Data search
Results for MligTC455_28548
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_28548 | 722 | 15.05 | Mlig455_016447 | Neo: - Age: logFC(26M/2M)=-0.249 |
ZDHHC12 | Mlig455_016447 {REF} {Length: 2352} {TRANSSPLICED} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=113.7]} {Human: ENSG00000160446, ZDHHC12, zinc finger DHHC-type containing 12, [Score=108, Expect=1e-26]} {Mouse: ENSMUSG00000015335, Zdhhc12, zinc finger, DHHC domain containing 12, [Score=109, Expect=3e-27]} {Dmel: FBgn0259824, Hip14, Huntingtin-interacting protein 14, [Score=89.0, Expect=5e-19]} {Celegans: WBGene00012718, dhhc-8, Palmitoyltransferase, [Score=85.1, Expect=6e-18]} {Smed: dd_Smed_v6_1152_2_7, dd_Smed_v6_1152_2_7, [Score=188, Expect=6e-57]} {RNA1509_23908, RNA1509_28191, RNA1509_53040} {RNA1310_13212.1, RNA1509_23908, RNA1509_28191, RNA1509_53040} {RNA1509_23908, RNA1509_28191, RNA1509_53040, RNA815_7797.1} |
Cumulative graph for MligTC455_28548
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.72 | 4.179 | 0.49752 | 1.00000 | |
| RegionR2 | -0.311 | 4.179 | 0.45562 | 0.84347 | |
| RegionR3 | 0.182 | 4.179 | 0.57176 | 1.00000 | |
| RegionR4 | 0.749 | 4.179 | 0.04132 | 0.16926 | |
| RegionR5 | 0.514 | 4.179 | 0.07226 | 0.24357 | |
| RegionR6 | 0.088 | 4.179 | 0.79225 | 1.00000 | |
| RegionR7 | 0.844 | 4.179 | 0.03072 | 0.33319 | |
| RegionR8 | -1.346 | 4.179 | 0.04561 | 0.41914 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.496 | 4.179 | 0.77604 | 1.00000 | |
| RegenerationR2 | 0.164 | 4.179 | 0.61412 | 0.92077 | |
| RegenerationR3 | -0.152 | 4.179 | 0.66056 | 0.93337 | |
| RegenerationR4 | -0.41 | 4.179 | 0.23671 | 0.68565 | |
| RegenerationR5 | 0.263 | 4.179 | 0.38052 | 0.78699 | |
| RegenerationR6 | -0.206 | 4.179 | 0.58077 | 0.85793 | |
| RegenerationBL | 0.147 | 4.179 | 0.76413 | 1.00000 | |
| RegenerationTP | 0.143 | 4.179 | 0.79249 | 1.00000 |
Genes with expression patterns similar to MligTC455_28548
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_28548 | 722 | 15.05 | Mlig455_016447 | Neo: - Age: logFC(26M/2M)=-0.249 |
ZDHHC12 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_016447 {REF} {Length: 2352} {TRANSSPLICED} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=113.7]} {Human: ENSG00000160446, ZDHHC12, zinc finger DHHC-type containing 12, [Score=108, Expect=1e-26]} {Mouse: ENSMUSG00000015335, Zdhhc12, zinc finger, DHHC domain containing 12, [Score=109, Expect=3e-27]} {Dmel: FBgn0259824, Hip14, Huntingtin-interacting protein 14, [Score=89.0, Expect=5e-19]} {Celegans: WBGene00012718, dhhc-8, Palmitoyltransferase, [Score=85.1, Expect=6e-18]} {Smed: dd_Smed_v6_1152_2_7, dd_Smed_v6_1152_2_7, [Score=188, Expect=6e-57]} {RNA1509_23908, RNA1509_28191, RNA1509_53040} {RNA1310_13212.1, RNA1509_23908, RNA1509_28191, RNA1509_53040} {RNA1509_23908, RNA1509_28191, RNA1509_53040, RNA815_7797.1} |
