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Results for MligTC455_28566

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_28566 9187 191.39 Mlig455_064915, Mlig455_066841

Neo: -

Age: -

PPP1CA

Mlig455_064915 {REF} {Length: 2044} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=141.6]; Serine-threonine protein phosphatase N-terminal domain [PF16891.7, score=81.0]} {Human: ENSG00000172531, PPP1CA, protein phosphatase 1 catalytic subunit alpha, [RH, Score=629, Expect=0.0]; ENSG00000186298, PPP1CC, protein phosphatase 1 catalytic subunit gamma, [RH, Score=620, Expect=0.0]; ENSG00000213639, PPP1CB, protein phosphatase 1 catalytic subunit beta, [RH, Score=603, Expect=0.0]} {Mouse: ENSMUSG00000096994, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [RH, Score=628, Expect=0.0]; ENSMUSG00000040385, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [RH, Score=628, Expect=0.0]; ENSMUSG00000004455, Ppp1cc, protein phosphatase 1 catalytic subunit gamma, [RH, Score=620, Expect=0.0]; ENSMUSG00000014956, Ppp1cb, protein phosphatase 1 catalytic subunit beta, [RH, Score=603, Expect=0.0]} {Dmel: FBgn0003134, Pp1alpha-96A, Protein phosphatase 1alpha at 96A, [RH, Score=612, Expect=0.0]} {Celegans: WBGene00001748, gsp-2, Serine/threonine-protein phosphatase PP1-beta, [RH, Score=624, Expect=0.0]} {Smed: dd_Smed_v6_1407_0_1, dd_Smed_v6_1407_0_1, [RH, Score=645, Expect=0.0]} {RNA1509_5157, RNA1509_698, RNA1509_9320} {RNA1310_2800.1, RNA1509_5157, RNA1509_9320} {RNA1509_5157, RNA1509_9320, RNA815_569.1}

Mlig455_066841 {REF} {Length: 2077} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=141.6]; Serine-threonine protein phosphatase N-terminal domain [PF16891.7, score=81.0]} {Human: ENSG00000172531, PPP1CA, protein phosphatase 1 catalytic subunit alpha, [RH, Score=629, Expect=0.0]; ENSG00000186298, PPP1CC, protein phosphatase 1 catalytic subunit gamma, [RH, Score=620, Expect=0.0]; ENSG00000213639, PPP1CB, protein phosphatase 1 catalytic subunit beta, [RH, Score=603, Expect=0.0]} {Mouse: ENSMUSG00000096994, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [RH, Score=628, Expect=0.0]; ENSMUSG00000040385, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [RH, Score=628, Expect=0.0]; ENSMUSG00000004455, Ppp1cc, protein phosphatase 1 catalytic subunit gamma, [RH, Score=620, Expect=0.0]; ENSMUSG00000014956, Ppp1cb, protein phosphatase 1 catalytic subunit beta, [RH, Score=603, Expect=0.0]} {Dmel: FBgn0003134, Pp1alpha-96A, Protein phosphatase 1alpha at 96A, [RH, Score=612, Expect=0.0]} {Celegans: WBGene00001748, gsp-2, Serine/threonine-protein phosphatase PP1-beta, [RH, Score=624, Expect=0.0]} {Smed: dd_Smed_v6_1407_0_1, dd_Smed_v6_1407_0_1, [RH, Score=645, Expect=0.0]} {RNA1509_24147, RNA1509_48211, RNA1509_5572, RNA1509_6169, RNA1509_698} {RNA1310_2800.1, RNA1509_24147, RNA1509_48211, RNA1509_5572, RNA1509_6169, RNA1509_698} {RNA1509_24147, RNA1509_48211, RNA1509_5572, RNA1509_6169, RNA1509_698, RNA815_569.1}

Cumulative graph for MligTC455_28566

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.113 7.714 0.76855 1.00000
RegionR2 -0.032 7.714 0.89706 1.00000
RegionR3 0.086 7.714 0.67871 1.00000
RegionR4 0.829 7.714 0.00034 0.00439
RegionR5 -0.012 7.714 0.95211 1.00000
RegionR6 -0.015 7.714 0.94170 1.00000
RegionR7 -0.578 7.714 0.01179 0.18972
RegionR8 -0.165 7.714 0.51635 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.487 7.714 0.01589 0.53148
RegenerationR2 0.05 7.714 0.84050 1.00000
RegenerationR3 -0.003 7.714 0.98996 1.00000
RegenerationR4 -0.46 7.714 0.08484 0.46010
RegenerationR5 0.002 7.714 0.99477 1.00000
RegenerationR6 0.167 7.714 0.52244 0.82215
RegenerationBL 0.535 7.714 0.02364 0.16887
RegenerationTP 0.064 7.714 0.81403 1.00000


Genes with expression patterns similar to MligTC455_28566

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_28566 9187 191.39 Mlig455_064915, Mlig455_066841

Neo: -

Age: -

PPP1CA 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_064915 {REF} {Length: 2044} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=141.6]; Serine-threonine protein phosphatase N-terminal domain [PF16891.7, score=81.0]} {Human: ENSG00000172531, PPP1CA, protein phosphatase 1 catalytic subunit alpha, [RH, Score=629, Expect=0.0]; ENSG00000186298, PPP1CC, protein phosphatase 1 catalytic subunit gamma, [RH, Score=620, Expect=0.0]; ENSG00000213639, PPP1CB, protein phosphatase 1 catalytic subunit beta, [RH, Score=603, Expect=0.0]} {Mouse: ENSMUSG00000096994, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [RH, Score=628, Expect=0.0]; ENSMUSG00000040385, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [RH, Score=628, Expect=0.0]; ENSMUSG00000004455, Ppp1cc, protein phosphatase 1 catalytic subunit gamma, [RH, Score=620, Expect=0.0]; ENSMUSG00000014956, Ppp1cb, protein phosphatase 1 catalytic subunit beta, [RH, Score=603, Expect=0.0]} {Dmel: FBgn0003134, Pp1alpha-96A, Protein phosphatase 1alpha at 96A, [RH, Score=612, Expect=0.0]} {Celegans: WBGene00001748, gsp-2, Serine/threonine-protein phosphatase PP1-beta, [RH, Score=624, Expect=0.0]} {Smed: dd_Smed_v6_1407_0_1, dd_Smed_v6_1407_0_1, [RH, Score=645, Expect=0.0]} {RNA1509_5157, RNA1509_698, RNA1509_9320} {RNA1310_2800.1, RNA1509_5157, RNA1509_9320} {RNA1509_5157, RNA1509_9320, RNA815_569.1}

Mlig455_066841 {REF} {Length: 2077} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=141.6]; Serine-threonine protein phosphatase N-terminal domain [PF16891.7, score=81.0]} {Human: ENSG00000172531, PPP1CA, protein phosphatase 1 catalytic subunit alpha, [RH, Score=629, Expect=0.0]; ENSG00000186298, PPP1CC, protein phosphatase 1 catalytic subunit gamma, [RH, Score=620, Expect=0.0]; ENSG00000213639, PPP1CB, protein phosphatase 1 catalytic subunit beta, [RH, Score=603, Expect=0.0]} {Mouse: ENSMUSG00000096994, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [RH, Score=628, Expect=0.0]; ENSMUSG00000040385, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [RH, Score=628, Expect=0.0]; ENSMUSG00000004455, Ppp1cc, protein phosphatase 1 catalytic subunit gamma, [RH, Score=620, Expect=0.0]; ENSMUSG00000014956, Ppp1cb, protein phosphatase 1 catalytic subunit beta, [RH, Score=603, Expect=0.0]} {Dmel: FBgn0003134, Pp1alpha-96A, Protein phosphatase 1alpha at 96A, [RH, Score=612, Expect=0.0]} {Celegans: WBGene00001748, gsp-2, Serine/threonine-protein phosphatase PP1-beta, [RH, Score=624, Expect=0.0]} {Smed: dd_Smed_v6_1407_0_1, dd_Smed_v6_1407_0_1, [RH, Score=645, Expect=0.0]} {RNA1509_24147, RNA1509_48211, RNA1509_5572, RNA1509_6169, RNA1509_698} {RNA1310_2800.1, RNA1509_24147, RNA1509_48211, RNA1509_5572, RNA1509_6169, RNA1509_698} {RNA1509_24147, RNA1509_48211, RNA1509_5572, RNA1509_6169, RNA1509_698, RNA815_569.1}
2. MligTC455_24983 2242 46.71 Mlig455_052928

