Data search


search
Exact
Search

Results for MligTC455_28533

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_28533 1390 28.97 Mlig455_002246

Neo: -

Age: -

PPP1R9A Mlig455_002246 {REF} {Length: 4887} {TRANSSPLICED} {Pfam: PDZ domain [PF17817.3, score=77.0]; PDZ domain [PF00595.26, score=50.2]; PDZ domain [PF17820.3, score=18.5]} {Human: ENSG00000158528, PPP1R9A, protein phosphatase 1 regulatory subunit 9A, [RH, Score=209, Expect=6e-55]} {Mouse: ENSMUSG00000032827, Ppp1r9a, protein phosphatase 1, regulatory subunit 9A, [RH, Score=211, Expect=2e-55]} {Dmel: FBgn0010905, Spn, Spinophilin, [RH, Score=223, Expect=3e-59]} {Celegans: WBGene00003516, nab-1, NeurABin, [RH, Score=196, Expect=2e-52]} {Smed: dd_Smed_v6_4446_0_1, dd_Smed_v6_4446_0_1, [RH, Score=202, Expect=4e-53]} {RNA1509_4283} {RNA1310_1050.1} {RNA815_3840}

Cumulative graph for MligTC455_28533

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.478 5.1 0.14568 0.75855
RegionR2 -0.21 5.1 0.66228 0.99350
RegionR3 -0.187 5.1 0.64992 1.00000
RegionR4 0.619 5.1 0.18248 0.45376
RegionR5 0.612 5.1 0.10054 0.30640
RegionR6 0.414 5.1 0.29479 0.88630
RegionR7 -0.229 5.1 0.64007 1.00000
RegionR8 0.458 5.1 0.38131 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.257 5.1 0.86788 1.00000
RegenerationR2 0.106 5.1 0.81703 0.99442
RegenerationR3 0.261 5.1 0.58490 0.90089
RegenerationR4 -0.012 5.1 0.97956 1.00000
RegenerationR5 0.418 5.1 0.36256 0.77369
RegenerationR6 -0.049 5.1 0.91634 1.00000
RegenerationBL -0.142 5.1 0.76172 1.00000
RegenerationTP -0.027 5.1 0.95804 1.00000


Genes with expression patterns similar to MligTC455_28533

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_28533 1390 28.97 Mlig455_002246

Neo: -

Age: -

PPP1R9A 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_002246 {REF} {Length: 4887} {TRANSSPLICED} {Pfam: PDZ domain [PF17817.3, score=77.0]; PDZ domain [PF00595.26, score=50.2]; PDZ domain [PF17820.3, score=18.5]} {Human: ENSG00000158528, PPP1R9A, protein phosphatase 1 regulatory subunit 9A, [RH, Score=209, Expect=6e-55]} {Mouse: ENSMUSG00000032827, Ppp1r9a, protein phosphatase 1, regulatory subunit 9A, [RH, Score=211, Expect=2e-55]} {Dmel: FBgn0010905, Spn, Spinophilin, [RH, Score=223, Expect=3e-59]} {Celegans: WBGene00003516, nab-1, NeurABin, [RH, Score=196, Expect=2e-52]} {Smed: dd_Smed_v6_4446_0_1, dd_Smed_v6_4446_0_1, [RH, Score=202, Expect=4e-53]} {RNA1509_4283} {RNA1310_1050.1} {RNA815_3840}
2. MligTC455_28532 1281 26.7 Mlig455_002143

Neo: -

Age: -

PPP1R9A 5.796 0.937 0.947 0.990 0.982 0.988 0.952 Mlig455_002143 {REF} {Length: 5125} {TRANSSPLICED} {Pfam: PDZ domain [PF17817.3, score=76.8]; PDZ domain [PF00595.26, score=50.0]} {Human: ENSG00000158528, PPP1R9A, protein phosphatase 1 regulatory subunit 9A, [RH, Score=211, Expect=3e-55]} {Mouse: ENSMUSG00000032827, Ppp1r9a, protein phosphatase 1, regulatory subunit 9A, [RH, Score=211, Expect=2e-55]} {Dmel: FBgn0010905, Spn, Spinophilin, [RH, Score=218, Expect=2e-57]} {Celegans: WBGene00003516, nab-1, NeurABin, [RH, Score=197, Expect=1e-52]} {Smed: dd_Smed_v6_4446_0_1, dd_Smed_v6_4446_0_1, [RH, Score=202, Expect=8e-53]} {RNA1509_20429} {RNA1310_1050.1} {RNA815_845}
3. MligTC455_28534 1286 26.79 Mlig455_002288

