Data search


search
Exact
Search

Results for MligTC455_28506

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_28506 73 1.52 Mlig455_024551

Neo: -

Age: -

MMEL1 Mlig455_024551 {REF} {Length: 4350} {Pfam: Peptidase family M13 [PF05649.15, score=171.8]; Peptidase family M13 [PF01431.23, score=89.0]} {Human: ENSG00000277131, MMEL1, membrane metalloendopeptidase like 1, [Score=194, Expect=3e-51]; ENSG00000142606, MMEL1, membrane metalloendopeptidase like 1, [Score=194, Expect=3e-51]; ENSG00000284917, EEF1AKMT4-ECE2, EEF1AKMT4-ECE2 readthrough, [Score=191, Expect=5e-50]; ENSG00000145194, ECE2, endothelin converting enzyme 2, [Score=191, Expect=1e-50]} {Mouse: ENSMUSG00000022842, Ece2, endothelin converting enzyme 2, [Score=193, Expect=2e-51]; ENSMUSG00000115293, Gm49333, predicted gene, 49333, [Score=192, Expect=8e-51]; ENSMUSG00000058183, Mmel1, membrane metallo-endopeptidase-like 1, [Score=189, Expect=3e-50]} {Dmel: FBgn0031081, Nep3, Neprilysin 3, [Score=193, Expect=2e-51]} {Celegans: WBGene00020230, nep-2, Neprilysin-2, [Score=168, Expect=2e-43]} {Smed: dd_Smed_v6_1910_0_1, dd_Smed_v6_1910_0_1, [Score=160, Expect=8e-41]} {RNA1509_8085} {RNA1310_3632, RNA1509_8085} {RNA1509_8085, RNA815_1118}

Cumulative graph for MligTC455_28506

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.645 1.817 1.00000 1.00000
RegionR2 1.05 1.817 0.44067 0.82990
RegionR3 1.276 1.817 0.27430 0.81866
RegionR4 2.434 1.817 0.07119 0.24465
RegionR5 -0.532 1.817 0.87820 1.00000
RegionR6 0.822 1.817 0.47839 1.00000
RegionR7 1.141 1.817 0.44502 1.00000
RegionR8 -4.547 1.817 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.6 1.817 0.99992 1.00000
RegenerationR2 -2.498 1.817 0.02055 0.23530
RegenerationR3 -0.501 1.817 0.56868 0.89343
RegenerationR4 -0.586 1.817 0.51541 0.87757
RegenerationR5 0.637 1.817 0.47360 0.84353
RegenerationR6 -2.213 1.817 0.05728 0.30005
RegenerationBL -2.357 1.817 1.00000 1.00000
RegenerationTP 3.316 1.817 0.09267 0.47796


Genes with expression patterns similar to MligTC455_28506

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_28506 73 1.52 Mlig455_024551

Neo: -

Age: -

MMEL1 5 1.000 1.000 1.000 - 1.000 1.000 Mlig455_024551 {REF} {Length: 4350} {Pfam: Peptidase family M13 [PF05649.15, score=171.8]; Peptidase family M13 [PF01431.23, score=89.0]} {Human: ENSG00000277131, MMEL1, membrane metalloendopeptidase like 1, [Score=194, Expect=3e-51]; ENSG00000142606, MMEL1, membrane metalloendopeptidase like 1, [Score=194, Expect=3e-51]; ENSG00000284917, EEF1AKMT4-ECE2, EEF1AKMT4-ECE2 readthrough, [Score=191, Expect=5e-50]; ENSG00000145194, ECE2, endothelin converting enzyme 2, [Score=191, Expect=1e-50]} {Mouse: ENSMUSG00000022842, Ece2, endothelin converting enzyme 2, [Score=193, Expect=2e-51]; ENSMUSG00000115293, Gm49333, predicted gene, 49333, [Score=192, Expect=8e-51]; ENSMUSG00000058183, Mmel1, membrane metallo-endopeptidase-like 1, [Score=189, Expect=3e-50]} {Dmel: FBgn0031081, Nep3, Neprilysin 3, [Score=193, Expect=2e-51]} {Celegans: WBGene00020230, nep-2, Neprilysin-2, [Score=168, Expect=2e-43]} {Smed: dd_Smed_v6_1910_0_1, dd_Smed_v6_1910_0_1, [Score=160, Expect=8e-41]} {RNA1509_8085} {RNA1310_3632, RNA1509_8085} {RNA1509_8085, RNA815_1118}
2. MligTC455_15697 43 0.9 Mlig455_037156, Mlig455_038496, Mlig455_052305

