn0267698, Pak, p21-activated kinase, [Score=275, Expect=6e-85]} {Celegans: WBGene00003144, max-2, Serine/threonine-protein kinase max-2, [Score=266, Expect=1e-86]} {Smed: dd_Smed_v6_1765_0_1, dd_Smed_v6_1765_0_1, [Score=323, Expect=1e-106]} {RNA1509_26775} {RNA1310_16860.1} {RNA815_3384}
58. MligTC455_41340 4 0.08 Mlig455_021121

Neo: -

Age: -

 MUC22 1 - - - - 1.000 - Mlig455_021121 {REF} {Length: 2504} {TRANSSPLICED} {Human: ENSG00000261272, MUC22, mucin 22, [Score=171, Expect=4e-43]} {Mouse: ENSMUSG00000048191, Muc6, mucin 6, gastric, [Score=149, Expect=3e-36]} {Dmel: FBgn0053265, Muc68E, Mucin 68E, [Score=157, Expect=7e-39]} {Celegans: WBGene00019146, H02F09.3, [Score=101, Expect=9e-22]} {RNA1310_34392} {RNA815_25763}
59. MligTC455_41801 10 0.21 Mlig455_053511

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_053511 {REF} {Length: 1595} {NoTransDecoderORF}
60. MligTC455_42069 50 1.04 Mlig455_039288, Mlig455_043364, Mlig455_058820

Neo: -

Age: -

 1 - - - - 1.000 -

Mlig455_039288 {REF} {Length: 2043} {TRANSSPLICED} {Pfam: Kyakuja-Dileera-Zisupton transposase [PF18758.3, score=136.7]} {RNA1509_45715} {RNA1310_9408.1} {RNA815_8875}

Mlig455_043364 {REF} {Length: 2937} {TRANSSPLICED} {Pfam: Kyakuja-Dileera-Zisupton transposase [PF18758.3, score=136.7]} {RNA1509_45715} {RNA1310_9408.1} {RNA815_8875}

Mlig455_058820 {REF} {Length: 2905} {TRANSSPLICED} {Pfam: Kyakuja-Dileera-Zisupton transposase [PF18758.3, score=137.0]} {RNA1509_45715} {RNA1310_9408.1} {RNA815_8875}
61. MligTC455_42129 3 0.05 Mlig455_014745

Neo: -

Age: logFC(26M/2M)=1.145

 MRC1 1 - - - - 1.000 - Mlig455_014745 {REF} {Length: 1544} {Pfam: Lectin C-type domain [PF00059.23, score=99.4]; UL45 protein, carbohydrate-binding C-type lectin-like [PF05473.14, score=21.9]} {Human: ENSG00000260314, MRC1, mannose receptor C-type 1, [Score=88.6, Expect=3e-18]} {Mouse: ENSMUSG00000002341, Ncan, neurocan, [Score=73.6, Expect=2e-13]} {Celegans: WBGene00012253, clec-50, C-type LECtin, [Score=63.9, Expect=3e-11]} {Smed: dd_Smed_v6_2649_0_2, dd_Smed_v6_2649_0_2, [Score=48.5, Expect=6e-06]} {RNA1509_35559} {RNA1310_32168.1} {RNA815_14861}
62. MligTC455_42292 23 0.48 Mlig455_048551

Neo: -

Age: Down-Up-Down

 PIP5K1A 1 - - - - 1.000 - Mlig455_048551 {REF} {Length: 2646} {TRANSSPLICED} {Pfam: Phosphatidylinositol-4-phosphate 5-Kinase [PF01504.20, score=270.9]} {Human: ENSG00000143398, PIP5K1A, phosphatidylinositol-4-phosphate 5-kinase type 1 alpha, [RH, Score=421, Expect=1e-141]; ENSG00000107242, PIP5K1B, phosphatidylinositol-4-phosphate 5-kinase type 1 beta, [RH, Score=410, Expect=3e-138]} {Mouse: ENSMUSG00000028126, Pip5k1a, phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha, [RH, Score=417, Expect=2e-140]; ENSMUSG00000034902, Pip5k1c, phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma, [RH, Score=416, Expect=9e-139]; ENSMUSG00000024867, Pip5k1b, phosphatidylinositol-4-phosphate 5-kinase, type 1 beta, [RH, Score=410, Expect=9e-138]} {Dmel: FBgn0016984, sktl, skittles, [Score=439, Expect=6e-146]} {Celegans: WBGene00004087, ppk-1, PIP Kinase, [Score=409, Expect=6e-137]} {Smed: dd_Smed_v6_7632_0_3, dd_Smed_v6_7632_0_3, [Score=417, Expect=3e-141]} {RNA1509_26123} {RNA1310_13009.1, RNA1509_26123} {RNA1509_26123, RNA815_4999.1}
63. MligTC455_42976 13 0.27 Mlig455_069068

Neo: -

Age: Down-Up-Down

 1 - - - - 1.000 - Mlig455_069068 {REF} {Length: 2728} {TRANSSPLICED} {RNA1509_25715} {RNA1310_11361} {RNA815_11628}
64. MligTC455_48698 13 0.27 Mlig455_068308

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_068308 {REF} {Length: 681} {NoTransDecoderORF}
65. MligTC455_48871 17 0.34 Mlig455_044787, Mlig455_055570

Neo: -

Age: -

 1 - - - - 1.000 -

Mlig455_044787 {REF} {Length: 284} {NoTransDecoderORF} {RNA1310_50022}

Mlig455_055570 {REF} {Length: 557} {NoTransDecoderORF} {RNA1310_50022}
66. MligTC455_51197 25 0.53 Mlig455_026069, Mlig455_037313

Neo: -

Age: Up-Down-Up

 1 - - - - 1.000 -

Mlig455_026069 {REF} {Length: 3320} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=63.0]} {RNA1310_7738.1} {RNA815_28239}

Mlig455_037313 {REF} {Length: 3245} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=63.1]} {RNA1310_7738.1} {RNA815_28239}
67. MligTC455_54857 3 0.05 Mlig455_062025

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_062025 {REF} {Length: 193} {NoTransDecoderORF}
68. MligTC455_55312 1 0.03 Mlig455_034362

Neo: -

Age: -

 TAS1R3 1 - - - - 1.000 - Mlig455_034362 {REF} {Length: 1409} {Pfam: Receptor family ligand binding region [PF01094.30, score=69.8]; Periplasmic binding protein [PF13458.8, score=23.3]} {Human: ENSG00000169962, TAS1R3, taste 1 receptor member 3, [Score=50.4, Expect=5e-06]} {Celegans: WBGene00003232, mgl-1, Probable metabotropic glutamate receptor mgl-1, [Score=49.7, Expect=4e-06]}
69. MligTC455_55860 1 0.02 Mlig455_007137

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_007137 {REF} {Length: 895} {Pfam: Alpha-L-arabinofuranosidase B (ABFB) domain [PF05270.15, score=30.0]} {RNA1310_99379}
70. MligTC455_55890 2 0.04 Mlig455_030568

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_030568 {REF} {Length: 654} {Celegans: WBGene00009311, mltn-1, MLt-TeN (Mlt-10) related, [Score=55.5, Expect=5e-09]}
71. MligTC455_56310 3 0.07 Mlig455_052416

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_052416 {REF} {Length: 417} {Pfam: Tetracyclin repressor-like, C-terminal domain [PF17935.3, score=25.1]; Autophagy protein ATG17-like domain [PF04108.14, score=19.9]; Mechanosensitive ion channel porin domain [PF12795.9, score=18.8]}
72. MligTC455_56435 2 0.03 Mlig455_028750

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_028750 {REF} {Length: 415} {NoTransDecoderORF}
73. MligTC455_28839 4 0.08 Mlig455_005360

Neo: -

Age: -

 0.999 - - - - 0.999 - Mlig455_005360 {REF} {Length: 3937} {RNA1509_44518} {RNA1310_34830.1} {RNA815_18494}
74. MligTC455_38222 10 0.21 Mlig455_020659

