Data search
Results for MligTC455_28558
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_28558 | 613 | 12.76 | Mlig455_030185 | Neo: - Age: - |
GMPS | Mlig455_030185 {REF} {Length: 2936} {TRANSSPLICED} {Pfam: Glutamine amidotransferase class-I [PF00117.30, score=117.7]; GMP synthase C terminal domain [PF00958.24, score=57.0]; Peptidase C26 [PF07722.15, score=49.2]; NAD synthase [PF02540.19, score=29.8]; Asparagine synthase [PF00733.23, score=24.2]; Queuosine biosynthesis protein QueC [PF06508.15, score=23.0]; tRNA methyl transferase [PF03054.18, score=19.0]} {Human: ENSG00000163655, GMPS, guanine monophosphate synthase, [RH, Score=733, Expect=0.0]} {Mouse: ENSMUSG00000027823, Gmps, guanine monophosphate synthetase, [RH, Score=736, Expect=0.0]} {Dmel: FBgn0000239, bur, burgundy, [RH, Score=714, Expect=0.0]} {Celegans: WBGene00010912, gmps-1, Probable GMP synthase [glutamine-hydrolyzing], [RH, Score=632, Expect=0.0]} {Smed: dd_Smed_v6_5054_0_1, dd_Smed_v6_5054_0_1, [RH, Score=701, Expect=0.0]} {RNA1509_11658} {RNA1310_4718, RNA1509_11658} {RNA1509_11658, RNA815_2186} |
Cumulative graph for MligTC455_28558
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.853 | 3.964 | 0.47534 | 1.00000 | |
| RegionR2 | -0.003 | 3.964 | 0.99545 | 1.00000 | |
| RegionR3 | -0.095 | 3.964 | 0.78972 | 1.00000 | |
| RegionR4 | 0.048 | 3.964 | 0.90915 | 1.00000 | |
| RegionR5 | 0.561 | 3.964 | 0.06567 | 0.22772 | |
| RegionR6 | -0.054 | 3.964 | 0.88536 | 1.00000 | |
| RegionR7 | 0.003 | 3.964 | 0.99430 | 1.00000 | |
| RegionR8 | 0.394 | 3.964 | 0.46365 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.134 | 3.964 | 0.94445 | 1.00000 | |
| RegenerationR2 | -0.773 | 3.964 | 0.04645 | 0.35610 | |
| RegenerationR3 | -0.067 | 3.964 | 0.86818 | 1.00000 | |
| RegenerationR4 | 0.33 | 3.964 | 0.42026 | 0.82565 | |
| RegenerationR5 | 0.389 | 3.964 | 0.24966 | 0.68319 | |
| RegenerationR6 | 0.736 | 3.964 | 0.06654 | 0.32372 | |
| RegenerationBL | -0.663 | 3.964 | 0.25324 | 0.60996 | |
| RegenerationTP | -0.269 | 3.964 | 0.61311 | 0.96835 |
Genes with expression patterns similar to MligTC455_28558
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_28558 | 613 | 12.76 | Mlig455_030185 | Neo: - Age: - |
GMPS | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_030185 {REF} {Length: 2936} {TRANSSPLICED} {Pfam: Glutamine amidotransferase class-I [PF00117.30, score=117.7]; GMP synthase C terminal domain [PF00958.24, score=57.0]; Peptidase C26 [PF07722.15, score=49.2]; NAD synthase [PF02540.19, score=29.8]; Asparagine synthase [PF00733.23, score=24.2]; Queuosine biosynthesis protein QueC [PF06508.15, score=23.0]; tRNA methyl transferase [PF03054.18, score=19.0]} {Human: ENSG00000163655, GMPS, guanine monophosphate synthase, [RH, Score=733, Expect=0.0]} {Mouse: ENSMUSG00000027823, Gmps, guanine monophosphate synthetase, [RH, Score=736, Expect=0.0]} {Dmel: FBgn0000239, bur, burgundy, [RH, Score=714, Expect=0.0]} {Celegans: WBGene00010912, gmps-1, Probable GMP synthase [glutamine-hydrolyzing], [RH, Score=632, Expect=0.0]} {Smed: dd_Smed_v6_5054_0_1, dd_Smed_v6_5054_0_1, [RH, Score=701, Expect=0.0]} {RNA1509_11658} {RNA1310_4718, RNA1509_11658} {RNA1509_11658, RNA815_2186} |
| 2. | MligTC455_28557 | 612 | 12.75 | Mlig455_030120 | Neo: - Age: - |
GMPS | 5.992 | 1.000 | 0.996 | 1.000 | 1.000 | 0.997 | 0.999 | Mlig455_030120 {REF} {Length: 2925} {TRANSSPLICED} {Pfam: Glutamine amidotransferase class-I [PF00117.30, score=117.7]; GMP synthase C terminal domain [PF00958.24, score=57.0]; Peptidase C26 [PF07722.15, score=49.2]; NAD synthase [PF02540.19, score=29.8]; Asparagine synthase [PF00733.23, score=24.2]; Queuosine biosynthesis protein QueC [PF06508.15, score=23.1]; tRNA methyl transferase [PF03054.18, score=19.0]} {Human: ENSG00000163655, GMPS, guanine monophosphate synthase, [RH, Score=733, Expect=0.0]} {Mouse: ENSMUSG00000027823, Gmps, guanine monophosphate synthetase, [RH, Score=736, Expect=0.0]} {Dmel: FBgn0000239, bur, burgundy, [RH, Score=714, Expect=0.0]} {Celegans: WBGene00010912, gmps-1, Probable GMP synthase [glutamine-hydrolyzing], [RH, Score=628, Expect=0.0]} {Smed: dd_Smed_v6_5054_0_1, dd_Smed_v6_5054_0_1, [RH, Score=701, Expect=0.0]} {RNA1509_11658} {RNA1310_4718} {RNA815_2186} |
| 3. | MligTC455_44505 | 766 | 15.96 | Mlig455_006545 | Neo: Irradiation Age: - Region-enriched R5: 1.371/0.00002 |
NUP107 | 1.823 | - | - | - | 0.967 | - | 0.856 | Mlig455_006545 {REF} {Length: 8013} {Pfam: Nuclear pore protein 84 / 107 [PF04121.15, score=367.2]} {Human: ENSG00000111581, NUP107, nucleoporin 107, [RH, Score=359, Expect=3e-109]} {Mouse: ENSMUSG00000052798, Nup107, nucleoporin 107, [RH, Score=358, Expect=1e-108]} {Dmel: FBgn0027868, Nup107, Nucleoporin 107kD, [RH, Score=265, Expect=3e-75]} {Smed: dd_Smed_v6_5070_0_1, dd_Smed_v6_5070_0_1, [RH, Score=206, Expect=3e-55]} {RNA1509_22557, RNA1509_33997, RNA1509_55961, RNA1509_7073} {RNA1310_4995, RNA1509_22557, RNA1509_33997, RNA1509_55961, RNA1509_7073} {RNA1509_22557, RNA1509_33997, RNA1509_55961, RNA1509_7073, RNA815_1737} |
| 4. | MligTC455_29527 | 1639 | 34.14 | Mlig455_019632, Mlig455_059057 | Neo: Int S/G2/M Age: - |
ACIN1 | 1.813 | - | - | 0.856 | 0.957 | - | - | Mlig455_019632 {REF} {Length: 3355} {TRANSSPLICED} {Pfam: RNSP1-SAP18 binding (RSB) motif [PF16294.7, score=56.5]} {Human: ENSG00000100813, ACIN1, apoptotic chromatin condensation inducer 1, [RH, Score=74.7, Expect=2e-13]} {Mouse: ENSMUSG00000022185, Acin1, apoptotic chromatin condensation inducer 1, [RH, Score=74.7, Expect=1e-13]} {Dmel: FBgn0263198, Acn, Acinus, [RH, Score=94.0, Expect=7e-20]} {Smed: dd_Smed_v6_4153_0_1, dd_Smed_v6_4153_0_1, [RH, Score=79.0, Expect=2e-15]} {RNA1509_6966} {RNA1310_4635} {RNA815_5975} Mlig455_059057 {REF} {Length: 3216} {TRANSSPLICED} {Pfam: RNSP1-SAP18 binding (RSB) motif [PF16294.7, score=56.0]} {Human: ENSG00000100813, ACIN1, apoptotic chromatin condensation inducer 1, [RH, Score=74.3, Expect=3e-13]} {Mouse: ENSMUSG00000022185, Acin1, apoptotic chromatin condensation inducer 1, [RH, Score=74.7, Expect=1e-13]} {Dmel: FBgn0263198, Acn, Acinus, [RH, Score=93.6, Expect=9e-20]} {Smed: dd_Smed_v6_4153_0_1, dd_Smed_v6_4153_0_1, [RH, Score=78.2, Expect=3e-15]} {RNA1509_13971, RNA1509_42058, RNA1509_51683, RNA1509_6966} {RNA1310_4635, RNA1509_13971, RNA1509_42058, RNA1509_51683, RNA1509_6966} {RNA1509_13971, RNA1509_42058, RNA1509_51683, RNA1509_6966, RNA815_5975} |
| 5. | MligTC455_26462 | 731 | 15.22 | Mlig455_005608, Mlig455_014452, Mlig455_070389 | Neo: - Age: - Region-enriched R7: 1.475/0.00853 |
1.795 | - | - | - | 0.832 | - | 0.963 | Mlig455_005608 {REF} {Length: 4206} {Pfam: Phytochelatin synthase [PF05023.16, score=265.8]} {Celegans: WBGene00003960, pcs-1, PhytoChelatin Synthase, [RH, Score=236, Expect=3e-71]} {Smed: dd_Smed_v6_11700_0_1, dd_Smed_v6_11700_0_1, [RH, Score=290, Expect=1e-91]} {RNA1509_24601, RNA1509_44343, RNA1509_47694} {RNA1310_2075.1, RNA1509_44343, RNA1509_47694} {RNA1509_44343, RNA1509_47694, RNA815_19183} Mlig455_014452 {REF} {Length: 4945} {TRANSSPLICED} {Pfam: Phytochelatin synthase [PF05023.16, score=267.3]} {Celegans: WBGene00003960, pcs-1, PhytoChelatin Synthase, [RH, Score=236, Expect=6e-73]} {Smed: dd_Smed_v6_11700_0_1, dd_Smed_v6_11700_0_1, [RH, Score=290, Expect=3e-93]} {RNA1509_24601} {RNA1310_2075.1, RNA1509_24601} {RNA1509_24601, RNA815_19183} Mlig455_070389 {REF} {Length: 4463} {TRANSSPLICED} {Pfam: Phytochelatin synthase [PF05023.16, score=267.3]} {Celegans: WBGene00003960, pcs-1, PhytoChelatin Synthase, [RH, Score=236, Expect=6e-73]} {Smed: dd_Smed_v6_11700_0_1, dd_Smed_v6_11700_0_1, [RH, Score=290, Expect=3e-93]} {RNA1509_24601} {RNA1310_2075.1} {RNA815_19183} |
|
| 6. | MligTC455_04754 | 453 | 9.43 | Mlig455_040547 | Neo: - Age: logFC(26M/2M)=0.893 |
1.749 | - | - | 0.798 | 0.951 | - | - | Mlig455_040547 {REF} {Length: 1120} {RNA1509_39732} {RNA1310_1334} {RNA815_47344.2} | |
| 7. | MligTC455_13364 | 306 | 6.37 | Mlig455_000613 | Neo: - Age: Up-Down-Up |
CTNS | 1.698 | - | - | - | 0.748 | - | 0.950 | Mlig455_000613 {REF} {Length: 2822} {TRANSSPLICED} {Pfam: PQ loop repeat [PF04193.16, score=113.4]} {Human: ENSG00000040531, CTNS, cystinosin, lysosomal cystine transporter, [RH, Score=298, Expect=1e-97]} {Mouse: ENSMUSG00000005949, Ctns, cystinosis, nephropathic, [RH, Score=275, Expect=4e-89]} {Dmel: FBgn0039045, CG17119, [RH, Score=281, Expect=4e-91]} {Celegans: WBGene00008052, ctns-1, Cystinosin homolog, [RH, Score=237, Expect=1e-74]} {Smed: dd_Smed_v6_4571_0_1, dd_Smed_v6_4571_0_1, [RH, Score=286, Expect=5e-94]} {RNA1509_18671, RNA1509_54356} {RNA1310_24837, RNA1509_18671, RNA1509_54356} {RNA1509_18671, RNA1509_54356, RNA815_14149} |
| 8. | MligTC455_50826 | 546 | 11.38 | Mlig455_008149 | Neo: Int S/G2/M |
RASA1 | 1.69 | - | - | - | 0.958 | - | 0.732 | Mlig455_008149 {REF} {Length: 5538} {Pfam: SH2 domain [PF00017.26, score=55.8]; GTPase-activator protein for Ras-like GTPase [PF00616.21, score=37.5]; PH domain [PF00169.31, score=34.6]; SH3 domain [PF00018.30, score=28.2]; Variant SH3 domain [PF07653.19, score=21.2]} {Human: ENSG00000145715, RASA1, RAS p21 protein activator 1, [RH, Score=237, Expect=2e-65]} {Mouse: ENSMUSG00000021549, Rasa1, RAS p21 protein activator 1, [RH, Score=236, Expect=1e-64]} {Dmel: FBgn0003969, vap, vacuolar peduncle, [RH, Score=231, Expect=3e-63]} {Celegans: WBGene00001516, gap-2, Ras GTPase-activating protein gap-2, [Score=58.2, Expect=2e-08]} {Smed: dd_Smed_v6_11115_0_3, dd_Smed_v6_11115_0_3, [Score=59.7, Expect=7e-09]} {RNA1509_23768, RNA1509_42857, RNA1509_55861, RNA1509_8665} {RNA1310_5186.1, RNA1509_23768, RNA1509_42857, RNA1509_55861, RNA1509_8665} {RNA1509_23768, RNA1509_42857, RNA1509_55861, RNA1509_8665, RNA815_1157} |
| 9. | MligTC455_50413 | 1599 | 33.31 | Mlig455_009964 | Neo: Neoblast Age: Down-Down-Up |
SUMO3 | 0.968 | - | - | - | 0.968 | - | - | Mlig455_009964 {REF} {Length: 1094} {TRANSSPLICED} {Pfam: Ubiquitin-2 like Rad60 SUMO-like [PF11976.10, score=76.8]; Ubiquitin family [PF00240.25, score=39.5]} {Human: ENSG00000184900, SUMO3, small ubiquitin-like modifier 3, [RH, Score=113, Expect=9e-34]; ENSG00000188612, SUMO2, small ubiquitin-like modifier 2, [RH, Score=111, Expect=6e-33]} {Mouse: ENSMUSG00000020265, Sumo3, small ubiquitin-like modifier 3, [RH, Score=115, Expect=1e-34]; ENSMUSG00000020738, Sumo2, small ubiquitin-like modifier 2, [RH, Score=111, Expect=4e-33]} {Dmel: FBgn0264922, smt3, [RH, Score=119, Expect=1e-36]} {Celegans: WBGene00004888, smo-1, Small ubiquitin-related modifier, [RH, Score=93.6, Expect=2e-26]} {Smed: dd_Smed_v6_265_0_1, dd_Smed_v6_265_0_1, [RH, Score=143, Expect=4e-46]} {RNA1509_36383, RNA1509_9891} {RNA1310_33911, RNA1509_36383} {RNA1509_36383, RNA815_5193} |
| 10. | MligTC455_46994 | 686 | 14.29 | Mlig455_013424 | Neo: - Age: logFC(26M/2M)=0.244 |
USB1 | 0.965 | - | - | - | 0.965 | - | - | Mlig455_013424 {REF} {Length: 2174} {TRANSSPLICED} {Pfam: Uncharacterised conserved protein [PF09749.11, score=129.4]} {Human: ENSG00000103005, USB1, U6 snRNA biogenesis phosphodiesterase 1, [RH, Score=114, Expect=5e-30]} {Mouse: ENSMUSG00000031792, Usb1, U6 snRNA biogenesis 1, [RH, Score=119, Expect=2e-32]} {Dmel: FBgn0037713, CG16790, [RH, Score=120, Expect=6e-33]} {RNA1509_15516, RNA1509_23851, RNA1509_29722} {RNA1310_12885.1, RNA1509_15516, RNA1509_23851, RNA1509_29722} {RNA1509_15516, RNA1509_23851, RNA1509_29722, RNA815_5897} |
| 11. | MligTC455_20753 | 657 | 13.69 | Mlig455_062670 | Neo: Irradiation Age: Up-Down-Down Region-enriched R5: 1.500/0.00906 |
ZC3H3 | 0.96 | - | - | - | 0.960 | - | - | Mlig455_062670 {REF} {Length: 4965} {TRANSSPLICED} {Pfam: WWE domain [PF02825.22, score=21.2]} {Human: ENSG00000014164, ZC3H3, zinc finger CCCH-type containing 3, [Score=52.0, Expect=6e-06]} {RNA1509_28005} {RNA1310_18286, RNA1509_28005} {RNA1509_28005, RNA815_8747} |
| 12. | MligTC455_49328 | 397 | 8.28 | Mlig455_024822 | Neo: - Age: Down-Up-Up |
SARNP | 0.96 | - | - | - | 0.960 | - | - | Mlig455_024822 {REF} {Length: 2186} {TRANSSPLICED} {Pfam: Tho1/MOS11 C-terminal domain [PF18592.3, score=39.7]; SAP domain [PF02037.29, score=38.8]; SAP domain-containing new25 [PF18953.2, score=27.2]} {Human: ENSG00000205323, SARNP, SAP domain containing ribonucleoprotein, [Score=50.1, Expect=2e-06]} {Mouse: ENSMUSG00000078427, Sarnp, SAP domain containing ribonucleoprotein, [Score=48.5, Expect=3e-06]; ENSMUSG00000051255, Gm6563, predicted pseudogene 6563, [Score=48.5, Expect=3e-06]} {Smed: dd_Smed_v6_2297_0_1, dd_Smed_v6_2297_0_1, [Score=64.7, Expect=9e-12]} {RNA1509_12023} {RNA1310_24293, RNA1509_12023} {RNA1509_12023, RNA815_8482} |
| 13. | MligTC455_35847 | 882 | 18.38 | Mlig455_004441, Mlig455_004451 | Neo: - Age: logFC(26M/2M)=-0.229 |
KATNB1 | 0.958 | - | - | - | 0.958 | - | - | Mlig455_004441 {REF} {Length: 4219} {Pfam: con80 domain of Katanin [PF13925.8, score=131.9]; WD domain, G-beta repeat [PF00400.34, score=106.3]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=46.1]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=20.8]; Cytochrome D1 heme domain [PF02239.18, score=17.5]} {Human: ENSG00000140854, KATNB1, katanin regulatory subunit B1, [Score=419, Expect=7e-138]} {Mouse: ENSMUSG00000031787, Katnb1, katanin p80 (WD40-containing) subunit B 1, [Score=410, Expect=1e-134]} {Dmel: FBgn0040207, kat80, katanin 80, [Score=167, Expect=2e-43]} {Celegans: WBGene00006481, plrg-1, PLeiotropic ReGulator (Vertebrate) homolog, [Score=98.2, Expect=2e-21]} {Smed: dd_Smed_v6_5495_0_1, dd_Smed_v6_5495_0_1, [Score=357, Expect=2e-114]} {RNA1509_34529, RNA1509_39659, RNA1509_44028, RNA1509_52734, RNA1509_59605} {RNA1310_6601, RNA1509_39659, RNA1509_44028, RNA1509_52734, RNA1509_59605} {RNA1509_39659, RNA1509_44028, RNA1509_52734, RNA1509_59605, RNA815_13009} Mlig455_004451 {REF} {Length: 4732} {Pfam: con80 domain of Katanin [PF13925.8, score=133.5]; WD domain, G-beta repeat [PF00400.34, score=109.9]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=44.9]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=19.6]; Cytochrome D1 heme domain [PF02239.18, score=17.5]} {Human: ENSG00000140854, KATNB1, katanin regulatory subunit B1, [Score=426, Expect=2e-140]} {Mouse: ENSMUSG00000031787, Katnb1, katanin p80 (WD40-containing) subunit B 1, [Score=414, Expect=6e-136]} {Dmel: FBgn0040207, kat80, katanin 80, [Score=170, Expect=3e-44]} {Celegans: WBGene00006481, plrg-1, PLeiotropic ReGulator (Vertebrate) homolog, [Score=101, Expect=2e-22]} {Smed: dd_Smed_v6_5495_0_1, dd_Smed_v6_5495_0_1, [Score=362, Expect=2e-116]} {RNA1509_17080, RNA1509_52675} {RNA1310_6601, RNA1509_52675} {RNA1509_52675, RNA815_13009} |
| 14. | MligTC455_28897 | 308 | 6.42 | Mlig455_030032 | Neo: - Age: Up-Up-Up, logFC(26M/2M)=1.123 Region-enriched R3: 2.756/0.00353 |
URGCP | 0.95 | - | - | - | 0.950 | - | - | Mlig455_030032 {REF} {Length: 7627} {TRANSSPLICED} {Pfam: Root hair defective 3 GTP-binding protein (RHD3) [PF05879.14, score=27.6]; Dynamin family [PF00350.25, score=22.0]; 50S ribosome-binding GTPase [PF01926.25, score=20.2]; Guanylate-binding protein, N-terminal domain [PF02263.21, score=19.7]} {Human: ENSG00000106608, URGCP, upregulator of cell proliferation, [Score=116, Expect=1e-25]} {Mouse: ENSMUSG00000078606, Gm4070, predicted gene 4070, [Score=515, Expect=5e-151]; ENSMUSG00000045868, Gvin1, GTPase, very large interferon inducible 1, [Score=513, Expect=2e-150]} {RNA1509_16396} {RNA1310_766.1} {RNA815_2094.1} |
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