Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_28566 | 9187 | 191.39 | Mlig455_064915, Mlig455_066841 | Neo: - Age: - |
PPP1CA | Mlig455_064915 {REF} {Length: 2044} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=141.6]; Serine-threonine protein phosphatase N-terminal domain [PF16891.7, score=81.0]} {Human: ENSG00000172531, PPP1CA, protein phosphatase 1 catalytic subunit alpha, [RH, Score=629, Expect=0.0]; ENSG00000186298, PPP1CC, protein phosphatase 1 catalytic subunit gamma, [RH, Score=620, Expect=0.0]; ENSG00000213639, PPP1CB, protein phosphatase 1 catalytic subunit beta, [RH, Score=603, Expect=0.0]} {Mouse: ENSMUSG00000096994, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [RH, Score=628, Expect=0.0]; ENSMUSG00000040385, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [RH, Score=628, Expect=0.0]; ENSMUSG00000004455, Ppp1cc, protein phosphatase 1 catalytic subunit gamma, [RH, Score=620, Expect=0.0]; ENSMUSG00000014956, Ppp1cb, protein phosphatase 1 catalytic subunit beta, [RH, Score=603, Expect=0.0]} {Dmel: FBgn0003134, Pp1alpha-96A, Protein phosphatase 1alpha at 96A, [RH, Score=612, Expect=0.0]} {Celegans: WBGene00001748, gsp-2, Serine/threonine-protein phosphatase PP1-beta, [RH, Score=624, Expect=0.0]} {Smed: dd_Smed_v6_1407_0_1, dd_Smed_v6_1407_0_1, [RH, Score=645, Expect=0.0]} {RNA1509_5157, RNA1509_698, RNA1509_9320} {RNA1310_2800.1, RNA1509_5157, RNA1509_9320} {RNA1509_5157, RNA1509_9320, RNA815_569.1} Mlig455_066841 {REF} {Length: 2077} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=141.6]; Serine-threonine protein phosphatase N-terminal domain [PF16891.7, score=81.0]} {Human: ENSG00000172531, PPP1CA, protein phosphatase 1 catalytic subunit alpha, [RH, Score=629, Expect=0.0]; ENSG00000186298, PPP1CC, protein phosphatase 1 catalytic subunit gamma, [RH, Score=620, Expect=0.0]; ENSG00000213639, PPP1CB, protein phosphatase 1 catalytic subunit beta, [RH, Score=603, Expect=0.0]} {Mouse: ENSMUSG00000096994, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [RH, Score=628, Expect=0.0]; ENSMUSG00000040385, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [RH, Score=628, Expect=0.0]; ENSMUSG00000004455, Ppp1cc, protein phosphatase 1 catalytic subunit gamma, [RH, Score=620, Expect=0.0]; ENSMUSG00000014956, Ppp1cb, protein phosphatase 1 catalytic subunit beta, [RH, Score=603, Expect=0.0]} {Dmel: FBgn0003134, Pp1alpha-96A, Protein phosphatase 1alpha at 96A, [RH, Score=612, Expect=0.0]} {Celegans: WBGene00001748, gsp-2, Serine/threonine-protein phosphatase PP1-beta, [RH, Score=624, Expect=0.0]} {Smed: dd_Smed_v6_1407_0_1, dd_Smed_v6_1407_0_1, [RH, Score=645, Expect=0.0]} {RNA1509_24147, RNA1509_48211, RNA1509_5572, RNA1509_6169, RNA1509_698} {RNA1310_2800.1, RNA1509_24147, RNA1509_48211, RNA1509_5572, RNA1509_6169, RNA1509_698} {RNA1509_24147, RNA1509_48211, RNA1509_5572, RNA1509_6169, RNA1509_698, RNA815_569.1} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -0.113 | 7.714 | 0.76855 | 1.00000 | |