| 2. | MligTC455_28007 | 1409 | 29.35 | Mlig455_001316 | Neo: - Age: - |
SQOR | 1.802 | - | - | - | - | 0.845 | 0.957 | Mlig455_001316 {REF} {Length: 1967} {Pfam: Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=70.5]; FAD-NAD(P)-binding [PF13454.8, score=20.3]} {Human: ENSG00000137767, SQOR, sulfide quinone oxidoreductase, [RH, Score=416, Expect=1e-142]} {Mouse: ENSMUSG00000005803, Sqor, sulfide quinone oxidoreductase, [RH, Score=397, Expect=1e-135]} {Dmel: FBgn0035515, CG14997, [RH, Score=387, Expect=1e-131]} {Celegans: WBGene00008538, sqrd-1, Sulfide Quinone oxidoReDuctase, [RH, Score=350, Expect=1e-117]} {Smed: dd_Smed_v6_4215_0_1, dd_Smed_v6_4215_0_1, [RH, Score=440, Expect=6e-153]} {RNA1509_26256} {RNA1310_11214} {RNA815_2609} |
| 3. | MligTC455_28006 | 2323 | 48.4 | Mlig455_001155 | Neo: - Age: Up-Down-Down |
SQOR | 1.747 | - | - | - | - | 0.785 | 0.962 | Mlig455_001155 {REF} {Length: 3324} {Pfam: Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=70.5]; FAD-NAD(P)-binding [PF13454.8, score=20.3]} {Human: ENSG00000137767, SQOR, sulfide quinone oxidoreductase, [RH, Score=416, Expect=1e-142]} {Mouse: ENSMUSG00000005803, Sqor, sulfide quinone oxidoreductase, [RH, Score=397, Expect=1e-135]} {Dmel: FBgn0035515, CG14997, [RH, Score=387, Expect=1e-131]} {Celegans: WBGene00008538, sqrd-1, Sulfide Quinone oxidoReDuctase, [RH, Score=350, Expect=1e-117]} {Smed: dd_Smed_v6_4215_0_1, dd_Smed_v6_4215_0_1, [RH, Score=440, Expect=6e-153]} {RNA1509_26256, RNA1509_3635} {RNA1310_13654, RNA1509_26256, RNA1509_3635} {RNA1509_26256, RNA1509_3635, RNA815_2609} |
| 4. | MligTC455_43479 | 1607 | 33.48 | Mlig455_036428, Mlig455_054599 | Neo: - Age: - |
ZNF208, ZNF99 | 1.7 | 0.748 | - | - | - | - | 0.952 | Mlig455_036428 {REF} {Length: 6075} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=173.2]; C2H2-type zinc finger [PF13894.8, score=143.5]; Zinc-finger double domain [PF13465.8, score=123.7]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=59.2]; C2H2-type zinc-finger domain [PF13909.8, score=22.8]} {Human: ENSG00000160321, ZNF208, zinc finger protein 208, [Score=186, Expect=1e-46]} {Mouse: ENSMUSG00000041258, Zfp236, zinc finger protein 236, [Score=202, Expect=2e-51]} {Dmel: FBgn0020309, crol, crooked legs, [Score=129, Expect=1e-29]} {Celegans: WBGene00018567, F47E1.3, [Score=80.1, Expect=8e-15]} {Smed: dd_Smed_v6_8871_0_1, dd_Smed_v6_8871_0_1, [RH, Score=190, Expect=3e-48]} {RNA1509_5233} {RNA1310_654.1} {RNA815_3048.1} Mlig455_054599 {REF} {Length: 6057} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=173.3]; C2H2-type zinc finger [PF13894.8, score=143.7]; Zinc-finger double domain [PF13465.8, score=124.4]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=59.3]; C2H2-type zinc-finger domain [PF13909.8, score=22.8]} {Human: ENSG00000213973, ZNF99, zinc finger protein 99, [Score=173, Expect=7e-43]} {Mouse: ENSMUSG00000041258, Zfp236, zinc finger protein 236, [Score=202, Expect=2e-51]} {Dmel: FBgn0020309, crol, crooked legs, [Score=129, Expect=1e-29]} {Celegans: WBGene00018567, F47E1.3, [Score=80.1, Expect=8e-15]} {Smed: dd_Smed_v6_8871_0_1, dd_Smed_v6_8871_0_1, [RH, Score=191, Expect=1e-48]} {RNA1509_5233} {RNA1310_654.1, RNA1509_5233} {RNA1509_5233, RNA815_3048.1} |