Neo: -

Age: -

SPTAN1 2.551 - - 0.859 0.975 - 0.717 Mlig455_052928 {REF} {Length: 8238} {TRANSSPLICED} {Pfam: Spectrin repeat [PF00435.23, score=596.4]; Ca2+ insensitive EF hand [PF08726.12, score=68.2]; EF hand [PF00036.34, score=44.9]; EF-hand domain [PF13405.8, score=39.0]; EF-hand domain pair [PF13499.8, score=34.3]; EF-hand domain pair [PF13833.8, score=30.4]; EF hand [PF13202.8, score=26.1]} {Human: ENSG00000197694, SPTAN1, spectrin alpha, non-erythrocytic 1, [Score=1296, Expect=0.0]} {Mouse: ENSMUSG00000057738, Sptan1, spectrin alpha, non-erythrocytic 1, [Score=1301, Expect=0.0]} {Dmel: FBgn0250789, alpha-Spec, alpha Spectrin, [Score=1353, Expect=0.0]} {Celegans: WBGene00004951, spc-1, SPeCtrin, [Score=1230, Expect=0.0]} {Smed: dd_Smed_v6_919_0_1, dd_Smed_v6_919_0_1, [Score=1518, Expect=0.0]} {RNA1509_150} {RNA1310_231.1} {RNA815_81}
3. MligTC455_34054 2761 57.51 Mlig455_000070, Mlig455_063736

Neo: -

Age: -

EIF4G3 2.519 - - - 0.973 0.770 0.776

Mlig455_000070 {REF} {Length: 5242} {TRANSSPLICED} {Pfam: MIF4G domain [PF02854.21, score=107.1]; MA3 domain [PF02847.19, score=25.3]} {Human: ENSG00000075151, EIF4G3, eukaryotic translation initiation factor 4 gamma 3, [RH, Score=325, Expect=5e-90]} {Mouse: ENSMUSG00000028760, Eif4g3, eukaryotic translation initiation factor 4 gamma, 3, [RH, Score=339, Expect=4e-95]} {Dmel: FBgn0010488, NAT1, [Score=153, Expect=5e-37]} {Smed: dd_Smed_v6_3720_0_1, dd_Smed_v6_3720_0_1, [RH, Score=224, Expect=1e-59]} {RNA1509_35483} {RNA1310_1386.1} {RNA815_242.1}

Mlig455_063736 {REF} {Length: 5197} {TRANSSPLICED} {Pfam: MIF4G domain [PF02854.21, score=107.1]; MA3 domain [PF02847.19, score=25.3]} {Human: ENSG00000075151, EIF4G3, eukaryotic translation initiation factor 4 gamma 3, [RH, Score=322, Expect=3e-89]} {Mouse: ENSMUSG00000028760, Eif4g3, eukaryotic translation initiation factor 4 gamma, 3, [RH, Score=340, Expect=2e-95]} {Dmel: FBgn0010488, NAT1, [Score=153, Expect=6e-37]} {Smed: dd_Smed_v6_3720_0_1, dd_Smed_v6_3720_0_1, [RH, Score=224, Expect=1e-59]} {RNA1509_35483} {RNA1310_1386.1} {RNA815_242.1}
4. MligTC455_46927 2817 58.68 Mlig455_020646

Neo: -

Age: -

CLPTM1 1.754 - - - 0.951 - 0.803 Mlig455_020646 {REF} {Length: 2391} {TRANSSPLICED} {Pfam: Cleft lip and palate transmembrane protein 1 (CLPTM1) [PF05602.14, score=481.6]; Protein of unknown function (DUF1761) [PF08570.12, score=21.1]} {Human: ENSG00000104853, CLPTM1, CLPTM1, transmembrane protein, [RH, Score=748, Expect=0.0]} {Mouse: ENSMUSG00000002981, Clptm1, cleft lip and palate associated transmembrane protein 1, [RH, Score=740, Expect=0.0]} {Dmel: FBgn0031590, CG3702, [RH, Score=659, Expect=0.0]} {Celegans: WBGene00016469, C36B7.6, [RH, Score=596, Expect=0.0]} {Smed: dd_Smed_v6_2152_0_1, dd_Smed_v6_2152_0_1, [RH, Score=764, Expect=0.0]} {RNA1509_2789, RNA1509_28589} {RNA1310_9020, RNA1509_28589} {RNA1509_28589, RNA815_2968}
5. MligTC455_36860 3258 67.88 Mlig455_053589

Neo: Int S/G2/M

Age: -

Regeneration-upregulated BL: 1.276

Regeneration-enriched BL: 1.276

CCT4 1.664 - - - 0.956 - 0.708 Mlig455_053589 {REF} {Length: 2798} {Pfam: TCP-1/cpn60 chaperonin family [PF00118.26, score=518.2]} {Human: ENSG00000115484, CCT4, chaperonin containing TCP1 subunit 4, [RH, Score=731, Expect=0.0]} {Mouse: ENSMUSG00000007739, Cct4, chaperonin containing Tcp1, subunit 4 (delta), [RH, Score=738, Expect=0.0]} {Dmel: FBgn0032444, CCT4, Chaperonin containing TCP1 subunit 4, [RH, Score=719, Expect=0.0]} {Celegans: WBGene00000379, cct-4, T-complex protein 1 subunit delta, [RH, Score=680, Expect=0.0]} {Smed: dd_Smed_v6_773_0_1, dd_Smed_v6_773_0_1, [RH, Score=691, Expect=0.0]} {RNA1509_59217} {RNA1310_8306} {RNA815_3268.1}
6. MligTC455_30629 803 16.73 Mlig455_066612

Neo: -

Age: -

Region-enriched R5: 1.551/0.02318

GALK1 1.663 - - - 0.955 - 0.708 Mlig455_066612 {REF} {Length: 1768} {TRANSSPLICED} {Pfam: Galactokinase galactose-binding signature [PF10509.11, score=75.3]; GHMP kinases C terminal [PF08544.15, score=50.8]; GHMP kinases N terminal domain [PF00288.28, score=47.2]} {Human: ENSG00000108479, GALK1, galactokinase 1, [RH, Score=367, Expect=1e-124]} {Mouse: ENSMUSG00000020766, Galk1, galactokinase 1, [RH, Score=365, Expect=4e-124]} {Dmel: FBgn0263199, Galk, Galactokinase, [Score=81.6, Expect=2e-16]} {Celegans: WBGene00006461, tag-96, [Score=101, Expect=3e-23]} {Smed: dd_Smed_v6_5394_0_1, dd_Smed_v6_5394_0_1, [RH, Score=335, Expect=1e-112]} {RNA1509_16527, RNA1509_24089, RNA1509_48275} {RNA1310_15048, RNA1509_16527, RNA1509_24089, RNA1509_48275} {RNA1509_16527, RNA1509_24089, RNA1509_48275, RNA815_9890}
7. MligTC455_04366 654 13.63 Mlig455_052829

Neo: -

Age: -

UPF2 0.97 - - - 0.970 - - Mlig455_052829 {REF} {Length: 4197} {TRANSSPLICED} {Pfam: MIF4G domain [PF02854.21, score=172.7]; Up-frameshift suppressor 2 [PF04050.16, score=29.1]} {Human: ENSG00000151461, UPF2, UPF2, regulator of nonsense mediated mRNA decay, [Score=651, Expect=0.0]} {Mouse: ENSMUSG00000043241, Upf2, UPF2 regulator of nonsense transcripts homolog (yeast), [Score=659, Expect=0.0]} {Dmel: FBgn0029992, Upf2, [Score=569, Expect=0.0]} {Celegans: WBGene00004881, smg-3, SMG-3; Suppressor with Morphological effect on Genitalia, [RH, Score=328, Expect=5e-94]} {Smed: dd_Smed_v6_7696_0_1, dd_Smed_v6_7696_0_1, [RH, Score=541, Expect=3e-172]} {RNA1509_10414} {RNA1310_2087} {RNA815_4700.1}
8. MligTC455_24982 6454 134.47 Mlig455_036775, Mlig455_036784

Neo: -

Age: -

Regeneration-upregulated BL: 1.368

Regeneration-enriched BL: 1.368

SPTAN1 0.963 - - - 0.963 - -

Mlig455_036775 {REF} {Length: 8328} {TRANSSPLICED} {Pfam: Spectrin repeat [PF00435.23, score=1171.7]; Ca2+ insensitive EF hand [PF08726.12, score=69.2]; EF hand [PF00036.34, score=43.5]; EF-hand domain pair [PF13499.8, score=36.8]; EF-hand domain [PF13405.8, score=36.6]; EF-hand domain pair [PF13833.8, score=28.8]; EF hand [PF13202.8, score=26.1]} {Human: ENSG00000197694, SPTAN1, spectrin alpha, non-erythrocytic 1, [RH, Score=2292, Expect=0.0]} {Mouse: ENSMUSG00000057738, Sptan1, spectrin alpha, non-erythrocytic 1, [RH, Score=2303, Expect=0.0]} {Dmel: FBgn0250789, alpha-Spec, alpha Spectrin, [RH, Score=2400, Expect=0.0]} {Celegans: WBGene00004951, spc-1, SPeCtrin, [RH, Score=2167, Expect=0.0]} {Smed: dd_Smed_v6_919_0_1, dd_Smed_v6_919_0_1, [RH, Score=2591, Expect=0.0]} {RNA1509_150, RNA1509_6095} {RNA1310_231.1, RNA1509_150, RNA1509_6095} {RNA1509_150, RNA1509_6095, RNA815_81}

Mlig455_036784 {REF} {Length: 8323} {TRANSSPLICED} {Pfam: Spectrin repeat [PF00435.23, score=1170.9]; Ca2+ insensitive EF hand [PF08726.12, score=69.2]; EF hand [PF00036.34, score=43.5]; EF-hand domain pair [PF13499.8, score=37.0]; EF-hand domain [PF13405.8, score=36.6]; EF-hand domain pair [PF13833.8, score=28.8]; EF hand [PF13202.8, score=26.1]} {Human: ENSG00000197694, SPTAN1, spectrin alpha, non-erythrocytic 1, [RH, Score=2293, Expect=0.0]} {Mouse: ENSMUSG00000057738, Sptan1, spectrin alpha, non-erythrocytic 1, [RH, Score=2303, Expect=0.0]} {Dmel: FBgn0250789, alpha-Spec, alpha Spectrin, [RH, Score=2402, Expect=0.0]} {Celegans: WBGene00004951, spc-1, SPeCtrin, [RH, Score=2170, Expect=0.0]} {Smed: dd_Smed_v6_919_0_1, dd_Smed_v6_919_0_1, [RH, Score=2593, Expect=0.0]} {RNA1509_150} {RNA1310_231.1} {RNA815_81}
9. MligTC455_22515 5168 107.66 Mlig455_001400

Neo: -

Age: -

CSNK2B 0.962 - - - 0.962 - - Mlig455_001400 {REF} {Length: 1280} {TRANSSPLICED} {Pfam: Casein kinase II regulatory subunit [PF01214.20, score=280.4]} {Human: ENSG00000204435, CSNK2B, casein kinase 2 beta, [RH, Score=403, Expect=2e-144]; ENSG00000224774, CSNK2B, casein kinase 2 beta, [RH, Score=403, Expect=2e-144]; ENSG00000206406, CSNK2B, casein kinase 2 beta, [RH, Score=403, Expect=2e-144]; ENSG00000230700, CSNK2B, casein kinase 2 beta, [RH, Score=403, Expect=2e-144]; ENSG00000232960, CSNK2B, casein kinase 2 beta, [RH, Score=403, Expect=2e-144]; ENSG00000224398, CSNK2B, casein kinase 2 beta, [RH, Score=403, Expect=2e-144]; ENSG00000228875, CSNK2B, casein kinase 2 beta, [RH, Score=403, Expect=2e-144]} {Mouse: ENSMUSG00000024387, Csnk2b, casein kinase 2, beta polypeptide, [RH, Score=401, Expect=5e-144]} {Dmel: FBgn0000259, CkIIbeta, Casein kinase II beta subunit, [RH, Score=385, Expect=1e-137]} {Celegans: WBGene00002196, kin-10, Casein kinase II subunit beta, [RH, Score=351, Expect=3e-124]} {Smed: dd_Smed_v6_1428_0_1, dd_Smed_v6_1428_0_1, [RH, Score=391, Expect=3e-140]} {RNA1509_1868} {RNA1310_26906, RNA1509_1868} {RNA1509_1868, RNA815_11543}
10. MligTC455_42553 3321 69.18 Mlig455_008710

Neo: Irradiation

Age: -

Region-enriched R5: 2.253/0.00001

0.962 - - - 0.962 - - Mlig455_008710 {REF} {Length: 3342} {Pfam: DDHD domain [PF02862.19, score=22.7]} {RNA1509_1273} {RNA1310_5765} {RNA815_4334.1}
11. MligTC455_24878 969 20.2 Mlig455_045252

Neo: -

Age: logFC(26M/2M)=1.306

Region-enriched R5: 1.363/0.04356

LIMS2 0.951 - - - 0.951 - - Mlig455_045252 {REF} {Length: 1439} {TRANSSPLICED} {Pfam: LIM domain [PF00412.24, score=76.2]} {Human: ENSG00000072163, LIMS2, LIM zinc finger domain containing 2, [Score=92.0, Expect=3e-21]; ENSG00000256671, LIMS4, LIM zinc finger domain containing 4, [Score=87.8, Expect=1e-19]; ENSG00000256977, LIMS3, LIM zinc finger domain containing 3, [Score=87.8, Expect=1e-19]} {Mouse: ENSMUSG00000024395, Lims2, LIM and senescent cell antigen like domains 2, [Score=88.6, Expect=3e-20]; ENSMUSG00000019920, Lims1, LIM and senescent cell antigen-like domains 1, [Score=88.2, Expect=6e-20]} {Dmel: FBgn0020249, stck, steamer duck, [Score=101, Expect=4e-25]} {Celegans: WBGene00006826, unc-97, LIM domain-containing protein unc-97, [Score=107, Expect=2e-27]} {Smed: dd_Smed_v6_2476_0_1, dd_Smed_v6_2476_0_1, [Score=108, Expect=4e-28]} {RNA1509_24514} {RNA1310_13269.1} {RNA815_4936.1}

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