RegionR2 | -0.032 | 7.714 | 0.89706 | 1.00000 | |
RegionR3 | 0.086 | 7.714 | 0.67871 | 1.00000 | |
RegionR4 | 0.829 | 7.714 | 0.00034 | 0.00439 | |
RegionR5 | -0.012 | 7.714 | 0.95211 | 1.00000 | |
RegionR6 | -0.015 | 7.714 | 0.94170 | 1.00000 | |
RegionR7 | -0.578 | 7.714 | 0.01179 | 0.18972 | |
RegionR8 | -0.165 | 7.714 | 0.51635 | 1.00000 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | -1.487 | 7.714 | 0.01589 | 0.53148 | |
RegenerationR2 | 0.05 | 7.714 | 0.84050 | 1.00000 | |
RegenerationR3 | -0.003 | 7.714 | 0.98996 | 1.00000 | |
RegenerationR4 | -0.46 | 7.714 | 0.08484 | 0.46010 | |
RegenerationR5 | 0.002 | 7.714 | 0.99477 | 1.00000 | |
RegenerationR6 | 0.167 | 7.714 | 0.52244 | 0.82215 | |
RegenerationBL | 0.535 | 7.714 | 0.02364 | 0.16887 | |
RegenerationTP | 0.064 | 7.714 | 0.81403 | 1.00000 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_28566 | 9187 | 191.39 | Mlig455_064915, Mlig455_066841 | Neo: - Age: - |
PPP1CA | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_064915 {REF} {Length: 2044} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=141.6]; Serine-threonine protein phosphatase N-terminal domain [PF16891.7, score=81.0]} {Human: ENSG00000172531, PPP1CA, protein phosphatase 1 catalytic subunit alpha, [RH, Score=629, Expect=0.0]; ENSG00000186298, PPP1CC, protein phosphatase 1 catalytic subunit gamma, [RH, Score=620, Expect=0.0]; ENSG00000213639, PPP1CB, protein phosphatase 1 catalytic subunit beta, [RH, Score=603, Expect=0.0]} {Mouse: ENSMUSG00000096994, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [RH, Score=628, Expect=0.0]; ENSMUSG00000040385, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [RH, Score=628, Expect=0.0]; ENSMUSG00000004455, Ppp1cc, protein phosphatase 1 catalytic subunit gamma, [RH, Score=620, Expect=0.0]; ENSMUSG00000014956, Ppp1cb, protein phosphatase 1 catalytic subunit beta, [RH, Score=603, Expect=0.0]} {Dmel: FBgn0003134, Pp1alpha-96A, Protein phosphatase 1alpha at 96A, [RH, Score=612, Expect=0.0]} {Celegans: WBGene00001748, gsp-2, Serine/threonine-protein phosphatase PP1-beta, [RH, Score=624, Expect=0.0]} {Smed: dd_Smed_v6_1407_0_1, dd_Smed_v6_1407_0_1, [RH, Score=645, Expect=0.0]} {RNA1509_5157, RNA1509_698, RNA1509_9320} {RNA1310_2800.1, RNA1509_5157, RNA1509_9320} {RNA1509_5157, RNA1509_9320, RNA815_569.1} Mlig455_066841 {REF} {Length: 2077} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=141.6]; Serine-threonine protein phosphatase N-terminal domain [PF16891.7, score=81.0]} {Human: ENSG00000172531, PPP1CA, protein phosphatase 1 catalytic subunit alpha, [RH, Score=629, Expect=0.0]; ENSG00000186298, PPP1CC, protein phosphatase 1 catalytic subunit gamma, [RH, Score=620, Expect=0.0]; ENSG00000213639, PPP1CB, protein phosphatase 1 catalytic subunit beta, [RH, Score=603, Expect=0.0]} {Mouse: ENSMUSG00000096994, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [RH, Score=628, Expect=0.0]; ENSMUSG00000040385, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [RH, Score=628, Expect=0.0]; ENSMUSG00000004455, Ppp1cc, protein phosphatase 1 catalytic subunit gamma, [RH, Score=620, Expect=0.0]; ENSMUSG00000014956, Ppp1cb, protein phosphatase 1 catalytic subunit beta, [RH, Score=603, Expect=0.0]} {Dmel: FBgn0003134, Pp1alpha-96A, Protein phosphatase 1alpha at 96A, [RH, Score=612, Expect=0.0]} {Celegans: WBGene00001748, gsp-2, Serine/threonine-protein phosphatase PP1-beta, [RH, Score=624, Expect=0.0]} {Smed: dd_Smed_v6_1407_0_1, dd_Smed_v6_1407_0_1, [RH, Score=645, Expect=0.0]} {RNA1509_24147, RNA1509_48211, RNA1509_5572, RNA1509_6169, RNA1509_698} {RNA1310_2800.1, RNA1509_24147, RNA1509_48211, RNA1509_5572, RNA1509_6169, RNA1509_698} {RNA1509_24147, RNA1509_48211, RNA1509_5572, RNA1509_6169, RNA1509_698, RNA815_569.1} |
2. | MligTC455_24983 | 2242 | 46.71 | Mlig455_052928 | Neo: - Age: - |
SPTAN1 | 2.551 | - | - | 0.859 | 0.975 | - | 0.717 | Mlig455_052928 {REF} {Length: 8238} {TRANSSPLICED} {Pfam: Spectrin repeat [PF00435.23, score=596.4]; Ca2+ insensitive EF hand [PF08726.12, score=68.2]; EF hand [PF00036.34, score=44.9]; EF-hand domain [PF13405.8, score=39.0]; EF-hand domain pair [PF13499.8, score=34.3]; EF-hand domain pair [PF13833.8, score=30.4]; EF hand [PF13202.8, score=26.1]} {Human: ENSG00000197694, SPTAN1, spectrin alpha, non-erythrocytic 1, [Score=1296, Expect=0.0]} {Mouse: ENSMUSG00000057738, Sptan1, spectrin alpha, non-erythrocytic 1, [Score=1301, Expect=0.0]} {Dmel: FBgn0250789, alpha-Spec, alpha Spectrin, [Score=1353, Expect=0.0]} {Celegans: WBGene00004951, spc-1, SPeCtrin, [Score=1230, Expect=0.0]} {Smed: dd_Smed_v6_919_0_1, dd_Smed_v6_919_0_1, [Score=1518, Expect=0.0]} {RNA1509_150} {RNA1310_231.1} {RNA815_81} |
3. | MligTC455_34054 | 2761 | 57.51 | Mlig455_000070, Mlig455_063736 | Neo: - Age: - |
EIF4G3 | 2.519 | - | - | - | 0.973 | 0.770 | 0.776 | Mlig455_000070 {REF} {Length: 5242} {TRANSSPLICED} {Pfam: MIF4G domain [PF02854.21, score=107.1]; MA3 domain [PF02847.19, score=25.3]} {Human: ENSG00000075151, EIF4G3, eukaryotic translation initiation factor 4 gamma 3, [RH, Score=325, Expect=5e-90]} {Mouse: ENSMUSG00000028760, Eif4g3, eukaryotic translation initiation factor 4 gamma, 3, [RH, Score=339, Expect=4e-95]} {Dmel: FBgn0010488, NAT1, [Score=153, Expect=5e-37]} {Smed: dd_Smed_v6_3720_0_1, dd_Smed_v6_3720_0_1, [RH, Score=224, Expect=1e-59]} {RNA1509_35483} {RNA1310_1386.1} {RNA815_242.1} Mlig455_063736 {REF} {Length: 5197} {TRANSSPLICED} {Pfam: MIF4G domain [PF02854.21, score=107.1]; MA3 domain [PF02847.19, score=25.3]} {Human: ENSG00000075151, EIF4G3, eukaryotic translation initiation factor 4 gamma 3, [RH, Score=322, Expect=3e-89]} {Mouse: ENSMUSG00000028760, Eif4g3, eukaryotic translation initiation factor 4 gamma, 3, [RH, Score=340, Expect=2e-95]} {Dmel: FBgn0010488, NAT1, [Score=153, Expect=6e-37]} {Smed: dd_Smed_v6_3720_0_1, dd_Smed_v6_3720_0_1, [RH, Score=224, Expect=1e-59]} {RNA1509_35483} {RNA1310_1386.1} {RNA815_242.1} |
4. | MligTC455_46927 | 2817 | 58.68 | Mlig455_020646 | Neo: - Age: - |
CLPTM1 | 1.754 | - | - | - | 0.951 | - | 0.803 | Mlig455_020646 {REF} {Length: 2391} {TRANSSPLICED} {Pfam: Cleft lip and palate transmembrane protein 1 (CLPTM1) [PF05602.14, score=481.6]; Protein of unknown function (DUF1761) [PF08570.12, score=21.1]} {Human: ENSG00000104853, CLPTM1, CLPTM1, transmembrane protein, [RH, Score=748, Expect=0.0]} {Mouse: ENSMUSG00000002981, Clptm1, cleft lip and palate associated transmembrane protein 1, [RH, Score=740, Expect=0.0]} {Dmel: FBgn0031590, CG3702, [RH, Score=659, Expect=0.0]} {Celegans: WBGene00016469, C36B7.6, [RH, Score=596, Expect=0.0]} {Smed: dd_Smed_v6_2152_0_1, dd_Smed_v6_2152_0_1, [RH, Score=764, Expect=0.0]} {RNA1509_2789, RNA1509_28589} {RNA1310_9020, RNA1509_28589} {RNA1509_28589, RNA815_2968} |
5. | MligTC455_36860 | 3258 | 67.88 | Mlig455_053589 | Neo: Int S/G2/M Age: - Regeneration-upregulated BL: 1.276 Regeneration-enriched BL: 1.276 |
CCT4 | 1.664 | - | - | - | 0.956 | - | 0.708 | Mlig455_053589 {REF} {Length: 2798} {Pfam: TCP-1/cpn60 chaperonin family [PF00118.26, score=518.2]} {Human: ENSG00000115484, CCT4, chaperonin containing TCP1 subunit 4, [RH, Score=731, Expect=0.0]} {Mouse: ENSMUSG00000007739, Cct4, chaperonin containing Tcp1, subunit 4 (delta), [RH, Score=738, Expect=0.0]} {Dmel: FBgn0032444, CCT4, Chaperonin containing TCP1 subunit 4, [RH, Score=719, Expect=0.0]} {Celegans: WBGene00000379, cct-4, T-complex protein 1 subunit delta, [RH, Score=680, Expect=0.0]} {Smed: dd_Smed_v6_773_0_1, dd_Smed_v6_773_0_1, [RH, Score=691, Expect=0.0]} {RNA1509_59217} {RNA1310_8306} {RNA815_3268.1} |
6. | MligTC455_30629 | 803 | 16.73 | Mlig455_066612 | Neo: - Age: - Region-enriched R5: 1.551/0.02318 |
GALK1 | 1.663 | - | - | - | 0.955 | - | 0.708 | Mlig455_066612 {REF} {Length: 1768} {TRANSSPLICED} {Pfam: Galactokinase galactose-binding signature [PF10509.11, score=75.3]; GHMP kinases C terminal [PF08544.15, score=50.8]; GHMP kinases N terminal domain [PF00288.28, score=47.2]} {Human: ENSG00000108479, GALK1, galactokinase 1, [RH, Score=367, Expect=1e-124]} {Mouse: ENSMUSG00000020766, Galk1, galactokinase 1, [RH, Score=365, Expect=4e-124]} {Dmel: FBgn0263199, Galk, Galactokinase, [Score=81.6, Expect=2e-16]} {Celegans: WBGene00006461, tag-96, [Score=101, Expect=3e-23]} {Smed: dd_Smed_v6_5394_0_1, dd_Smed_v6_5394_0_1, [RH, Score=335, Expect=1e-112]} {RNA1509_16527, RNA1509_24089, RNA1509_48275} {RNA1310_15048, RNA1509_16527, RNA1509_24089, RNA1509_48275} {RNA1509_16527, RNA1509_24089, RNA1509_48275, RNA815_9890} |
7. | MligTC455_04366 | 654 | 13.63 | Mlig455_052829 | Neo: - Age: - |
UPF2 | 0.97 | - | - | - | 0.970 | - | - | Mlig455_052829 {REF} {Length: 4197} {TRANSSPLICED} {Pfam: MIF4G domain [PF02854.21, score=172.7]; Up-frameshift suppressor 2 [PF04050.16, score=29.1]} {Human: ENSG00000151461, UPF2, UPF2, regulator of nonsense mediated mRNA decay, [Score=651, Expect=0.0]} {Mouse: ENSMUSG00000043241, Upf2, UPF2 regulator of nonsense transcripts homolog (yeast), [Score=659, Expect=0.0]} {Dmel: FBgn0029992, Upf2, [Score=569, Expect=0.0]} {Celegans: WBGene00004881, smg-3, SMG-3; Suppressor with Morphological effect on Genitalia, [RH, Score=328, Expect=5e-94]} {Smed: dd_Smed_v6_7696_0_1, dd_Smed_v6_7696_0_1, [RH, Score=541, Expect=3e-172]} {RNA1509_10414} {RNA1310_2087} {RNA815_4700.1} |
8. | MligTC455_24982 | 6454 | 134.47 | Mlig455_036775, Mlig455_036784 | Neo: - Age: - Regeneration-upregulated BL: 1.368 Regeneration-enriched BL: 1.368 |
SPTAN1 | 0.963 | - | - | - | 0.963 | - | - | Mlig455_036775 {REF} {Length: 8328} {TRANSSPLICED} {Pfam: Spectrin repeat [PF00435.23, score=1171.7]; Ca2+ insensitive EF hand [PF08726.12, score=69.2]; EF hand [PF00036.34, score=43.5]; EF-hand domain pair [PF13499.8, score=36.8]; EF-hand domain [PF13405.8, score=36.6]; EF-hand domain pair [PF13833.8, score=28.8]; EF hand [PF13202.8, score=26.1]} {Human: ENSG00000197694, SPTAN1, spectrin alpha, non-erythrocytic 1, [RH, Score=2292, Expect=0.0]} {Mouse: ENSMUSG00000057738, Sptan1, spectrin alpha, non-erythrocytic 1, [RH, Score=2303, Expect=0.0]} {Dmel: FBgn0250789, alpha-Spec, alpha Spectrin, [RH, Score=2400, Expect=0.0]} {Celegans: WBGene00004951, spc-1, SPeCtrin, [RH, Score=2167, Expect=0.0]} {Smed: dd_Smed_v6_919_0_1, dd_Smed_v6_919_0_1, [RH, Score=2591, Expect=0.0]} {RNA1509_150, RNA1509_6095} {RNA1310_231.1, RNA1509_150, RNA1509_6095} {RNA1509_150, RNA1509_6095, RNA815_81} Mlig455_036784 {REF} {Length: 8323} {TRANSSPLICED} {Pfam: Spectrin repeat [PF00435.23, score=1170.9]; Ca2+ insensitive EF hand [PF08726.12, score=69.2]; EF hand [PF00036.34, score=43.5]; EF-hand domain pair [PF13499.8, score=37.0]; EF-hand domain [PF13405.8, score=36.6]; EF-hand domain pair [PF13833.8, score=28.8]; EF hand [PF13202.8, score=26.1]} {Human: ENSG00000197694, SPTAN1, spectrin alpha, non-erythrocytic 1, [RH, Score=2293, Expect=0.0]} {Mouse: ENSMUSG00000057738, Sptan1, spectrin alpha, non-erythrocytic 1, [RH, Score=2303, Expect=0.0]} {Dmel: FBgn0250789, alpha-Spec, alpha Spectrin, [RH, Score=2402, Expect=0.0]} {Celegans: WBGene00004951, spc-1, SPeCtrin, [RH, Score=2170, Expect=0.0]} {Smed: dd_Smed_v6_919_0_1, dd_Smed_v6_919_0_1, [RH, Score=2593, Expect=0.0]} {RNA1509_150} {RNA1310_231.1} {RNA815_81} |
9. | MligTC455_22515 | 5168 | 107.66 | Mlig455_001400 | Neo: - Age: - |
CSNK2B | 0.962 | - | - | - | 0.962 | - | - | Mlig455_001400 {REF} {Length: 1280} {TRANSSPLICED} {Pfam: Casein kinase II regulatory subunit [PF01214.20, score=280.4]} {Human: ENSG00000204435, CSNK2B, casein kinase 2 beta, [RH, Score=403, Expect=2e-144]; ENSG00000224774, CSNK2B, casein kinase 2 beta, [RH, Score=403, Expect=2e-144]; ENSG00000206406, CSNK2B, casein kinase 2 beta, [RH, Score=403, Expect=2e-144]; ENSG00000230700, CSNK2B, casein kinase 2 beta, [RH, Score=403, Expect=2e-144]; ENSG00000232960, CSNK2B, casein kinase 2 beta, [RH, Score=403, Expect=2e-144]; ENSG00000224398, CSNK2B, casein kinase 2 beta, [RH, Score=403, Expect=2e-144]; ENSG00000228875, CSNK2B, casein kinase 2 beta, [RH, Score=403, Expect=2e-144]} {Mouse: ENSMUSG00000024387, Csnk2b, casein kinase 2, beta polypeptide, [RH, Score=401, Expect=5e-144]} {Dmel: FBgn0000259, CkIIbeta, Casein kinase II beta subunit, [RH, Score=385, Expect=1e-137]} {Celegans: WBGene00002196, kin-10, Casein kinase II subunit beta, [RH, Score=351, Expect=3e-124]} {Smed: dd_Smed_v6_1428_0_1, dd_Smed_v6_1428_0_1, [RH, Score=391, Expect=3e-140]} {RNA1509_1868} {RNA1310_26906, RNA1509_1868} {RNA1509_1868, RNA815_11543} |
10. | MligTC455_42553 | 3321 | 69.18 | Mlig455_008710 | Neo: Irradiation Age: - Region-enriched R5: 2.253/0.00001 |
0.962 | - | - | - | 0.962 | - | - | Mlig455_008710 {REF} {Length: 3342} {Pfam: DDHD domain [PF02862.19, score=22.7]} {RNA1509_1273} {RNA1310_5765} {RNA815_4334.1} | |
11. | MligTC455_24878 | 969 | 20.2 | Mlig455_045252 | Neo: - Age: logFC(26M/2M)=1.306 Region-enriched R5: 1.363/0.04356 |
LIMS2 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_045252 {REF} {Length: 1439} {TRANSSPLICED} {Pfam: LIM domain [PF00412.24, score=76.2]} {Human: ENSG00000072163, LIMS2, LIM zinc finger domain containing 2, [Score=92.0, Expect=3e-21]; ENSG00000256671, LIMS4, LIM zinc finger domain containing 4, [Score=87.8, Expect=1e-19]; ENSG00000256977, LIMS3, LIM zinc finger domain containing 3, [Score=87.8, Expect=1e-19]} {Mouse: ENSMUSG00000024395, Lims2, LIM and senescent cell antigen like domains 2, [Score=88.6, Expect=3e-20]; ENSMUSG00000019920, Lims1, LIM and senescent cell antigen-like domains 1, [Score=88.2, Expect=6e-20]} {Dmel: FBgn0020249, stck, steamer duck, [Score=101, Expect=4e-25]} {Celegans: WBGene00006826, unc-97, LIM domain-containing protein unc-97, [Score=107, Expect=2e-27]} {Smed: dd_Smed_v6_2476_0_1, dd_Smed_v6_2476_0_1, [Score=108, Expect=4e-28]} {RNA1509_24514} {RNA1310_13269.1} {RNA815_4936.1} |