Neo: -

Age: -

 0.999 - - - - 0.999 - Mlig455_020659 {REF} {Length: 1868} {NoTransDecoderORF} {RNA1509_57328} {RNA1310_4461} {RNA815_2341}
75. MligTC455_55712 4 0.07 Mlig455_031873

Neo: -

Age: -

 0.999 - - - - 0.999 - Mlig455_031873 {REF} {Length: 1538} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=54.9]; Zinc knuckle [PF00098.25, score=24.8]; Aspartyl protease [PF13650.8, score=21.0]; gag-polyprotein putative aspartyl protease [PF13975.8, score=20.7]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=99.0, Expect=1e-21]} {RNA1509_44038} {RNA1310_11212} {RNA815_52853}
76. MligTC455_09661 16 0.32 Mlig455_069854

Neo: -

Age: -

 0.998 - - - - 0.998 - Mlig455_069854 {REF} {Length: 2803} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=54.1]; Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=36.5]; Endonuclease-reverse transcriptase [PF14529.8, score=31.2]; PHD-finger [PF00628.31, score=19.8]} {RNA1310_54800}
77. MligTC455_22414 8 0.17 Mlig455_005652

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.420

 RAB1A 0.998 - - - - 0.998 - Mlig455_005652 {REF} {Length: 6196} {Pfam: Ras family [PF00071.24, score=594.6]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=396.2]; ADP-ribosylation factor family [PF00025.23, score=204.9]; 50S ribosome-binding GTPase [PF01926.25, score=113.0]; Elongation factor Tu GTP binding domain [PF00009.29, score=68.0]; RsgA GTPase [PF03193.18, score=65.7]; Gtr1/RagA G protein conserved region [PF04670.14, score=55.6]; AAA domain [PF13401.8, score=53.4]; AAA ATPase domain [PF13191.8, score=51.3]; Bacterial TniB protein [PF05621.13, score=45.2]; NACHT domain [PF05729.14, score=45.1]; P-loop containing region of AAA domain [PF13555.8, score=42.4]; MCM P-loop domain [PF00493.25, score=42.2]; P-loop containing dynein motor region [PF12775.9, score=41.1]; ABC transporter [PF00005.29, score=40.7]; AAA domain (dynein-related subfamily) [PF07728.16, score=39.9]; Caspase recruitment domain [PF00619.23, score=36.2]; AAA domain [PF13671.8, score=34.2]; Sigma-54 interaction domain [PF00158.28, score=31.0]; AAA domain [PF13479.8, score=30.1]; Protein of unknown function (DUF815) [PF05673.15, score=29.7]; Septin [PF00735.20, score=29.3]; RNA helicase [PF00910.24, score=26.7]; Ethanolamine utilisation - propanediol utilisation [PF10662.11, score=25.6]; G-protein alpha subunit [PF00503.22, score=25.4]; Conserved hypothetical ATP binding protein [PF03029.19, score=24.4]; Family of unknown function (DUF5838) [PF19156.2, score=23.0]; Threonylcarbamoyl adenosine biosynthesis protein TsaE [PF02367.19, score=22.5]; SGNH domain (fused to AT3 domains) [PF19040.2, score=21.8]; Interferon-inducible GTPase (IIGP) [PF05049.15, score=21.4]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=21.0]; Mitochondrial ribosomal death-associated protein 3 [PF10236.11, score=18.7]} {Human: ENSG00000138069, RAB1A, RAB1A, member RAS oncogene family, [Score=163, Expect=4e-45]; ENSG00000174903, RAB1B, RAB1B, member RAS oncogene family, [Score=162, Expect=8e-45]; ENSG00000111737, RAB35, RAB35, member RAS oncogene family, [Score=155, Expect=2e-42]} {Mouse: ENSMUSG00000020149, Rab1a, RAB1A, member RAS oncogene family, [Score=164, Expect=2e-45]; ENSMUSG00000024870, Rab1b, RAB1B, member RAS oncogene family, [Score=162, Expect=6e-45]} {Dmel: FBgn0285937, Rab1, [Score=167, Expect=1e-46]} {Celegans: WBGene00004266, rab-1, RAB family, [Score=162, Expect=4e-45]} {Smed: dd_Smed_v6_488_0_1, dd_Smed_v6_488_0_1, [Score=166, Expect=1e-46]} {RNA1509_44043} {RNA1310_2946} {RNA815_567}
78. MligTC455_18819 6 0.13 Mlig455_027535