Neo: -

Age: -

PPP1R9A 5.786 0.956 0.924 0.996 0.990 0.970 0.950 Mlig455_002288 {REF} {Length: 5407} {TRANSSPLICED} {Pfam: PDZ domain [PF17817.3, score=76.7]; PDZ domain [PF00595.26, score=49.9]} {Human: ENSG00000158528, PPP1R9A, protein phosphatase 1 regulatory subunit 9A, [RH, Score=211, Expect=4e-55]} {Mouse: ENSMUSG00000032827, Ppp1r9a, protein phosphatase 1, regulatory subunit 9A, [RH, Score=211, Expect=2e-55]} {Dmel: FBgn0010905, Spn, Spinophilin, [RH, Score=223, Expect=6e-59]} {Celegans: WBGene00003516, nab-1, NeurABin, [RH, Score=197, Expect=2e-52]} {Smed: dd_Smed_v6_4446_0_1, dd_Smed_v6_4446_0_1, [RH, Score=202, Expect=9e-53]} {RNA1509_4283, RNA1509_6980} {RNA1310_1595, RNA1509_6980} {RNA1509_6980, RNA815_3840}
4. MligTC455_46673 2511 52.31 Mlig455_001920

Neo: -

Age: -

WAS 1.783 - - 0.833 - - 0.950 Mlig455_001920 {REF} {Length: 3207} {Pfam: WH1 domain [PF00568.25, score=84.7]; P21-Rho-binding domain [PF00786.30, score=27.1]; WH2 motif [PF02205.22, score=19.9]} {Human: ENSG00000015285, WAS, Wiskott-Aldrich syndrome, [RH, Score=138, Expect=7e-35]} {Mouse: ENSMUSG00000029684, Wasl, Wiskott-Aldrich syndrome-like (human), [RH, Score=98.6, Expect=2e-23]} {Dmel: FBgn0024273, WASp, [Score=93.2, Expect=8e-20]} {Smed: dd_Smed_v6_1987_0_1, dd_Smed_v6_1987_0_1, [RH, Score=79.7, Expect=8e-16]} {RNA1509_15317, RNA1509_16868, RNA1509_3515} {RNA1310_20700, RNA1509_15317, RNA1509_16868, RNA1509_3515} {RNA1509_15317, RNA1509_16868, RNA1509_3515, RNA815_12150.1}
5. MligTC455_42163 1246 25.95 Mlig455_048416

Neo: Int S/G2/M

Age: Down-Down-Up

DR1 1.729 - - - 0.951 0.778 - Mlig455_048416 {REF} {Length: 1824} {TRANSSPLICED} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=70.7]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=32.0]; CENP-W protein [PF15510.8, score=24.7]} {Human: ENSG00000117505, DR1, down-regulator of transcription 1, [RH, Score=132, Expect=7e-39]} {Mouse: ENSMUSG00000029265, Dr1, down-regulator of transcription 1, [RH, Score=132, Expect=5e-39]} {Dmel: FBgn0028926, NC2beta, Negative Cofactor 2beta, [RH, Score=127, Expect=6e-37]} {Celegans: WBGene00001092, dro-1, DR1 (One) transcription factor family, [RH, Score=90.1, Expect=1e-22]} {Smed: dd_Smed_v6_7479_0_1, dd_Smed_v6_7479_0_1, [RH, Score=125, Expect=2e-36]} {RNA1509_14024, RNA1509_24840, RNA1509_26197, RNA1509_7108} {RNA1310_37108, RNA1509_14024, RNA1509_24840, RNA1509_26197} {RNA1509_14024, RNA1509_24840, RNA1509_26197, RNA815_17293}
6. MligTC455_36921 1688 35.18 Mlig455_025773, Mlig455_064418

Neo: -

Age: -

Region-enriched R5: 1.081/0.00614

PTDSS1 0.982 - - - 0.982 - -

Mlig455_025773 {REF} {Length: 3227} {Pfam: Phosphatidyl serine synthase [PF03034.17, score=334.9]} {Human: ENSG00000156471, PTDSS1, phosphatidylserine synthase 1, [RH, Score=415, Expect=2e-141]} {Mouse: ENSMUSG00000021518, Ptdss1, phosphatidylserine synthase 1, [RH, Score=419, Expect=6e-143]} {Dmel: FBgn0037010, CG4825, [RH, Score=430, Expect=3e-147]} {Celegans: WBGene00013920, pssy-1, PhosphatidylSerine SYnthase, [RH, Score=399, Expect=5e-135]} {Smed: dd_Smed_v6_2855_0_1, dd_Smed_v6_2855_0_1, [RH, Score=522, Expect=0.0]} {RNA1509_5770} {RNA1310_323} {RNA815_5210.1}