| 5. | MligTC455_49281 | 362 | 7.54 | Mlig455_020515 | Neo: - Age: - |
VAC14 | 0.967 | - | - | - | - | - | 0.967 | Mlig455_020515 {REF} {Length: 2719} {TRANSSPLICED} {Pfam: Vacuolar protein 14 C-terminal Fig4p binding [PF11916.10, score=177.4]; Vacuolar 14 Fab1-binding region [PF12755.9, score=110.3]; HEAT repeat [PF02985.24, score=33.1]; Dopey, N-terminal [PF04118.16, score=18.2]} {Human: ENSG00000103043, VAC14, Vac14, PIKFYVE complex component, [RH, Score=407, Expect=5e-131]} {Mouse: ENSMUSG00000010936, Vac14, Vac14 homolog (S. cerevisiae), [RH, Score=277, Expect=6e-82]} {Dmel: FBgn0038058, CG5608, [RH, Score=374, Expect=2e-119]} {Celegans: WBGene00010565, vacl-14, VAC (Yeast VACuole morphology)-Like, [RH, Score=322, Expect=6e-100]} {Smed: dd_Smed_v6_4616_0_1, dd_Smed_v6_4616_0_1, [RH, Score=190, Expect=3e-51]} {RNA1509_14711} {RNA1310_7953} {RNA815_10330} |
| 6. | MligTC455_15249 | 717 | 14.93 | Mlig455_066749 | Neo: - Age: - |
RBM12 | 0.966 | - | - | - | - | - | 0.966 | Mlig455_066749 {REF} {Length: 3255} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=27.4]} {Human: ENSG00000244462, RBM12, RNA binding motif protein 12, [Score=94.0, Expect=6e-19]; ENSG00000183808, RBM12B, RNA binding motif protein 12B, [Score=89.4, Expect=2e-17]} {Mouse: ENSMUSG00000089824, Rbm12, RNA binding motif protein 12, [Score=94.7, Expect=3e-19]; ENSMUSG00000098950, Gm28036, predicted gene, 28036, [Score=92.8, Expect=8e-19]} {Dmel: FBgn0035235, CG7879, [RH, Score=117, Expect=1e-26]} {Celegans: WBGene00013703, Y106G6D.7, [RH, Score=98.2, Expect=1e-20]} {Smed: dd_Smed_v6_5908_0_1, dd_Smed_v6_5908_0_1, [RH, Score=106, Expect=2e-23]} {RNA1509_7941} {RNA1310_4040.1} {RNA815_10772} |
| 7. | MligTC455_25368 | 399 | 8.31 | Mlig455_066596 | Neo: - Age: - |
PCNX1 | 0.959 | - | - | 0.959 | - | - | - | Mlig455_066596 {REF} {Length: 7559} {TRANSSPLICED} {Pfam: Pecanex protein (C-terminus) [PF05041.17, score=276.2]} {Human: ENSG00000100731, PCNX1, pecanex 1, [RH, Score=896, Expect=0.0]} {Mouse: ENSMUSG00000021140, Pcnx, pecanex homolog, [RH, Score=906, Expect=0.0]} {Dmel: FBgn0003048, pcx, pecanex, [RH, Score=523, Expect=2e-150]} {Celegans: WBGene00015237, B0511.12, [RH, Score=700, Expect=0.0]} {Smed: dd_Smed_v6_4696_0_1, dd_Smed_v6_4696_0_1, [RH, Score=734, Expect=0.0]} {RNA1509_3296, RNA1509_36439, RNA1509_54111} {RNA1310_315.1, RNA1509_3296, RNA1509_36439, RNA1509_54111} {RNA1509_3296, RNA1509_36439, RNA1509_54111, RNA815_192} |
| 8. | MligTC455_41991 | 456 | 9.5 | Mlig455_062277 | Neo: - Age: - |
NDST3 | 0.959 | - | - | - | 0.959 | - | - | Mlig455_062277 {REF} {Length: 5128} {Pfam: heparan sulfate-N-deacetylase [PF12062.10, score=456.8]; Sulfotransferase domain [PF00685.29, score=92.8]; Sulfotransferase family [PF13469.8, score=43.9]} {Human: ENSG00000164100, NDST3, N-deacetylase and N-sulfotransferase 3, [RH, Score=682, Expect=0.0]; ENSG00000166507, NDST2, N-deacetylase and N-sulfotransferase 2, [RH, Score=679, Expect=0.0]; ENSG00000070614, NDST1, N-deacetylase and N-sulfotransferase 1, [RH, Score=667, Expect=0.0]; ENSG00000138653, NDST4, N-deacetylase and N-sulfotransferase 4, [RH, Score=661, Expect=0.0]} {Mouse: ENSMUSG00000027977, Ndst3, N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3, [RH, Score=683, Expect=0.0]; ENSMUSG00000039308, Ndst2, N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2, [RH, Score=679, Expect=0.0]; ENSMUSG00000027971, Ndst4, N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4, [RH, Score=669, Expect=0.0]; ENSMUSG00000054008, Ndst1, N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1, [RH, Score=666, Expect=0.0]} {Dmel: FBgn0020251, sfl, sulfateless, [RH, Score=716, Expect=0.0]} {Celegans: WBGene00002028, hst-1, Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 Heparan sulfate N-deacetylase 1 Heparan sulfate N-sulfotransferase 1, [RH, Score=605, Expect=0.0]} {Smed: dd_Smed_v6_12192_0_2, dd_Smed_v6_12192_0_2, [RH, Score=541, Expect=8e-179]} {RNA1509_9775} {RNA1310_5396, RNA1509_9775} {RNA1509_9775, RNA815_1944} |
| 9. | MligTC455_21035 | 5404 | 112.59 | Mlig455_056024 | Neo: Int S/G2/M Age: - |
RPS29 | 0.955 | - | - | - | 0.955 | - | - | Mlig455_056024 {REF} {Length: 374} {TRANSSPLICED} {Pfam: Ribosomal protein S14p/S29e [PF00253.23, score=54.6]} {Human: ENSG00000213741, RPS29, ribosomal protein S29, [RH, Score=82.0, Expect=2e-22]} {Mouse: ENSMUSG00000034892, Rps29, ribosomal protein S29, [RH, Score=82.0, Expect=1e-22]} {Dmel: FBgn0261599, RpS29, Ribosomal protein S29, [RH, Score=97.1, Expect=1e-28]} {Celegans: WBGene00004498, rps-29, Ribosomal Protein, Small subunit, [RH, Score=82.4, Expect=4e-23]} {Smed: dd_Smed_v6_214_0_1, dd_Smed_v6_214_0_1, [RH, Score=91.7, Expect=7e-27]} {RNA1509_2258, RNA1509_42212, RNA1509_712} {RNA1310_95473, RNA1509_2258, RNA1509_42212, RNA1509_712} {RNA1509_2258, RNA1509_42212, RNA1509_712, RNA815_49240} |
| 10. | MligTC455_26695 | 4432 | 92.33 | Mlig455_054059 | Neo: Int S/G2/M Age: - Regeneration-upregulated BL: 1.025 Regeneration-enriched BL: 1.025 |
RUVBL2 | 0.955 | - | - | - | - | 0.955 | - | Mlig455_054059 {REF} {Length: 2930} {Pfam: TIP49 P-loop domain [PF06068.15, score=542.3]; TIP49 AAA-lid domain [PF17856.3, score=98.1]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=33.6]; AAA ATPase domain [PF13191.8, score=28.2]; DnaB-like helicase C terminal domain [PF03796.17, score=26.9]; AAA domain (dynein-related subfamily) [PF07728.16, score=25.9]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=25.2]; AAA domain [PF13245.8, score=24.4]; AAA domain [PF13401.8, score=23.0]; Sigma-54 interaction domain [PF00158.28, score=21.9]; Magnesium chelatase, subunit ChlI [PF01078.23, score=21.0]; AAA domain [PF13481.8, score=21.0]} {Human: ENSG00000183207, RUVBL2, RuvB like AAA ATPase 2, [RH, Score=806, Expect=0.0]} {Mouse: ENSMUSG00000003868, Ruvbl2, RuvB-like protein 2, [RH, Score=805, Expect=0.0]} {Dmel: FBgn0040075, rept, reptin, [RH, Score=748, Expect=0.0]} {Celegans: WBGene00020687, ruvb-2, RuvB-like 2, [RH, Score=565, Expect=0.0]} {Smed: dd_Smed_v6_2547_0_1, dd_Smed_v6_2547_0_1, [RH, Score=739, Expect=0.0]} {RNA1509_12047, RNA1509_20050, RNA1509_3839, RNA1509_46278, RNA1509_7349} {RNA1310_13037, RNA1509_12047, RNA1509_20050, RNA1509_3839, RNA1509_46278, RNA1509_7349} {RNA1509_12047, RNA1509_20050, RNA1509_3839, RNA1509_46278, RNA1509_7349, RNA815_5004.1} |
| 11. | MligTC455_44628 | 997 | 20.78 | Mlig455_066238 | Neo: - Age: Up-Down-Down |
0.954 | - | - | - | 0.954 | - | - | Mlig455_066238 {REF} {Length: 1023} {NoTransDecoderORF} {RNA1509_6977} {RNA1310_30202.1} {RNA815_30691} | |
| 12. | MligTC455_33115 | 1733 | 36.1 | Mlig455_063150 | Neo: - Age: - |
GSTK1 | 0.952 | - | - | - | - | 0.952 | - | Mlig455_063150 {REF} {Length: 996} {TRANSSPLICED} {Pfam: DSBA-like thioredoxin domain [PF01323.22, score=144.1]} {Human: ENSG00000197448, GSTK1, glutathione S-transferase kappa 1, [RH, Score=197, Expect=4e-63]} {Mouse: ENSMUSG00000029864, Gstk1, glutathione S-transferase kappa 1, [RH, Score=183, Expect=6e-58]} {Celegans: WBGene00014251, gstk-1, Glutathione S-transferase kappa 1, [RH, Score=139, Expect=4e-41]} {RNA1509_14099, RNA1509_15369} {RNA1310_36089, RNA1509_14099, RNA1509_15369} {RNA1509_14099, RNA1509_15369, RNA815_16313} |
| 13. | MligTC455_21562 | 1621 | 33.76 | Mlig455_060592 | Neo: - Age: - Region-enriched R5: 1.227/0.00001 |
SCAMP1 | 0.951 | - | - | 0.951 | - | - | - | Mlig455_060592 {REF} {Length: 3000} {TRANSSPLICED} {Pfam: SCAMP family [PF04144.15, score=200.1]} {Human: ENSG00000085365, SCAMP1, secretory carrier membrane protein 1, [RH, Score=261, Expect=6e-85]; ENSG00000140497, SCAMP2, secretory carrier membrane protein 2, [RH, Score=248, Expect=6e-80]} {Mouse: ENSMUSG00000021687, Scamp1, secretory carrier membrane protein 1, [RH, Score=262, Expect=2e-85]} {Dmel: FBgn0040285, Scamp, [RH, Score=235, Expect=6e-75]} {Celegans: WBGene00004743, scm-1, Secretory carrier-associated membrane protein, [Score=192, Expect=2e-58]} {Smed: dd_Smed_v6_8593_0_1, dd_Smed_v6_8593_0_1, [RH, Score=238, Expect=5e-77]} {RNA1509_19649} {RNA1310_11060.1} {RNA815_1980.1} |
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