Neo: -

Age: -

 0.996 - - - - 0.996 - Mlig455_027535 {REF} {Length: 226} {NoTransDecoderORF} {RNA1509_37388} {RNA1310_340.1} {RNA815_14498.2}
79. MligTC455_57100 1 0.02 Mlig455_003321

Neo: -

Age: -

 0.996 - 0.996 - - - - Mlig455_003321 {REF} {Length: 597} {NoTransDecoderORF} {RNA1310_77108}
80. MligTC455_05344 31 0.64 Mlig455_034283, Mlig455_060101

Neo: -

Age: -

 PIF1 0.995 - 0.995 - - - -

Mlig455_034283 {REF} {Length: 906} {Pfam: PIF1-like helicase [PF05970.16, score=96.0]; UvrD-like helicase C-terminal domain [PF13538.8, score=30.1]; Helicase [PF02689.16, score=19.1]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=82.4, Expect=2e-17]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=81.3, Expect=4e-17]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=58.5, Expect=1e-09]} {Celegans: WBGene00021577, Y46B2A.2, [Score=139, Expect=2e-37]} {Smed: dd_Smed_v6_19520_0_6, dd_Smed_v6_19520_0_6, [Score=74.7, Expect=2e-17]} {RNA1310_72478}

Mlig455_060101 {REF} {Length: 2472} {Pfam: PIF1-like helicase [PF05970.16, score=341.4]; AAA domain [PF13604.8, score=51.8]; UvrD-like helicase C-terminal domain [PF13538.8, score=27.1]; AAA domain [PF13245.8, score=21.4]; Helicase [PF02689.16, score=17.1]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=128, Expect=4e-30]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=123, Expect=1e-28]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=111, Expect=5e-25]} {Celegans: WBGene00019136, F59H6.5, [Score=301, Expect=2e-87]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=114, Expect=3e-26]} {RNA1310_72478}
81. MligTC455_20832 9 0.18 Mlig455_064272

Neo: -

Age: Up-Down-Down

 NYNRIN 0.994 - - - - 0.994 - Mlig455_064272 {REF} {Length: 3385} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=76.0]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=72.0]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=46.6]; Integrase core domain [PF00665.28, score=29.4]; Zinc knuckle [PF00098.25, score=25.0]; Retroviral aspartyl protease [PF00077.22, score=19.9]; Aspartyl protease [PF13650.8, score=19.4]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=62.4, Expect=5e-09]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=214, Expect=5e-57]} {RNA1509_52470} {RNA1310_7413} {RNA815_28741}
82. MligTC455_04381 14 0.28 Mlig455_048984, Mlig455_049000

Neo: -

Age: -

 0.993 - - - - 0.993 -

Mlig455_048984 {REF} {Length: 259} {NoTransDecoderORF} {RNA1509_46403} {RNA1310_8957} {RNA815_3385.1}

Mlig455_049000 {REF} {Length: 161} {NoTransDecoderORF} {RNA1509_46403} {RNA1310_8957} {RNA815_1210.1}
83. MligTC455_49009 7 0.15 Mlig455_022948

Neo: -

Age: -

 0.993 - 0.993 - - - - Mlig455_022948 {REF} {Length: 970} {NoTransDecoderORF} {RNA1509_12083} {RNA1310_107943} {RNA815_4177.1}
84. MligTC455_16344 8 0.17 Mlig455_049962

Neo: -

Age: -

 0.992 - - - - 0.992 - Mlig455_049962 {REF} {Length: 3400} {TRANSSPLICED} {Pfam: Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=143.4]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=27.8]} {RNA1509_31227} {RNA1310_23862.1} {RNA815_8951}
85. MligTC455_00805 9 0.18 Mlig455_050616