Mlig455_064418 {REF} {Length: 2678} {TRANSSPLICED} {Pfam: Phosphatidyl serine synthase [PF03034.17, score=334.9]} {Human: ENSG00000156471, PTDSS1, phosphatidylserine synthase 1, [RH, Score=415, Expect=2e-141]} {Mouse: ENSMUSG00000021518, Ptdss1, phosphatidylserine synthase 1, [RH, Score=419, Expect=6e-143]} {Dmel: FBgn0037010, CG4825, [RH, Score=430, Expect=3e-147]} {Celegans: WBGene00013920, pssy-1, PhosphatidylSerine SYnthase, [RH, Score=399, Expect=5e-135]} {Smed: dd_Smed_v6_2855_0_1, dd_Smed_v6_2855_0_1, [RH, Score=522, Expect=0.0]} {RNA1509_5770} {RNA1310_323} {RNA815_5210.1}
7. MligTC455_44192 1330 27.7 Mlig455_069040

Neo: -

Age: -

0.979 - - - 0.979 - - Mlig455_069040 {REF} {Length: 4668} {RNA1509_20113, RNA1509_23522, RNA1509_28261, RNA1509_59892} {RNA1310_17993, RNA1509_20113, RNA1509_23522, RNA1509_28261, RNA1509_59892} {RNA1509_20113, RNA1509_23522, RNA1509_28261, RNA1509_59892, RNA815_30434.1}
8. MligTC455_31514 4359 90.81 Mlig455_031839

Neo: -

Age: logFC(26M/2M)=-0.154

ACO2 0.972 - - - 0.972 - - Mlig455_031839 {REF} {Length: 3664} {TRANSSPLICED} {Pfam: Aconitase family (aconitate hydratase) [PF00330.22, score=511.8]; Aconitase C-terminal domain [PF00694.21, score=145.7]} {Human: ENSG00000100412, ACO2, aconitase 2, [RH, Score=1147, Expect=0.0]} {Mouse: ENSMUSG00000022477, Aco2, aconitase 2, mitochondrial, [RH, Score=1151, Expect=0.0]} {Dmel: FBgn0010100, Acon, Aconitase, [RH, Score=1150, Expect=0.0]} {Celegans: WBGene00000041, aco-2, Probable aconitate hydratase, mitochondrial, [RH, Score=1148, Expect=0.0]} {Smed: dd_Smed_v6_979_0_1, dd_Smed_v6_979_0_1, [RH, Score=1154, Expect=0.0]} {RNA1509_2297, RNA1509_349} {RNA1310_3217.1, RNA1509_2297, RNA1509_349} {RNA1509_2297, RNA1509_349, RNA815_1749}
9. MligTC455_18566 341 7.1 Mlig455_041874

Neo: -

Age: Up-Up-Down, logFC(26M/2M)=0.282

0.969 - - - 0.969 - - Mlig455_041874 {REF} {Length: 3459} {TRANSSPLICED} {Pfam: Glycosyl transferase family 2 [PF00535.28, score=41.5]; Glycosyltransferase like family 2 [PF13641.8, score=19.5]} {Smed: dd_Smed_v6_6076_0_1, dd_Smed_v6_6076_0_1, [Score=148, Expect=8e-41]} {RNA1509_10264} {RNA1310_5492.1} {RNA815_2741}
10. MligTC455_43296 4325 90.11 Mlig455_029626

Neo: -

Age: -

ATP6V0A1 0.968 - - - 0.968 - - Mlig455_029626 {REF} {Length: 4478} {TRANSSPLICED} {Pfam: V-type ATPase 116kDa subunit family [PF01496.21, score=1085.1]} {Human: ENSG00000033627, ATP6V0A1, ATPase H+ transporting V0 subunit a1, [Score=818, Expect=0.0]} {Mouse: ENSMUSG00000019302, Atp6v0a1, ATPase, H+ transporting, lysosomal V0 subunit A1, [Score=829, Expect=0.0]} {Dmel: FBgn0028671, Vha100-1, Vacuolar H[+] ATPase 100kD subunit 1, [Score=774, Expect=0.0]} {Celegans: WBGene00006768, unc-32, Probable V-type proton ATPase 116 kDa subunit a, [RH, Score=940, Expect=0.0]} {Smed: dd_Smed_v6_833_0_1, dd_Smed_v6_833_0_1, [Score=796, Expect=0.0]} {RNA1509_1056} {RNA1310_4915.1} {RNA815_1119}
11. MligTC455_17086 636 13.26 Mlig455_010704

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.247

Region-enriched R5: 1.126/0.00025

NOMO2 0.966 - - - 0.966 - - Mlig455_010704 {REF} {Length: 5598} {Pfam: Carboxypeptidase regulatory-like domain [PF13620.8, score=132.7]; Prealbumin-like fold domain [PF17802.3, score=53.8]; SdrD B-like domain [PF17210.5, score=52.5]; Protein of unknown function (DUF2012) [PF09430.12, score=50.6]; CarboxypepD_reg-like domain [PF13715.8, score=34.6]; Domain of unknown function (DUF4198) [PF10670.11, score=25.1]; Protein of unknown function (DUF1416) [PF07210.14, score=23.1]; Polysaccharide lyase family 4, domain II [PF14686.8, score=18.7]} {Human: ENSG00000185164, NOMO2, NODAL modulator 2, [RH, Score=202, Expect=1e-52]; ENSG00000103226, NOMO3, NODAL modulator 3, [RH, Score=201, Expect=3e-52]; ENSG00000274779, NOMO1, NODAL modulator 1, [RH, Score=201, Expect=4e-52]; ENSG00000103512, NOMO1, NODAL modulator 1, [RH, Score=201, Expect=4e-52]; ENSG00000278087, NOMO3, NODAL modulator 3, [RH, Score=201, Expect=3e-52]} {Mouse: ENSMUSG00000030835, Nomo1, nodal modulator 1, [RH, Score=193, Expect=1e-49]} {Dmel: FBgn0033482, CG1371, [RH, Score=270, Expect=4e-75]} {Celegans: WBGene00015344, nra-4, Nicotinic Receptor Associated, [RH, Score=225, Expect=2e-60]} {Smed: dd_Smed_v6_3315_0_1, dd_Smed_v6_3315_0_1, [RH, Score=275, Expect=8e-77]} {RNA1509_3897} {RNA1310_2809.1} {RNA815_14760}
12. MligTC455_18199 888 18.5 Mlig455_005841

Neo: Int S/G2/M

Age: -

Region-enriched R4: 2.228/0.00370
Region-enriched R5: 2.145/0.00046

COA6 0.964 - - - 0.964 - - Mlig455_005841 {REF} {Length: 1239} {TRANSSPLICED} {Pfam: Cytochrome oxidase c subunit VIb [PF02297.19, score=53.7]} {Human: ENSG00000168275, COA6, cytochrome c oxidase assembly factor 6, [RH, Score=66.6, Expect=6e-15]} {Mouse: ENSMUSG00000051671, Coa6, cytochrome c oxidase assembly factor 6, [RH, Score=63.9, Expect=1e-14]} {Dmel: FBgn0259722, CG42376, [RH, Score=67.8, Expect=4e-16]} {Celegans: WBGene00013893, ZC434.7, [RH, Score=58.9, Expect=9e-13]} {RNA1509_28237} {RNA1310_44403} {RNA815_25866.1}
13. MligTC455_24048 3092 64.42 Mlig455_008833, Mlig455_008935

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.252

HYPK 0.96 - - - 0.960 - -

Mlig455_008833 {REF} {Length: 1083} {TRANSSPLICED} {Pfam: HYPK UBA domain [PF19026.2, score=51.9]} {Human: ENSG00000242028, HYPK, huntingtin interacting protein K, [RH, Score=64.3, Expect=2e-13]} {Mouse: ENSMUSG00000027245, Hypk, huntingtin interacting protein K, [RH, Score=64.3, Expect=1e-13]} {Dmel: FBgn0038196, CG9922, [RH, Score=52.4, Expect=3e-09]} {RNA1509_10390, RNA1509_54479} {RNA1310_31866, RNA1509_10390, RNA1509_54479} {RNA1509_10390, RNA1509_54479, RNA815_38606}

Mlig455_008935 {REF} {Length: 1083} {TRANSSPLICED} {Pfam: HYPK UBA domain [PF19026.2, score=51.9]} {Human: ENSG00000242028, HYPK, huntingtin interacting protein K, [RH, Score=64.3, Expect=2e-13]} {Mouse: ENSMUSG00000027245, Hypk, huntingtin interacting protein K, [RH, Score=64.3, Expect=1e-13]} {Dmel: FBgn0038196, CG9922, [RH, Score=52.4, Expect=3e-09]} {RNA1509_10375, RNA1509_10390} {RNA1310_31866, RNA1509_10375} {RNA1509_10375, RNA815_38606}
14. MligTC455_46544 4871 101.48 Mlig455_017372

