TomoSeq data search

Data search

Results for MligTC455_28607

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_28607	12	0.25	Mlig455_017818	Neo: - Age: -		Mlig455_017818 {REF} {Length: 1845} {NoTransDecoderORF} {RNA1310_142338} {RNA815_12221}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_28607

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	2.388	0.744	0.99989	1.00000
RegionR2	1.012	0.744	0.99962	1.00000
RegionR3	-1.342	0.744	0.99980	1.00000
RegionR4	-0.099	0.744	0.99967	1.00000
RegionR5	-2.048	0.744	0.99950	1.00000
RegionR6	-1.151	0.744	0.99975	1.00000
RegionR7	0.689	0.744	0.99989	1.00000
RegionR8	0.551	0.744	0.99993	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.04	0.744	0.99973	1.00000
RegenerationR2	3.727	0.744	0.00118	0.05105
RegenerationR3	4.025	0.744	0.26172	0.69664
RegenerationR4	2.985	0.744	0.43382	0.83288
RegenerationR5	4.998	0.744	0.06422	0.40004
RegenerationR6	4.544	0.744	0.03608	0.23773
RegenerationBL	0.462	0.744	0.99993	1.00000
RegenerationTP	-0.212	0.744	0.99989	1.00000

Genes with expression patterns similar to MligTC455_28607

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_28607	12	0.25	Mlig455_017818	Neo: - Age: -		2	-	-	-	-	1.000	1.000	Mlig455_017818 {REF} {Length: 1845} {NoTransDecoderORF} {RNA1310_142338} {RNA815_12221}
2.	MligTC455_41750	29	0.6	Mlig455_062460	Neo: Int S/G2/M Age: -	SAMD4B	0.977	-	-	-	-	-	0.977	Mlig455_062460 {REF} {Length: 3236} {TRANSSPLICED} {Pfam: SAM domain (Sterile alpha motif) [PF00536.32, score=30.4]} {Human: ENSG00000179134, SAMD4B, sterile alpha motif domain containing 4B, [RH, Score=112, Expect=1e-25]} {Mouse: ENSMUSG00000109336, Samd4b, sterile alpha motif domain containing 4B, [Score=109, Expect=1e-24]} {Dmel: FBgn0016070, smg, smaug, [RH, Score=77.8, Expect=1e-14]} {Celegans: WBGene00022538, ZC190.4, [RH, Score=73.9, Expect=1e-13]} {Smed: dd_Smed_v6_6923_0_1, dd_Smed_v6_6923_0_1, [Score=129, Expect=1e-32]} {RNA1509_54805, RNA1509_58502} {RNA1310_14232, RNA1509_58502} {RNA1509_58502, RNA815_10563}
3.	MligTC455_46882	387	8.07	Mlig455_041695, Mlig455_041771	Neo: - Age: Down-Up-Down Region-enriched R5: 1.613/0.04960 Regeneration-downregulated BL: -6.783 Regeneration-depleted BL: -6.783		0.955	-	-	-	-	0.955	-	Mlig455_041695 {REF} {Length: 1643} {TRANSSPLICED} {RNA1509_54232} {RNA1310_57958, RNA1509_54232} {RNA1509_54232, RNA815_28403} Mlig455_041771 {REF} {Length: 1253} {TRANSSPLICED} {RNA1509_54232} {RNA1310_57958} {RNA815_34368}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_28607

0.25

Mlig455_017818

Neo: -

Age: -

1.000

Mlig455_017818 {REF} {Length: 1845} {NoTransDecoderORF} {RNA1310_142338} {RNA815_12221}

MligTC455_41750

0.6

Mlig455_062460

Neo: Int S/G2/M

Age: -

SAMD4B

0.977

Mlig455_062460 {REF} {Length: 3236} {TRANSSPLICED} {Pfam: SAM domain (Sterile alpha motif) [PF00536.32, score=30.4]} {Human: ENSG00000179134, SAMD4B, sterile alpha motif domain containing 4B, [RH, Score=112, Expect=1e-25]} {Mouse: ENSMUSG00000109336, Samd4b, sterile alpha motif domain containing 4B, [Score=109, Expect=1e-24]} {Dmel: FBgn0016070, smg, smaug, [RH, Score=77.8, Expect=1e-14]} {Celegans: WBGene00022538, ZC190.4, [RH, Score=73.9, Expect=1e-13]} {Smed: dd_Smed_v6_6923_0_1, dd_Smed_v6_6923_0_1, [Score=129, Expect=1e-32]} {RNA1509_54805, RNA1509_58502} {RNA1310_14232, RNA1509_58502} {RNA1509_58502, RNA815_10563}

MligTC455_46882

387

8.07

Mlig455_041695, Mlig455_041771

Neo: -

Age: Down-Up-Down

Region-enriched R5: 1.613/0.04960

Regeneration-downregulated BL: -6.783

Regeneration-depleted BL: -6.783

0.955

Mlig455_041695 {REF} {Length: 1643} {TRANSSPLICED} {RNA1509_54232} {RNA1310_57958, RNA1509_54232} {RNA1509_54232, RNA815_28403}

Mlig455_041771 {REF} {Length: 1253} {TRANSSPLICED} {RNA1509_54232} {RNA1310_57958} {RNA815_34368}