Neo: -

Age: -

 0.991 - - - - 0.991 - Mlig455_050616 {REF} {Length: 340} {NoTransDecoderORF} {RNA1310_103921} {RNA815_53976}
86. MligTC455_05798 6 0.12 Mlig455_064077

Neo: -

Age: -

 0.991 - - - - 0.991 - Mlig455_064077 {REF} {Length: 286} {NoTransDecoderORF} {RNA1509_15229} {RNA1310_12845.1}
87. MligTC455_12796 7 0.14 Mlig455_022864

Neo: -

Age: -

 0.991 - - - - 0.991 - Mlig455_022864 {REF} {Length: 432} {NoTransDecoderORF} {RNA1310_62625}
88. MligTC455_30754 12 0.25 Mlig455_007877

Neo: Germline

Age: Down-Down-Down

 NYNRIN 0.991 - - - - 0.991 - Mlig455_007877 {REF} {Length: 4733} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=123.3]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=119.1]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=83.4]; Integrase zinc binding domain [PF17921.3, score=74.9]; SCAN domain [PF02023.19, score=50.0]; Retroviral aspartyl protease [PF00077.22, score=26.9]; Integrase core domain [PF00665.28, score=21.8]; Integrase core domain [PF13683.8, score=19.9]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=105, Expect=6e-22]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=116, Expect=2e-25]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=288, Expect=7e-85]} {RNA1509_37360} {RNA1310_1636} {RNA815_16797}
89. MligTC455_38463 19 0.39 Mlig455_057313

Neo: -

Age: -

 0.991 - - - - 0.991 - Mlig455_057313 {REF} {Length: 937} {NoTransDecoderORF} {RNA1509_25022} {RNA1310_113003} {RNA815_23623}
90. MligTC455_10123 149 3.1 Mlig455_038373

Neo: -

Age: -

 SIK3 0.99 - - - - 0.990 - Mlig455_038373 {REF} {Length: 5401} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=229.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=121.0]; Kinase-like [PF14531.8, score=27.2]; Phosphotransferase enzyme family [PF01636.25, score=18.9]} {Human: ENSG00000160584, SIK3, SIK family kinase 3, [Score=327, Expect=1e-95]; ENSG00000170145, SIK2, salt inducible kinase 2, [Score=318, Expect=8e-95]} {Mouse: ENSMUSG00000034135, Sik3, SIK family kinase 3, [Score=328, Expect=3e-96]; ENSMUSG00000037112, Sik2, salt inducible kinase 2, [Score=320, Expect=1e-95]} {Dmel: FBgn0025625, Sik2, Salt-inducible kinase 2, [Score=323, Expect=2e-94]} {Celegans: WBGene00003916, par-1, Serine/threonine-protein kinase par-1, [Score=290, Expect=2e-84]} {Smed: dd_Smed_v6_8348_0_2, dd_Smed_v6_8348_0_2, [RH, Score=373, Expect=1e-112]} {RNA1509_14551, RNA1509_56378} {RNA1310_21972.1, RNA1509_14551, RNA1509_56378} {RNA1509_14551, RNA1509_56378, RNA815_29595}
91. MligTC455_42359 50 1.05 Mlig455_006820, Mlig455_038432, Mlig455_038569

Neo: -

Age: Up-Down-Up

 0.99 - - - - 0.990 -

Mlig455_006820 {REF} {Length: 1439} {Smed: dd_Smed_v6_15433_0_1, dd_Smed_v6_15433_0_1, [Score=58.9, Expect=1e-09]} {RNA1310_86618}

Mlig455_038432 {REF} {Length: 5209} {Smed: dd_Smed_v6_15433_0_1, dd_Smed_v6_15433_0_1, [Score=68.2, Expect=3e-11]} {RNA1509_41513} {RNA1310_34666} {RNA815_60037}

Mlig455_038569 {REF} {Length: 716} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_46306}
92. MligTC455_26569 11 0.22 Mlig455_009322, Mlig455_022836, Mlig455_025092, Mlig455_025097, Mlig455_052914, Mlig455_054666