Neo: -

Age: -

Region-enriched R4: 1.234/0.00612

NDUFB2 0.96 - - - 0.960 - - Mlig455_017372 {REF} {Length: 622} {TRANSSPLICED} {Pfam: NADH dehydrogenase 1 beta subcomplex subunit 2 [PF14813.8, score=73.6]} {Human: ENSG00000090266, NDUFB2, NADH:ubiquinone oxidoreductase subunit B2, [RH, Score=67.8, Expect=2e-15]} {Mouse: ENSMUSG00000002416, Ndufb2, NADH:ubiquinone oxidoreductase subunit B2, [RH, Score=66.2, Expect=5e-15]} {Dmel: FBgn0058002, ND-AGGG, NADH dehydrogenase (ubiquinone) AGGG subunit, [RH, Score=55.1, Expect=5e-11]} {RNA1509_13388, RNA1509_34288, RNA1509_43401} {RNA1310_52799, RNA1509_13388, RNA1509_34288, RNA1509_43401} {RNA1509_13388, RNA1509_34288, RNA1509_43401, RNA815_26877}
15. MligTC455_20833 176 3.67 Mlig455_070354

Neo: -

Age: Up-Up-Down

CUBN 0.959 - - - - 0.959 - Mlig455_070354 {REF} {Length: 3209} {Pfam: CUB domain [PF00431.22, score=88.6]; TMEM154 protein family [PF15102.8, score=20.3]} {Human: ENSG00000107611, CUBN, cubilin, [Score=66.2, Expect=2e-10]} {Mouse: ENSMUSG00000047517, Dmbt1, deleted in malignant brain tumors 1, [Score=62.8, Expect=1e-09]} {Dmel: FBgn0031879, uif, uninflatable, [Score=62.8, Expect=1e-09]} {RNA1509_23090} {RNA1310_1548.1} {RNA815_1199.1}
16. MligTC455_20710 600 12.51 Mlig455_032523

Neo: -

Age: Up-Down-Down

EPG5 0.958 - - - 0.958 - - Mlig455_032523 {REF} {Length: 10511} {TRANSSPLICED} {Human: ENSG00000152223, EPG5, ectopic P-granules autophagy protein 5 homolog, [Score=278, Expect=1e-76]} {Mouse: ENSMUSG00000039840, Epg5, ectopic P-granules autophagy protein 5 homolog (C. elegans), [Score=271, Expect=2e-74]; ENSMUSG00000116023, Epg5, ectopic P-granules autophagy protein 5 homolog (C. elegans), [Score=271, Expect=2e-74]} {Smed: dd_Smed_v6_3273_0_1, dd_Smed_v6_3273_0_1, [Score=193, Expect=5e-50]} {RNA1509_3973} {RNA1310_276.1} {RNA815_491}
17. MligTC455_19461 410 8.54 Mlig455_020955

Neo: -

Age: logFC(26M/2M)=-0.648

0.957 - - - 0.957 - - Mlig455_020955 {REF} {Length: 2035} {RNA1509_3144} {RNA1310_8535.1} {RNA815_3484.1}
18. MligTC455_11973 2442 50.87 Mlig455_051139, Mlig455_051213

Neo: -

Age: logFC(26M/2M)=-0.313

AP3M1 0.956 - - - 0.956 - -

Mlig455_051139 {REF} {Length: 2476} {Pfam: Adaptor complexes medium subunit family [PF00928.23, score=215.1]; Clathrin adaptor complex small chain [PF01217.22, score=39.3]} {Human: ENSG00000185009, AP3M1, adaptor related protein complex 3 subunit mu 1, [RH, Score=543, Expect=0.0]; ENSG00000070718, AP3M2, adaptor related protein complex 3 subunit mu 2, [RH, Score=516, Expect=0.0]} {Mouse: ENSMUSG00000021824, Ap3m1, adaptor-related protein complex 3, mu 1 subunit, [RH, Score=540, Expect=0.0]; ENSMUSG00000031539, Ap3m2, adaptor-related protein complex 3, mu 2 subunit, [RH, Score=515, Expect=0.0]} {Dmel: FBgn0000330, cm, carmine, [RH, Score=509, Expect=3e-180]} {Celegans: WBGene00000164, apm-3, AdaPtin, Mu/medium chain (Clathrin associated complex), [RH, Score=460, Expect=3e-161]} {Smed: dd_Smed_v6_6368_0_1, dd_Smed_v6_6368_0_1, [RH, Score=474, Expect=1e-166]} {RNA1509_4174, RNA1509_9522} {RNA1310_7893, RNA1509_4174, RNA1509_9522} {RNA1509_4174, RNA1509_9522, RNA815_2536.1}

Mlig455_051213 {REF} {Length: 1957} {Pfam: Adaptor complexes medium subunit family [PF00928.23, score=214.4]; Clathrin adaptor complex small chain [PF01217.22, score=39.3]} {Human: ENSG00000185009, AP3M1, adaptor related protein complex 3 subunit mu 1, [RH, Score=538, Expect=0.0]; ENSG00000070718, AP3M2, adaptor related protein complex 3 subunit mu 2, [RH, Score=512, Expect=0.0]} {Mouse: ENSMUSG00000021824, Ap3m1, adaptor-related protein complex 3, mu 1 subunit, [RH, Score=536, Expect=0.0]; ENSMUSG00000031539, Ap3m2, adaptor-related protein complex 3, mu 2 subunit, [RH, Score=510, Expect=0.0]} {Dmel: FBgn0000330, cm, carmine, [RH, Score=504, Expect=3e-178]} {Celegans: WBGene00000164, apm-3, AdaPtin, Mu/medium chain (Clathrin associated complex), [RH, Score=459, Expect=9e-161]} {Smed: dd_Smed_v6_6368_0_1, dd_Smed_v6_6368_0_1, [RH, Score=468, Expect=3e-164]} {RNA1509_59137, RNA1509_9522} {RNA1310_7893, RNA1509_59137} {RNA1509_59137, RNA815_2536.1}
19. MligTC455_52871 234 4.88 Mlig455_052238

Neo: Int S/G2/M

Age: Down-Up-Down

0.956 - - - 0.956 - - Mlig455_052238 {REF} {Length: 435} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_18726} {RNA1310_78288.1} {RNA815_42723}
20. MligTC455_47517 474 9.87 Mlig455_039840

Neo: -

Age: logFC(26M/2M)=0.285

Region-enriched R5: 1.029/0.01295

SLC8B1 0.955 - - - 0.955 - - Mlig455_039840 {REF} {Length: 3371} {TRANSSPLICED} {Pfam: Sodium/calcium exchanger protein [PF01699.26, score=175.4]} {Human: ENSG00000089060, SLC8B1, solute carrier family 8 member B1, [RH, Score=195, Expect=7e-54]} {Mouse: ENSMUSG00000032754, Slc8b1, solute carrier family 8 (sodium/lithium/calcium exchanger), member B1, [RH, Score=199, Expect=1e-55]} {Dmel: FBgn0033324, CG14744, [RH, Score=144, Expect=5e-36]} {Celegans: WBGene00003574, ncx-9, Na/Ca eXchangers, [RH, Score=219, Expect=3e-62]} {Smed: dd_Smed_v6_1009_1_1, dd_Smed_v6_1009_1_1, [Score=202, Expect=6e-59]} {RNA1509_16806} {RNA1310_10061, RNA1509_16806} {RNA1509_16806, RNA815_15337}
21. MligTC455_10562 356 7.42 Mlig455_023642

Neo: -

Age: -

RRAGC 0.954 - - - 0.954 - - Mlig455_023642 {REF} {Length: 3636} {Pfam: Gtr1/RagA G protein conserved region [PF04670.14, score=210.6]; ADP-ribosylation factor family [PF00025.23, score=31.8]; Signal recognition particle receptor beta subunit [PF09439.12, score=24.0]; Elongation factor Tu GTP binding domain [PF00009.29, score=19.5]; 50S ribosome-binding GTPase [PF01926.25, score=19.2]} {Human: ENSG00000116954, RRAGC, Ras related GTP binding C, [RH, Score=409, Expect=2e-140]; ENSG00000025039, RRAGD, Ras related GTP binding D, [RH, Score=399, Expect=1e-136]} {Mouse: ENSMUSG00000028646, Rragc, Ras-related GTP binding C, [RH, Score=408, Expect=2e-140]; ENSMUSG00000028278, Rragd, Ras-related GTP binding D, [RH, Score=399, Expect=5e-137]} {Dmel: FBgn0033272, RagC-D, Ras-related GTP binding C/D, [RH, Score=400, Expect=2e-137]} {Celegans: WBGene00012497, ragc-1, RAs-related GTP binding protein C homolog, [RH, Score=283, Expect=1e-92]} {Smed: dd_Smed_v6_5653_0_1, dd_Smed_v6_5653_0_1, [RH, Score=419, Expect=2e-145]} {RNA1509_9291} {RNA1310_15858.1} {RNA815_8637}
22. MligTC455_20788 562 11.71 Mlig455_023481

Neo: -

Age: logFC(26M/2M)=0.284

UBE2J1 0.954 - - - 0.954 - - Mlig455_023481 {REF} {Length: 3141} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=65.4]} {Human: ENSG00000198833, UBE2J1, ubiquitin conjugating enzyme E2 J1, [RH, Score=258, Expect=3e-84]} {Mouse: ENSMUSG00000028277, Ube2j1, ubiquitin-conjugating enzyme E2J 1, [RH, Score=261, Expect=1e-85]} {Dmel: FBgn0038515, CG5823, [Score=126, Expect=8e-34]} {Celegans: WBGene00006703, ubc-6, UBiquitin Conjugating enzyme, [RH, Score=263, Expect=1e-86]} {Smed: dd_Smed_v6_2788_0_1, dd_Smed_v6_2788_0_1, [RH, Score=304, Expect=1e-101]} {RNA1509_11687} {RNA1310_24163, RNA1509_11687} {RNA1509_11687, RNA815_16666}
23. MligTC455_49517 1358 28.3 Mlig455_023535

Neo: -

Age: Down-Up-Up

Region-enriched R4: 1.016/0.02180

0.954 - - - 0.954 - - Mlig455_023535 {REF} {Length: 686} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4535) [PF15054.8, score=31.6]} {RNA1509_12621, RNA1509_34633} {RNA1310_51889.1, RNA1509_12621, RNA1509_34633} {RNA1509_12621, RNA1509_34633, RNA815_26068}
24. MligTC455_51134 2716 56.59 Mlig455_005098, Mlig455_005212

Neo: Int S/G2/M

Age: -

0.954 - - - 0.954 - -

Mlig455_005098 {REF} {Length: 1934} {TRANSSPLICED} {Pfam: NADH:ubiquinone oxidoreductase, NDUFB6/B17 subunit [PF09782.11, score=59.0]} {Smed: dd_Smed_v6_1994_0_1, dd_Smed_v6_1994_0_1, [RH, Score=103, Expect=3e-27]} {RNA1509_5129} {RNA1310_21673} {RNA815_18893}

Mlig455_005212 {REF} {Length: 3289} {TRANSSPLICED} {Pfam: NADH:ubiquinone oxidoreductase, NDUFB6/B17 subunit [PF09782.11, score=59.0]} {Smed: dd_Smed_v6_1994_0_1, dd_Smed_v6_1994_0_1, [RH, Score=103, Expect=2e-27]} {RNA1509_19456, RNA1509_5129, RNA1509_57249} {RNA1310_21673, RNA1509_19456, RNA1509_5129, RNA1509_57249} {RNA1509_19456, RNA1509_5129, RNA1509_57249, RNA815_18893}
25. MligTC455_39553 478 9.95 Mlig455_069570

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R4: 1.662/0.00444

B3GNT5 0.953 - - - 0.953 - - Mlig455_069570 {REF} {Length: 3770} {TRANSSPLICED} {Pfam: Galactosyltransferase [PF01762.23, score=125.3]} {Human: ENSG00000176597, B3GNT5, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5, [RH, Score=130, Expect=3e-33]; ENSG00000198488, B3GNT6, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6, [RH, Score=124, Expect=6e-31]} {Mouse: ENSMUSG00000074004, B3gnt6, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase), [Score=118, Expect=6e-29]; ENSMUSG00000079445, B3gnt7, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7, [Score=117, Expect=1e-28]; ENSMUSG00000022686, B3gnt5, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5, [Score=114, Expect=1e-27]; ENSMUSG00000029431, B3gnt4, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4, [Score=113, Expect=1e-27]} {Dmel: FBgn0000221, brn, brainiac, [Score=133, Expect=3e-35]} {Celegans: WBGene00000270, bre-5, Beta-1,3-galactosyltransferase bre-5, [Score=107, Expect=6e-26]} {Smed: dd_Smed_v6_8163_0_1, dd_Smed_v6_8163_0_1, [RH, Score=243, Expect=4e-76]} {RNA1509_8889} {RNA1310_13743.1} {RNA815_1518.2}
26. MligTC455_34592 616 12.83 Mlig455_059606

Neo: -

Age: -

GMDS 0.952 - - - 0.952 - - Mlig455_059606 {REF} {Length: 3554} {TRANSSPLICED} {Pfam: GDP-mannose 4,6 dehydratase [PF16363.7, score=508.6]; NAD dependent epimerase/dehydratase family [PF01370.23, score=255.9]; RmlD substrate binding domain [PF04321.19, score=28.4]; Polysaccharide biosynthesis protein [PF02719.17, score=25.0]} {Human: ENSG00000112699, GMDS, GDP-mannose 4,6-dehydratase, [RH, Score=513, Expect=0.0]} {Mouse: ENSMUSG00000038372, Gmds, GDP-mannose 4, 6-dehydratase, [RH, Score=514, Expect=0.0]} {Dmel: FBgn0031661, Gmd, GDP-mannose 4,6-dehydratase, [RH, Score=526, Expect=0.0]} {Celegans: WBGene00000266, bre-1, GDP-mannose 4,6 dehydratase 1, [RH, Score=521, Expect=0.0]} {Smed: dd_Smed_v6_5709_0_1, dd_Smed_v6_5709_0_1, [RH, Score=531, Expect=0.0]} {RNA1509_9794} {RNA1310_25100} {RNA815_2155}
27. MligTC455_25003 427 8.9 Mlig455_011659

Neo: -

Age: -

MAP3K19 0.951 - - - - 0.951 - Mlig455_011659 {REF} {Length: 5884} {Pfam: Protein kinase domain [PF00069.27, score=305.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=256.4]; Ankyrin repeats (3 copies) [PF12796.9, score=75.6]; Caspase domain [PF00656.24, score=56.2]; Ankyrin repeats (many copies) [PF13857.8, score=53.1]; Ankyrin repeat [PF13606.8, score=52.2]; Ankyrin repeats (many copies) [PF13637.8, score=40.8]; Fungal protein kinase [PF17667.3, score=34.3]; Ankyrin repeat [PF00023.32, score=31.5]; Kinase-like [PF14531.8, score=29.8]; Ternary complex associated domain 9 [PF19974.1, score=24.2]; ABC1 atypical kinase-like domain [PF03109.18, score=22.3]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=140, Expect=2e-34]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=140, Expect=2e-34]} {Dmel: FBgn0024329, Mekk1, [Score=114, Expect=5e-25]} {Celegans: WBGene00003472, mtk-1, MTK1/MEKK4 homolog, [Score=116, Expect=8e-26]} {Smed: dd_Smed_v6_11735_0_1, dd_Smed_v6_11735_0_1, [RH, Score=113, Expect=2e-27]} {RNA1509_12652, RNA1509_6764} {RNA1310_1303.1, RNA1509_12652, RNA1509_6764} {RNA1509_12652, RNA1509_6764, RNA815_406.1}
28. MligTC455_20711 445 9.26 Mlig455_068698

Neo: -

Age: Up-Down-Down

Region-enriched R4: 1.877/0.04899

EPG5 0.95 - - - 0.950 - - Mlig455_068698 {REF} {Length: 10361} {TRANSSPLICED} {Human: ENSG00000152223, EPG5, ectopic P-granules autophagy protein 5 homolog, [RH, Score=543, Expect=7e-156]} {Mouse: ENSMUSG00000116023, Epg5, ectopic P-granules autophagy protein 5 homolog (C. elegans), [RH, Score=542, Expect=6e-156]; ENSMUSG00000039840, Epg5, ectopic P-granules autophagy protein 5 homolog (C. elegans), [RH, Score=542, Expect=6e-156]} {Dmel: FBgn0038651, Epg5, ectopic P-granules autophagy protein 5, [RH, Score=342, Expect=5e-94]} {Celegans: WBGene00016968, epg-5, Ectopic P granules protein 5, [RH, Score=138, Expect=3e-32]} {Smed: dd_Smed_v6_3273_0_1, dd_Smed_v6_3273_0_1, [RH, Score=405, Expect=9e-114]} {RNA1509_3973} {RNA1310_276.1} {RNA815_491}
29. MligTC455_44685 1642 34.22 Mlig455_021339

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.450

Region-enriched R5: 1.221/0.00008

0.95 - - - 0.950 - - Mlig455_021339 {REF} {Length: 465} {TRANSSPLICED} {Pfam: Tim10/DDP family zinc finger [PF02953.17, score=55.0]} {Celegans: WBGene00000941, ddp-1, Mitochondrial import inner membrane translocase subunit Tim8, [RH, Score=55.1, Expect=2e-11]} {Smed: dd_Smed_v6_514_0_1, dd_Smed_v6_514_0_1, [RH, Score=57.8, Expect=1e-12]} {RNA1509_7190} {RNA1310_25867.1, RNA1509_7190} {RNA1509_7190, RNA815_38759}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA