TomoSeq data search

Data search

Results for MligTC455_28591

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_28591	321	6.69	Mlig455_013066	Neo: - Age: -	MAP2K5	Mlig455_013066 {REF} {Length: 1646} {Pfam: Protein kinase domain [PF00069.27, score=163.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=112.0]; Kinase-like [PF14531.8, score=25.0]} {Human: ENSG00000137764, MAP2K5, mitogen-activated protein kinase kinase 5, [Score=156, Expect=2e-42]} {Mouse: ENSMUSG00000058444, Map2k5, mitogen-activated protein kinase kinase 5, [Score=154, Expect=3e-41]} {Dmel: FBgn0010269, Dsor1, Downstream of raf1, [Score=127, Expect=6e-32]} {Celegans: WBGene00003368, mkk-4, MAP kinase kinase mkk-4, [Score=122, Expect=9e-31]} {Smed: dd_Smed_v6_3518_0_1, dd_Smed_v6_3518_0_1, [Score=135, Expect=5e-35]} {RNA1509_42653} {RNA1310_11867.2} {RNA815_3131.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_28591

321

6.69

Mlig455_013066

Neo: -

Age: -

MAP2K5

Mlig455_013066 {REF} {Length: 1646} {Pfam: Protein kinase domain [PF00069.27, score=163.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=112.0]; Kinase-like [PF14531.8, score=25.0]} {Human: ENSG00000137764, MAP2K5, mitogen-activated protein kinase kinase 5, [Score=156, Expect=2e-42]} {Mouse: ENSMUSG00000058444, Map2k5, mitogen-activated protein kinase kinase 5, [Score=154, Expect=3e-41]} {Dmel: FBgn0010269, Dsor1, Downstream of raf1, [Score=127, Expect=6e-32]} {Celegans: WBGene00003368, mkk-4, MAP kinase kinase mkk-4, [Score=122, Expect=9e-31]} {Smed: dd_Smed_v6_3518_0_1, dd_Smed_v6_3518_0_1, [Score=135, Expect=5e-35]} {RNA1509_42653} {RNA1310_11867.2} {RNA815_3131.1}

Cumulative graph for MligTC455_28591

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-5.035	3.148	1.00000	1.00000
RegionR2	2.31	3.148	0.01664	0.13699
RegionR3	1.815	3.148	0.04884	0.38620
RegionR4	1.363	3.148	0.16389	0.42366
RegionR5	0.989	3.148	0.31957	0.66095
RegionR6	0.241	3.148	0.67382	1.00000
RegionR7	2.602	3.148	0.01112	0.18380
RegionR8	-4.286	3.148	0.99985	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	7.127	3.148	0.05770	0.72268
RegenerationR2	-0.263	3.148	0.54916	0.89261
RegenerationR3	-0.104	3.148	0.83669	0.99290
RegenerationR4	-0.004	3.148	0.98618	1.00000
RegenerationR5	0.597	3.148	0.20630	0.63971
RegenerationR6	1.27	3.148	0.03843	0.24462
RegenerationBL	1.791	3.148	0.17013	0.49453
RegenerationTP	3.105	3.148	0.04638	0.35654

Genes with expression patterns similar to MligTC455_28591

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_28591	321	6.69	Mlig455_013066	Neo: - Age: -	MAP2K5	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_013066 {REF} {Length: 1646} {Pfam: Protein kinase domain [PF00069.27, score=163.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=112.0]; Kinase-like [PF14531.8, score=25.0]} {Human: ENSG00000137764, MAP2K5, mitogen-activated protein kinase kinase 5, [Score=156, Expect=2e-42]} {Mouse: ENSMUSG00000058444, Map2k5, mitogen-activated protein kinase kinase 5, [Score=154, Expect=3e-41]} {Dmel: FBgn0010269, Dsor1, Downstream of raf1, [Score=127, Expect=6e-32]} {Celegans: WBGene00003368, mkk-4, MAP kinase kinase mkk-4, [Score=122, Expect=9e-31]} {Smed: dd_Smed_v6_3518_0_1, dd_Smed_v6_3518_0_1, [Score=135, Expect=5e-35]} {RNA1509_42653} {RNA1310_11867.2} {RNA815_3131.1}
2.	MligTC455_54011	1192	24.83	Mlig455_013254, Mlig455_013323	Neo: - Age: -		1.722	-	-	0.765	-	-	0.957	Mlig455_013254 {REF} {Length: 1988} {RNA1509_20369} {RNA1310_24723} {RNA815_10733.2} Mlig455_013323 {REF} {Length: 1648} {Pfam: Ets-domain [PF00178.24, score=18.9]} {RNA1509_32337} {RNA1310_22877.1, RNA1509_32337} {RNA1509_32337, RNA815_10733.1}
3.	MligTC455_48781	1957	40.77	Mlig455_055226, Mlig455_055279	Neo: - Age: -	COL11A1, MARCO	0.963	-	-	-	-	-	0.963	Mlig455_055226 {REF} {Length: 3723} {Pfam: Collagenase NC10 and Endostatin [PF06482.13, score=87.6]; Collagen triple helix repeat (20 copies) [PF01391.20, score=26.8]} {Human: ENSG00000060718, COL11A1, collagen type XI alpha 1 chain, [Score=57.0, Expect=2e-07]; ENSG00000172752, COL6A5, collagen type VI alpha 5 chain, [Score=54.7, Expect=1e-06]} {Mouse: ENSMUSG00000028339, Col15a1, collagen, type XV, alpha 1, [Score=100, Expect=4e-21]} {Dmel: FBgn0260660, Mp, Multiplexin, [RH, Score=108, Expect=1e-23]} {Celegans: WBGene00003169, mec-5, MEC-5, [Score=64.3, Expect=1e-10]} {Smed: dd_Smed_v6_6811_0_1, dd_Smed_v6_6811_0_1, [RH, Score=87.0, Expect=4e-17]} {RNA1509_23407} {RNA1310_3256} {RNA815_56.1} Mlig455_055279 {REF} {Length: 3829} {Pfam: Collagenase NC10 and Endostatin [PF06482.13, score=87.5]; Collagen triple helix repeat (20 copies) [PF01391.20, score=29.1]} {Human: ENSG00000019169, MARCO, macrophage receptor with collagenous structure, [Score=58.5, Expect=5e-08]; ENSG00000080573, COL5A3, collagen type V alpha 3 chain, [Score=56.6, Expect=3e-07]} {Mouse: ENSMUSG00000028339, Col15a1, collagen, type XV, alpha 1, [Score=99.8, Expect=1e-20]} {Dmel: FBgn0260660, Mp, Multiplexin, [RH, Score=105, Expect=2e-22]} {Celegans: WBGene00003169, mec-5, MEC-5, [Score=67.8, Expect=8e-12]} {Smed: dd_Smed_v6_6811_0_1, dd_Smed_v6_6811_0_1, [RH, Score=92.8, Expect=6e-19]} {RNA1509_23127, RNA1509_23407} {RNA1310_3142.1, RNA1509_23127, RNA1509_23407} {RNA1509_23127, RNA1509_23407, RNA815_56.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_28591

321

6.69

Mlig455_013066

Neo: -

Age: -

MAP2K5

1.000

MligTC455_54011

1192

24.83

Mlig455_013254, Mlig455_013323

Neo: -

Age: -

1.722

0.765

0.957

Mlig455_013254 {REF} {Length: 1988} {RNA1509_20369} {RNA1310_24723} {RNA815_10733.2}

Mlig455_013323 {REF} {Length: 1648} {Pfam: Ets-domain [PF00178.24, score=18.9]} {RNA1509_32337} {RNA1310_22877.1, RNA1509_32337} {RNA1509_32337, RNA815_10733.1}

MligTC455_48781

1957

40.77

Mlig455_055226, Mlig455_055279

Neo: -

Age: -

COL11A1, MARCO

0.963

Mlig455_055226 {REF} {Length: 3723} {Pfam: Collagenase NC10 and Endostatin [PF06482.13, score=87.6]; Collagen triple helix repeat (20 copies) [PF01391.20, score=26.8]} {Human: ENSG00000060718, COL11A1, collagen type XI alpha 1 chain, [Score=57.0, Expect=2e-07]; ENSG00000172752, COL6A5, collagen type VI alpha 5 chain, [Score=54.7, Expect=1e-06]} {Mouse: ENSMUSG00000028339, Col15a1, collagen, type XV, alpha 1, [Score=100, Expect=4e-21]} {Dmel: FBgn0260660, Mp, Multiplexin, [RH, Score=108, Expect=1e-23]} {Celegans: WBGene00003169, mec-5, MEC-5, [Score=64.3, Expect=1e-10]} {Smed: dd_Smed_v6_6811_0_1, dd_Smed_v6_6811_0_1, [RH, Score=87.0, Expect=4e-17]} {RNA1509_23407} {RNA1310_3256} {RNA815_56.1}

Mlig455_055279 {REF} {Length: 3829} {Pfam: Collagenase NC10 and Endostatin [PF06482.13, score=87.5]; Collagen triple helix repeat (20 copies) [PF01391.20, score=29.1]} {Human: ENSG00000019169, MARCO, macrophage receptor with collagenous structure, [Score=58.5, Expect=5e-08]; ENSG00000080573, COL5A3, collagen type V alpha 3 chain, [Score=56.6, Expect=3e-07]} {Mouse: ENSMUSG00000028339, Col15a1, collagen, type XV, alpha 1, [Score=99.8, Expect=1e-20]} {Dmel: FBgn0260660, Mp, Multiplexin, [RH, Score=105, Expect=2e-22]} {Celegans: WBGene00003169, mec-5, MEC-5, [Score=67.8, Expect=8e-12]} {Smed: dd_Smed_v6_6811_0_1, dd_Smed_v6_6811_0_1, [RH, Score=92.8, Expect=6e-19]} {RNA1509_23127, RNA1509_23407} {RNA1310_3142.1, RNA1509_23127, RNA1509_23407} {RNA1509_23127, RNA1509_23407, RNA815_56.1}