Neo: Germline

Age: -

 PIF1 0.989 - - - - 0.989 -

Mlig455_009322 {REF} {Length: 644} {Pfam: PIF1-like helicase [PF05970.16, score=83.4]; UvrD-like helicase C-terminal domain [PF13538.8, score=29.1]; Helicase [PF02689.16, score=18.2]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=59.3, Expect=4e-10]} {Celegans: WBGene00021577, Y46B2A.2, [Score=138, Expect=2e-37]} {Smed: dd_Smed_v6_19520_0_6, dd_Smed_v6_19520_0_6, [Score=79.7, Expect=9e-20]} {RNA1509_16163} {RNA1310_14011} {RNA815_50029}

Mlig455_022836 {REF} {Length: 5858} {Pfam: PIF1-like helicase [PF05970.16, score=333.2]; Helitron helicase-like domain at N-terminus [PF14214.8, score=174.2]; AAA domain [PF13604.8, score=47.7]; UvrD-like helicase C-terminal domain [PF13538.8, score=25.5]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=114, Expect=4e-25]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=110, Expect=3e-24]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=116, Expect=5e-26]} {Celegans: WBGene00018020, F33H12.6, [RH, Score=740, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=110, Expect=3e-24]} {RNA1509_16163} {RNA1310_2680.1} {RNA815_356.1}

Mlig455_025092 {REF} {Length: 6768} {Pfam: PIF1-like helicase [PF05970.16, score=330.6]; Helitron helicase-like domain at N-terminus [PF14214.8, score=175.4]; AAA domain [PF13604.8, score=46.1]; UvrD-like helicase C-terminal domain [PF13538.8, score=25.7]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=114, Expect=5e-25]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=109, Expect=9e-24]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=116, Expect=5e-26]} {Celegans: WBGene00018020, F33H12.6, [RH, Score=741, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=110, Expect=1e-24]} {RNA1509_16163} {RNA1310_2680.1, RNA1509_16163} {RNA1509_16163, RNA815_356.1}

Mlig455_025097 {REF} {Length: 4900} {Pfam: PIF1-like helicase [PF05970.16, score=330.6]; Helitron helicase-like domain at N-terminus [PF14214.8, score=175.4]; AAA domain [PF13604.8, score=46.1]; UvrD-like helicase C-terminal domain [PF13538.8, score=25.7]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=114, Expect=5e-25]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=109, Expect=9e-24]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=116, Expect=5e-26]} {Celegans: WBGene00018020, F33H12.6, [RH, Score=741, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=110, Expect=1e-24]} {RNA1509_16163} {RNA1310_2680.1} {RNA815_356.1}

Mlig455_052914 {REF} {Length: 5871} {Pfam: Helitron helicase-like domain at N-terminus [PF14214.8, score=175.0]} {Celegans: WBGene00019136, F59H6.5, [Score=521, Expect=3e-162]} {Smed: dd_Smed_v6_91935_0_1, dd_Smed_v6_91935_0_1, [Score=69.7, Expect=8e-14]} {RNA1509_16163} {RNA1310_2680.1} {RNA815_356.1}

Mlig455_054666 {REF} {Length: 5148} {Pfam: PIF1-like helicase [PF05970.16, score=333.4]; Helitron helicase-like domain at N-terminus [PF14214.8, score=174.4]; AAA domain [PF13604.8, score=47.9]; UvrD-like helicase C-terminal domain [PF13538.8, score=19.1]; AAA domain [PF13245.8, score=18.9]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=114, Expect=6e-25]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=109, Expect=9e-24]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=114, Expect=2e-25]} {Celegans: WBGene00018020, F33H12.6, [Score=722, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=108, Expect=7e-24]} {RNA1509_16163} {RNA1310_2680.1} {RNA815_356.1}
93. MligTC455_07399 13 0.27 Mlig455_042484

Neo: -

Age: -

 0.988 - - - - 0.988 - Mlig455_042484 {REF} {Length: 3577} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=95.6]} {Smed: dd_Smed_v6_17245_0_1, dd_Smed_v6_17245_0_1, [Score=62.0, Expect=8e-10]} {RNA1310_65251} {RNA815_37174}
94. MligTC455_32283 8 0.16 Mlig455_036099

Neo: -

Age: -

 0.987 - - - - 0.987 - Mlig455_036099 {REF} {Length: 575} {Pfam: Transcription factor IIA, alpha/beta subunit [PF03153.15, score=20.3]} {RNA1310_12760} {RNA815_50138}
95. MligTC455_38866 44 0.93 Mlig455_053830

Neo: Irradiation

Age: -

Region-enriched R5: 2.710/0.02791

 0.985 - - - - 0.985 - Mlig455_053830 {REF} {Length: 2741} {Pfam: THAP domain [PF05485.14, score=36.6]; Glycine rich protein [PF12810.9, score=18.5]} {RNA1509_12139} {RNA1310_31697} {RNA815_50211}
96. MligTC455_31787 8 0.17 Mlig455_052630

Neo: -

Age: -

 TRIM3 0.982 - - - - 0.982 - Mlig455_052630 {REF} {Length: 2227} {Pfam: NHL repeat [PF01436.23, score=30.0]} {Human: ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=59.3, Expect=6e-09]} {Mouse: ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=59.3, Expect=4e-09]} {RNA1509_15622} {RNA1310_14145.1} {RNA815_3900.1}
97. MligTC455_51717 52 1.08 Mlig455_001880

Neo: -

Age: Down-Up-Up

 0.981 - - - - 0.981 - Mlig455_001880 {REF} {Length: 1251} {TRANSSPLICED} {RNA1310_62660} {RNA815_37836}
98. MligTC455_51969 6 0.13 Mlig455_017621

Neo: -

Age: -

 0.981 - - - - 0.981 - Mlig455_017621 {REF} {Length: 2763} {NoTransDecoderORF} {RNA1509_59554} {RNA1310_24018} {RNA815_9685.1}
99. MligTC455_38887 4 0.07 Mlig455_026711

Neo: -

Age: -

 0.98 - - - - 0.980 - Mlig455_026711 {REF} {Length: 3396} {TRANSSPLICED} {Pfam: AIG1 family [PF04548.18, score=33.3]; Type II/IV secretion system protein [PF00437.22, score=24.4]; 50S ribosome-binding GTPase [PF01926.25, score=24.0]; AAA domain [PF13476.8, score=23.2]; Septin [PF00735.20, score=22.4]; FtsK/SpoIIIE family [PF01580.20, score=22.2]; ABC transporter [PF00005.29, score=22.1]; P-loop containing region of AAA domain [PF13555.8, score=20.1]; AAA domain [PF13401.8, score=18.9]} {Celegans: WBGene00015956, C18B2.5, [Score=66.2, Expect=5e-11]} {RNA1509_21324} {RNA1310_2983} {RNA815_977}
100. MligTC455_45988 17 0.36 Mlig455_059035

Neo: -

Age: logFC(26M/2M)=1.562

 GIMAP7 0.98 - - - - 0.980 - Mlig455_059035 {REF} {Length: 1951} {Pfam: AIG1 family [PF04548.18, score=135.8]; 50S ribosome-binding GTPase [PF01926.25, score=37.6]; Dynamin family [PF00350.25, score=28.0]; ABC transporter [PF00005.29, score=24.9]; Septin [PF00735.20, score=21.2]; RsgA GTPase [PF03193.18, score=18.6]; Ferrous iron transport protein B [PF02421.20, score=18.3]} {Human: ENSG00000179144, GIMAP7, GTPase, IMAP family member 7, [Score=96.7, Expect=8e-23]} {Mouse: ENSMUSG00000051124, Gimap9, GTPase, IMAP family member 9, [Score=94.7, Expect=3e-22]; ENSMUSG00000043931, Gimap7, GTPase, IMAP family member 7, [Score=94.4, Expect=5e-22]} {RNA1509_14293} {RNA1310_40421} {RNA815_33763}

There are 47 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA