TomoSeq data search

Data search

Results for MligTC455_28611

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_28611

1621

33.76

Mlig455_020583

Neo: -

Age: Down-Down-Up

KIFAP3

Mlig455_020583 {REF} {Length: 2804} {Pfam: Kinesin-associated protein (KAP) [PF05804.14, score=455.0]; SAP domain [PF02037.29, score=21.9]} {Human: ENSG00000075945, KIFAP3, kinesin associated protein 3, [Score=367, Expect=2e-116]} {Mouse: ENSMUSG00000026585, Kifap3, kinesin-associated protein 3, [Score=364, Expect=1e-114]} {Dmel: FBgn0028421, Kap3, Kinesin associated protein 3, [RH, Score=288, Expect=5e-85]} {Celegans: WBGene00002182, kap-1, Kinesin associated protein kap-1; Kinesin-Associated Protein, [Score=170, Expect=2e-44]} {Smed: dd_Smed_v6_4094_0_2, dd_Smed_v6_4094_0_2, [Score=408, Expect=2e-131]} {RNA1509_2219} {RNA1310_1880.1} {RNA815_617.1}

Cumulative graph for MligTC455_28611

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.298	5.186	0.69729	1.00000
RegionR2	0.115	5.186	0.75309	1.00000
RegionR3	-0.045	5.186	0.88665	1.00000
RegionR4	0.837	5.186	0.02499	0.11926
RegionR5	-0.614	5.186	0.04676	0.17882
RegionR6	-0.326	5.186	0.30962	0.89956
RegionR7	-0.223	5.186	0.57713	1.00000
RegionR8	-0.043	5.186	0.93090	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.757	5.186	0.37719	1.00000
RegenerationR2	0.271	5.186	0.41105	0.82112
RegenerationR3	-0.107	5.186	0.76677	0.97031
RegenerationR4	-0.747	5.186	0.04805	0.35302
RegenerationR5	0.24	5.186	0.50353	0.86040
RegenerationR6	0.095	5.186	0.80267	0.97853
RegenerationBL	0.592	5.186	0.12069	0.41222
RegenerationTP	-0.344	5.186	0.45157	0.86836

Genes with expression patterns similar to MligTC455_28611

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_28611	1621	33.76	Mlig455_020583	Neo: - Age: Down-Down-Up	KIFAP3	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_020583 {REF} {Length: 2804} {Pfam: Kinesin-associated protein (KAP) [PF05804.14, score=455.0]; SAP domain [PF02037.29, score=21.9]} {Human: ENSG00000075945, KIFAP3, kinesin associated protein 3, [Score=367, Expect=2e-116]} {Mouse: ENSMUSG00000026585, Kifap3, kinesin-associated protein 3, [Score=364, Expect=1e-114]} {Dmel: FBgn0028421, Kap3, Kinesin associated protein 3, [RH, Score=288, Expect=5e-85]} {Celegans: WBGene00002182, kap-1, Kinesin associated protein kap-1; Kinesin-Associated Protein, [Score=170, Expect=2e-44]} {Smed: dd_Smed_v6_4094_0_2, dd_Smed_v6_4094_0_2, [Score=408, Expect=2e-131]} {RNA1509_2219} {RNA1310_1880.1} {RNA815_617.1}
2.	MligTC455_37921	1279	26.64	Mlig455_052424	Neo: - Age: -	BEST4	1.816	-	-	-	-	0.859	0.957	Mlig455_052424 {REF} {Length: 4077} {Pfam: Bestrophin, RFP-TM, chloride channel [PF01062.23, score=176.6]} {Human: ENSG00000142959, BEST4, bestrophin 4, [Score=172, Expect=1e-46]} {Mouse: ENSMUSG00000052819, Best2, bestrophin 2, [Score=169, Expect=2e-45]} {Dmel: FBgn0040238, Best1, Bestrophin 1, [Score=192, Expect=2e-52]} {Celegans: WBGene00206487, best-19, Bestrophin homolog, [Score=159, Expect=5e-42]} {Smed: dd_Smed_v6_2084_0_1, dd_Smed_v6_2084_0_1, [Score=296, Expect=2e-94]} {RNA1509_22717, RNA1509_3347} {RNA1310_9226, RNA1509_22717} {RNA1509_22717, RNA815_3180}
3.	MligTC455_18292	790	16.46	Mlig455_013203	Neo: - Age: - Regeneration-downregulated R6: -1.857 Regeneration-depleted R6: -1.857	MEIG1	1.775	-	-	0.819	0.956	-	-	Mlig455_013203 {REF} {Length: 778} {TRANSSPLICED} {Pfam: Meiosis-expressed [PF15163.8, score=127.4]} {Human: ENSG00000197889, MEIG1, meiosis/spermiogenesis associated 1, [RH, Score=101, Expect=3e-29]} {Mouse: ENSMUSG00000026650, Meig1, meiosis expressed gene 1, [RH, Score=98.2, Expect=3e-28]} {Smed: dd_Smed_v6_4620_0_1, dd_Smed_v6_4620_0_1, [RH, Score=112, Expect=2e-34]} {RNA1509_36757} {RNA1310_45574} {RNA815_22417}
4.	MligTC455_44209	764	15.92	Mlig455_011059	Neo: - Age: -	EGR1	1.724	-	-	-	-	0.959	0.765	Mlig455_011059 {REF} {Length: 2031} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=54.2]; Zinc-finger double domain [PF13465.8, score=48.5]; C2H2-type zinc finger [PF13894.8, score=44.8]; C2H2-type zinc finger [PF13912.8, score=32.9]} {Human: ENSG00000120738, EGR1, early growth response 1, [RH, Score=159, Expect=1e-43]; ENSG00000179388, EGR3, early growth response 3, [RH, Score=155, Expect=2e-43]; ENSG00000122877, EGR2, early growth response 2, [RH, Score=154, Expect=6e-42]} {Mouse: ENSMUSG00000038418, Egr1, early growth response 1, [RH, Score=159, Expect=9e-44]; ENSMUSG00000033730, Egr3, early growth response 3, [RH, Score=155, Expect=2e-43]; ENSMUSG00000116458, Egr2, early growth response 2, [RH, Score=154, Expect=3e-42]; ENSMUSG00000037868, Egr2, early growth response 2, [RH, Score=154, Expect=3e-42]} {Dmel: FBgn0003499, sr, stripe, [RH, Score=163, Expect=5e-44]} {Celegans: WBGene00007772, egrh-1, EGR (Early Growth factor Response factor) Homolog, [RH, Score=153, Expect=3e-42]} {Smed: dd_Smed_v6_7091_0_1, dd_Smed_v6_7091_0_1, [RH, Score=136, Expect=1e-36]} {RNA1509_16885, RNA1509_28595} {RNA1310_14689, RNA1509_16885, RNA1509_28595} {RNA1509_16885, RNA1509_28595, RNA815_10071.1}
5.	MligTC455_21171	2153	44.85	Mlig455_020669, Mlig455_059253	Neo: - Age: logFC(26M/2M)=-0.349	TRPM7	1.692	-	-	-	0.982	0.710	-	Mlig455_020669 {REF} {Length: 4721} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=80.4]; Ankyrin repeats (3 copies) [PF12796.9, score=78.5]; Ankyrin repeats (many copies) [PF13857.8, score=70.3]; Ion transport protein [PF00520.33, score=67.6]; Ankyrin repeat [PF13606.8, score=60.8]; Ankyrin repeat [PF00023.32, score=56.0]} {Human: ENSG00000092439, TRPM7, transient receptor potential cation channel subfamily M member 7, [Score=141, Expect=4e-33]; ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=141, Expect=3e-33]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=145, Expect=1e-34]; ENSMUSG00000027365, Trpm7, transient receptor potential cation channel, subfamily M, member 7, [Score=139, Expect=1e-32]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=127, Expect=3e-29]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=82.0, Expect=2e-15]} {Smed: dd_Smed_v6_8382_0_1, dd_Smed_v6_8382_0_1, [RH, Score=239, Expect=9e-65]} {RNA1509_3343} {RNA1310_2392} {RNA815_656} Mlig455_059253 {REF} {Length: 4719} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=79.9]; Ankyrin repeats (3 copies) [PF12796.9, score=78.4]; Ankyrin repeats (many copies) [PF13857.8, score=69.5]; Ion transport protein [PF00520.33, score=67.6]; Ankyrin repeat [PF13606.8, score=61.1]; Ankyrin repeat [PF00023.32, score=55.5]} {Human: ENSG00000092439, TRPM7, transient receptor potential cation channel subfamily M member 7, [Score=141, Expect=4e-33]; ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=141, Expect=4e-33]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=145, Expect=1e-34]; ENSMUSG00000027365, Trpm7, transient receptor potential cation channel, subfamily M, member 7, [Score=139, Expect=1e-32]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=127, Expect=4e-29]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=82.8, Expect=1e-15]} {Smed: dd_Smed_v6_8382_0_1, dd_Smed_v6_8382_0_1, [RH, Score=239, Expect=6e-65]} {RNA1509_27681, RNA1509_3343, RNA1509_56323} {RNA1310_2392, RNA1509_27681, RNA1509_3343, RNA1509_56323} {RNA1509_27681, RNA1509_3343, RNA1509_56323, RNA815_656}
6.	MligTC455_54336	1846	38.45	Mlig455_070447	Neo: - Age: logFC(26M/2M)=-0.323	CEP135	1.665	-	-	0.952	-	-	0.713	Mlig455_070447 {REF} {Length: 4893} {Pfam: Ezrin/radixin/moesin family [PF00769.21, score=18.9]} {Human: ENSG00000174799, CEP135, centrosomal protein 135, [Score=327, Expect=4e-96]} {Mouse: ENSMUSG00000036403, Cep135, centrosomal protein 135, [Score=296, Expect=2e-85]; ENSMUSG00000060771, Tsga10, testis specific 10, [Score=283, Expect=8e-84]} {Dmel: FBgn0036480, Cep135, Centrosomal protein 135kDa, [RH, Score=92.0, Expect=1e-18]} {Smed: dd_Smed_v6_5218_0_1, dd_Smed_v6_5218_0_1, [Score=376, Expect=1e-116]} {RNA1509_41811} {RNA1310_1540} {RNA815_400.1}
7.	MligTC455_48103	628	13.08	Mlig455_057218	Neo: - Age: Up-Up-Down	RGS22	1.657	-	-	-	0.950	-	0.707	Mlig455_057218 {REF} {Length: 3461} {Pfam: Regulator of G protein signaling domain [PF00615.21, score=26.0]} {Human: ENSG00000132554, RGS22, regulator of G protein signaling 22, [RH, Score=72.4, Expect=3e-12]} {Mouse: ENSMUSG00000037627, Rgs22, regulator of G-protein signalling 22, [RH, Score=56.6, Expect=1e-07]} {Smed: dd_Smed_v6_11778_0_1, dd_Smed_v6_11778_0_1, [Score=246, Expect=4e-68]} {RNA1509_2536} {RNA1310_3477} {RNA815_616.1}
8.	MligTC455_18482	285	5.93	Mlig455_064436	Neo: - Age: logFC(26M/2M)=-0.481 Region-enriched R5: 2.786/0.00230	IFT88	0.962	-	-	-	0.962	-	-	Mlig455_064436 {REF} {Length: 3056} {Pfam: Tetratricopeptide repeat [PF07719.19, score=58.6]; Tetratricopeptide repeat [PF13174.8, score=48.4]; Tetratricopeptide repeat [PF13424.8, score=48.4]; Tetratricopeptide repeat [PF00515.30, score=45.1]; Tetratricopeptide repeat [PF13432.8, score=43.0]; Tetratricopeptide repeat [PF14559.8, score=42.3]; Tetratricopeptide repeat [PF13181.8, score=40.3]; Tetratricopeptide repeat [PF13428.8, score=38.1]; Tetratricopeptide repeat [PF13176.8, score=32.4]; Tetratricopeptide repeat [PF13371.8, score=28.8]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=26.4]; TPR repeat [PF13414.8, score=21.4]; Tetratricopeptide repeat [PF13429.8, score=21.3]} {Human: ENSG00000032742, IFT88, intraflagellar transport 88, [Score=365, Expect=4e-119]} {Mouse: ENSMUSG00000040040, Ift88, intraflagellar transport 88, [Score=390, Expect=1e-128]} {Dmel: FBgn0016919, nompB, no mechanoreceptor potential B, [Score=136, Expect=1e-34]} {Celegans: WBGene00003885, osm-5, OSM-5, [Score=252, Expect=2e-76]} {Smed: dd_Smed_v6_5484_0_1, dd_Smed_v6_5484_0_1, [Score=441, Expect=2e-148]} {RNA1509_4056} {RNA1310_1829} {RNA815_705}
9.	MligTC455_49765	287	5.98	Mlig455_037196	Neo: - Age: Up-Down-Down	TTC39A	0.96	-	-	-	0.960	-	-	Mlig455_037196 {REF} {Length: 2574} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF3808) [PF10300.11, score=331.1]} {Human: ENSG00000085831, TTC39A, tetratricopeptide repeat domain 39A, [Score=302, Expect=1e-93]} {Mouse: ENSMUSG00000028555, Ttc39a, tetratricopeptide repeat domain 39A, [Score=313, Expect=5e-98]} {Celegans: WBGene00016314, C32D5.6, [Score=234, Expect=1e-68]} {Smed: dd_Smed_v6_6902_0_1, dd_Smed_v6_6902_0_1, [Score=347, Expect=6e-111]} {RNA1509_31140, RNA1509_31525} {RNA1310_3012.1, RNA1509_31140, RNA1509_31525} {RNA1509_31140, RNA1509_31525, RNA815_12014}
10.	MligTC455_40038	463	9.64	Mlig455_044413	Neo: - Age: Down-Up-Up		0.959	-	-	-	0.959	-	-	Mlig455_044413 {REF} {Length: 1167} {Pfam: Fruit fly transformer protein [PF06495.13, score=22.2]; Ets-domain [PF00178.24, score=22.0]; Coronavirus nucleocapsid [PF00937.20, score=18.0]} {RNA1509_38421, RNA1509_58641} {RNA1310_33082, RNA1509_38421, RNA1509_58641} {RNA1509_38421, RNA1509_58641, RNA815_26283}
11.	MligTC455_47329	793	16.52	Mlig455_025847, Mlig455_025942	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.434	DSTYK	0.955	-	-	-	0.955	-	-	Mlig455_025847 {REF} {Length: 4190} {Pfam: Protein kinase domain [PF00069.27, score=136.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=120.6]; Dynamin family [PF00350.25, score=73.6]; 50S ribosome-binding GTPase [PF01926.25, score=31.7]; Elongation factor Tu GTP binding domain [PF00009.29, score=26.7]; Gtr1/RagA G protein conserved region [PF04670.14, score=19.7]} {Human: ENSG00000133059, DSTYK, dual serine/threonine and tyrosine protein kinase, [Score=179, Expect=1e-45]} {Mouse: ENSMUSG00000042046, Dstyk, dual serine/threonine and tyrosine protein kinase, [Score=193, Expect=2e-50]} {Dmel: FBgn0266465, GckIII, Germinal centre kinase III, [Score=95.9, Expect=5e-20]} {Celegans: WBGene00013643, Y105C5A.24, [Score=100, Expect=9e-22]} {Smed: dd_Smed_v6_1371_0_1, dd_Smed_v6_1371_0_1, [RH, Score=401, Expect=6e-125]} {RNA1509_27256, RNA1509_31736} {RNA1310_3463.1, RNA1509_27256} {RNA1509_27256, RNA815_1104.1} Mlig455_025942 {REF} {Length: 4065} {Pfam: Protein kinase domain [PF00069.27, score=135.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=121.1]; Dynamin family [PF00350.25, score=73.6]; 50S ribosome-binding GTPase [PF01926.25, score=31.7]; Elongation factor Tu GTP binding domain [PF00009.29, score=28.6]; Gtr1/RagA G protein conserved region [PF04670.14, score=19.5]} {Human: ENSG00000133059, DSTYK, dual serine/threonine and tyrosine protein kinase, [Score=181, Expect=2e-46]} {Mouse: ENSMUSG00000042046, Dstyk, dual serine/threonine and tyrosine protein kinase, [Score=195, Expect=3e-51]} {Dmel: FBgn0266465, GckIII, Germinal centre kinase III, [Score=97.8, Expect=1e-20]} {Celegans: WBGene00013643, Y105C5A.24, [Score=99.8, Expect=1e-21]} {Smed: dd_Smed_v6_1371_0_1, dd_Smed_v6_1371_0_1, [RH, Score=397, Expect=2e-123]} {RNA1509_31736} {RNA1310_3463.1} {RNA815_1104.1}
12.	MligTC455_35890	1563	32.56	Mlig455_047529, Mlig455_047538, Mlig455_059662	Neo: - Age: -	IFT80	0.953	-	-	-	0.953	-	-	Mlig455_047529 {REF} {Length: 2724} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=55.0]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=38.4]} {Human: ENSG00000068885, IFT80, intraflagellar transport 80, [RH, Score=871, Expect=0.0]} {Mouse: ENSMUSG00000027778, Ift80, intraflagellar transport 80, [RH, Score=868, Expect=0.0]} {Dmel: FBgn0032891, Oseg5, Outer segment 5, [RH, Score=447, Expect=7e-146]} {Celegans: WBGene00000484, che-2, CHE-2 protein, [RH, Score=581, Expect=0.0]} {Smed: dd_Smed_v6_9110_0_1, dd_Smed_v6_9110_0_1, [RH, Score=793, Expect=0.0]} {RNA1509_7485} {RNA1310_7061, RNA1509_7485} {RNA1509_7485, RNA815_2221} Mlig455_047538 {REF} {Length: 2547} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=52.2]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=35.7]} {Human: ENSG00000068885, IFT80, intraflagellar transport 80, [Score=703, Expect=0.0]} {Mouse: ENSMUSG00000027778, Ift80, intraflagellar transport 80, [Score=703, Expect=0.0]} {Dmel: FBgn0032891, Oseg5, Outer segment 5, [Score=358, Expect=2e-113]} {Celegans: WBGene00000484, che-2, CHE-2 protein, [Score=451, Expect=3e-149]} {Smed: dd_Smed_v6_9110_0_1, dd_Smed_v6_9110_0_1, [Score=620, Expect=0.0]} {RNA1509_7485} {RNA1310_7061} {RNA815_2221} Mlig455_059662 {REF} {Length: 2718} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=54.8]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=38.1]} {Human: ENSG00000068885, IFT80, intraflagellar transport 80, [RH, Score=871, Expect=0.0]} {Mouse: ENSMUSG00000027778, Ift80, intraflagellar transport 80, [RH, Score=869, Expect=0.0]} {Dmel: FBgn0032891, Oseg5, Outer segment 5, [RH, Score=448, Expect=2e-146]} {Celegans: WBGene00000484, che-2, CHE-2 protein, [RH, Score=581, Expect=0.0]} {Smed: dd_Smed_v6_9110_0_1, dd_Smed_v6_9110_0_1, [RH, Score=794, Expect=0.0]} {RNA1509_7485} {RNA1310_7061} {RNA815_2221}

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