Neo: Irradiation

Age: Up-Down-Down

0.985 - - - - 0.985 -

Mlig455_037156 {REF} {Length: 2049} {TRANSSPLICED} {Pfam: C9orf72-like protein family [PF15019.8, score=67.6]} {Smed: dd_Smed_v6_6804_0_2, dd_Smed_v6_6804_0_2, [RH, Score=68.9, Expect=2e-12]} {RNA1509_19322} {RNA1310_13143, RNA1509_19322} {RNA1509_19322, RNA815_13858}

Mlig455_038496 {REF} {Length: 2045} {TRANSSPLICED} {Pfam: C9orf72-like protein family [PF15019.8, score=68.1]} {Smed: dd_Smed_v6_6804_0_2, dd_Smed_v6_6804_0_2, [RH, Score=68.9, Expect=2e-12]} {RNA1509_19322} {RNA1310_13143} {RNA815_13858}

Mlig455_052305 {REF} {Length: 2015} {TRANSSPLICED} {Pfam: C9orf72-like protein family [PF15019.8, score=67.6]} {Smed: dd_Smed_v6_6804_0_2, dd_Smed_v6_6804_0_2, [RH, Score=68.9, Expect=2e-12]} {RNA1509_19322} {RNA1310_13143} {RNA815_13858}
3. MligTC455_54106 87 1.81 Mlig455_046338, Mlig455_068234

Neo: Int S/G2/M

Age: Up-Down-Down

PLCB1, PLCB3 0.98 - - - - - 0.980

Mlig455_046338 {REF} {Length: 4577} {Pfam: Phosphatidylinositol-specific phospholipase C, X domain [PF00388.21, score=201.8]; Phosphatidylinositol-specific phospholipase C, Y domain [PF00387.21, score=127.9]; PH domain [PF17787.3, score=69.3]; Protein of unknown function (DUF1154) [PF06631.13, score=28.5]; Phosphoinositide-specific phospholipase C, efhand-like [PF09279.13, score=27.5]} {Human: ENSG00000182621, PLCB1, phospholipase C beta 1, [Score=797, Expect=0.0]; ENSG00000149782, PLCB3, phospholipase C beta 3, [Score=796, Expect=0.0]} {Mouse: ENSMUSG00000051177, Plcb1, phospholipase C, beta 1, [Score=801, Expect=0.0]; ENSMUSG00000024960, Plcb3, phospholipase C, beta 3, [Score=784, Expect=0.0]} {Dmel: FBgn0004611, Plc21C, Phospholipase C at 21C, [Score=418, Expect=4e-125]} {Celegans: WBGene00001177, egl-8, 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta egl-8, [Score=671, Expect=0.0]} {Smed: dd_Smed_v6_3221_0_1, dd_Smed_v6_3221_0_1, [Score=702, Expect=0.0]} {RNA1509_50989} {RNA1310_17477} {RNA815_25811}

Mlig455_068234 {REF} {Length: 4646} {Pfam: Phosphatidylinositol-specific phospholipase C, X domain [PF00388.21, score=201.7]; Phosphatidylinositol-specific phospholipase C, Y domain [PF00387.21, score=127.9]; PH domain [PF17787.3, score=123.2]; Protein of unknown function (DUF1154) [PF06631.13, score=28.5]; Phosphoinositide-specific phospholipase C, efhand-like [PF09279.13, score=27.4]} {Human: ENSG00000149782, PLCB3, phospholipase C beta 3, [RH, Score=837, Expect=0.0]; ENSG00000182621, PLCB1, phospholipase C beta 1, [RH, Score=831, Expect=0.0]} {Mouse: ENSMUSG00000051177, Plcb1, phospholipase C, beta 1, [RH, Score=830, Expect=0.0]; ENSMUSG00000024960, Plcb3, phospholipase C, beta 3, [RH, Score=827, Expect=0.0]} {Dmel: FBgn0004611, Plc21C, Phospholipase C at 21C, [Score=444, Expect=7e-134]} {Celegans: WBGene00001177, egl-8, 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta egl-8, [Score=684, Expect=0.0]} {Smed: dd_Smed_v6_3221_0_2, dd_Smed_v6_3221_0_2, [Score=716, Expect=0.0]} {RNA1509_50989} {RNA1310_17477, RNA1509_50989} {RNA1509_50989, RNA815_25811}
4. MligTC455_30345 55 1.15 Mlig455_052503, Mlig455_058640

Neo: -

Age: -

Region-enriched R2: 7.557/0.02160

0.974 - - - - 0.974 -

Mlig455_052503 {REF} {Length: 1415} {TRANSSPLICED} {RNA1509_27914} {RNA1310_4467.1} {RNA815_14537.1}

Mlig455_058640 {REF} {Length: 1738} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_27914} {RNA1310_4467.1} {RNA815_14537.2}
5. MligTC455_34328 66 1.37 Mlig455_053734

Neo: -

Age: logFC(26M/2M)=1.758

CUBN 0.973 - - - - - 0.973 Mlig455_053734 {REF} {Length: 5656} {Pfam: CUB domain [PF00431.22, score=135.6]; CUB-like domain [PF02408.22, score=21.1]} {Human: ENSG00000107611, CUBN, cubilin, [Score=77.4, Expect=2e-13]} {Mouse: ENSMUSG00000026726, Cubn, cubilin (intrinsic factor-cobalamin receptor), [Score=88.6, Expect=6e-17]} {Dmel: FBgn0052702, Cubn, Cubilin, [Score=76.6, Expect=2e-13]} {Celegans: WBGene00013855, ZC116.3, Probable cubilin, [Score=52.8, Expect=3e-06]} {RNA1509_39882} {RNA1310_3219.1} {RNA815_2919}
6. MligTC455_12782 51 1.07 Mlig455_012991

Neo: -

Age: -

0.964 - - - - - 0.964 Mlig455_012991 {REF} {Length: 1473} {TRANSSPLICED} {RNA1509_56473} {RNA1310_22716.1, RNA1509_56473} {RNA1509_56473, RNA815_10095.1}
7. MligTC455_22923 53 1.1 Mlig455_068434

Neo: -

Age: Down-Up-Down

MYLK3 0.964 - - - - - 0.964 Mlig455_068434 {REF} {Length: 2249} {Pfam: Protein kinase domain [PF00069.27, score=28.7]} {Human: ENSG00000140795, MYLK3, myosin light chain kinase 3, [Score=49.7, Expect=1e-07]} {Mouse: ENSMUSG00000031698, Mylk3, myosin light chain kinase 3, [Score=49.7, Expect=9e-08]} {Dmel: FBgn0265045, Strn-Mlck, Stretchin-Mlck, [Score=48.5, Expect=1e-07]} {Smed: dd_Smed_v6_8041_0_1, dd_Smed_v6_8041_0_1, [Score=49.3, Expect=4e-08]} {RNA1509_36787} {RNA1310_62109} {RNA815_9443}
8. MligTC455_17016 155 3.23 Mlig455_035181

Neo: -

Age: -

ENTPD5 0.951 - - - - - 0.951 Mlig455_035181 {REF} {Length: 1826} {Pfam: GDA1/CD39 (nucleoside phosphatase) family [PF01150.19, score=225.1]; Ppx/GppA phosphatase family [PF02541.18, score=26.6]} {Human: ENSG00000187097, ENTPD5, ectonucleoside triphosphate diphosphohydrolase 5, [Score=201, Expect=4e-59]; ENSG00000197586, ENTPD6, ectonucleoside triphosphate diphosphohydrolase 6 (putative), [Score=201, Expect=1e-58]} {Mouse: ENSMUSG00000021236, Entpd5, ectonucleoside triphosphate diphosphohydrolase 5, [Score=196, Expect=2e-57]; ENSMUSG00000033068, Entpd6, ectonucleoside triphosphate diphosphohydrolase 6, [Score=192, Expect=1e-55]} {Dmel: FBgn0024947, NTPase, [Score=171, Expect=5e-48]} {Celegans: WBGene00010697, uda-1, Nucleoside-diphosphatase uda-1, [Score=150, Expect=4e-40]} {Smed: dd_Smed_v6_8855_0_2, dd_Smed_v6_8855_0_2, [Score=174, Expect=3e-49]} {RNA1310_18865} {RNA815_7516}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA