TomoSeq data search

Data search

Results for MligTC455_28618

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_28618

156

3.25

Mlig455_024007

Neo: -

Age: -

SNRK

Mlig455_024007 {REF} {Length: 4949} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=226.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=141.6]; Kinase-like [PF14531.8, score=33.0]} {Human: ENSG00000163788, SNRK, SNF related kinase, [Score=441, Expect=8e-143]} {Mouse: ENSMUSG00000038145, Snrk, SNF related kinase, [Score=436, Expect=3e-141]} {Dmel: FBgn0033915, CG8485, [RH, Score=434, Expect=2e-139]} {Celegans: WBGene00013994, ZK524.4, [RH, Score=416, Expect=4e-131]} {Smed: dd_Smed_v6_12465_0_1, dd_Smed_v6_12465_0_1, [RH, Score=442, Expect=2e-140]} {RNA1509_30768} {RNA1310_6284, RNA1509_30768} {RNA1509_30768, RNA815_1300}

Cumulative graph for MligTC455_28618

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.928	2.37	0.59232	1.00000
RegionR2	0.444	2.37	0.52582	0.89869
RegionR3	-0.773	2.37	0.21794	0.75907
RegionR4	-0.592	2.37	0.40315	0.72982
RegionR5	0.412	2.37	0.39862	0.75535
RegionR6	-0.661	2.37	0.31499	0.90364
RegionR7	-0.057	2.37	0.95005	1.00000
RegionR8	0.299	2.37	0.78514	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-6.008	2.37	0.24360	0.96633
RegenerationR2	0.19	2.37	0.70533	0.95820
RegenerationR3	-0.24	2.37	0.73550	0.95921
RegenerationR4	0.822	2.37	0.21219	0.65976
RegenerationR5	-0.196	2.37	0.71135	0.95592
RegenerationR6	0.438	2.37	0.54290	0.83456
RegenerationBL	0.497	2.37	0.55702	0.91252
RegenerationTP	0.21	2.37	0.82133	1.00000

Genes with expression patterns similar to MligTC455_28618

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_28618	156	3.25	Mlig455_024007	Neo: - Age: -	SNRK	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_024007 {REF} {Length: 4949} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=226.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=141.6]; Kinase-like [PF14531.8, score=33.0]} {Human: ENSG00000163788, SNRK, SNF related kinase, [Score=441, Expect=8e-143]} {Mouse: ENSMUSG00000038145, Snrk, SNF related kinase, [Score=436, Expect=3e-141]} {Dmel: FBgn0033915, CG8485, [RH, Score=434, Expect=2e-139]} {Celegans: WBGene00013994, ZK524.4, [RH, Score=416, Expect=4e-131]} {Smed: dd_Smed_v6_12465_0_1, dd_Smed_v6_12465_0_1, [RH, Score=442, Expect=2e-140]} {RNA1509_30768} {RNA1310_6284, RNA1509_30768} {RNA1509_30768, RNA815_1300}
2.	MligTC455_21771	161	3.36	Mlig455_032111	Neo: - Age: Down-Up-Down		0.968	-	-	-	0.968	-	-	Mlig455_032111 {REF} {Length: 469} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_34082} {RNA1310_33927} {RNA815_30713}
3.	MligTC455_45310	777	16.19	Mlig455_008391, Mlig455_008409	Neo: - Age: -	RUBCN	0.956	-	-	-	0.956	-	-	Mlig455_008391 {REF} {Length: 4034} {TRANSSPLICED} {Pfam: Putative zinc-RING and/or ribbon [PF13901.8, score=131.0]; RUN domain [PF02759.21, score=47.6]; RecR protein [PF02132.17, score=18.3]} {Human: ENSG00000145016, RUBCN, RUN and cysteine rich domain containing beclin 1 interacting protein, [RH, Score=90.1, Expect=9e-18]; ENSG00000178385, PLEKHM3, pleckstrin homology domain containing M3, [RH, Score=88.2, Expect=3e-17]; ENSG00000285005, PLEKHM3, pleckstrin homology domain containing M3, [RH, Score=88.2, Expect=3e-17]; ENSG00000225190, PLEKHM1, pleckstrin homology and RUN domain containing M1, [RH, Score=85.9, Expect=2e-17]; ENSG00000277111, PLEKHM1, pleckstrin homology and RUN domain containing M1, [RH, Score=85.9, Expect=2e-17]; ENSG00000276358, PLEKHM1, pleckstrin homology and RUN domain containing M1, [RH, Score=85.9, Expect=2e-17]} {Mouse: ENSMUSG00000035629, Rubcn, RUN domain and cysteine-rich domain containing, Beclin 1-interacting protein, [RH, Score=91.3, Expect=2e-18]} {Dmel: FBgn0034694, CG6613, [RH, Score=95.9, Expect=6e-20]} {Celegans: WBGene00013093, cup-14, [RH, Score=56.6, Expect=6e-08]} {Smed: dd_Smed_v6_4810_0_3, dd_Smed_v6_4810_0_3, [RH, Score=136, Expect=2e-33]} {RNA1509_16367} {RNA1310_4524.1} {RNA815_5927} Mlig455_008409 {REF} {Length: 4036} {TRANSSPLICED} {Pfam: Putative zinc-RING and/or ribbon [PF13901.8, score=131.0]; RUN domain [PF02759.21, score=47.6]; RecR protein [PF02132.17, score=18.3]} {Human: ENSG00000145016, RUBCN, RUN and cysteine rich domain containing beclin 1 interacting protein, [RH, Score=90.5, Expect=7e-18]; ENSG00000285005, PLEKHM3, pleckstrin homology domain containing M3, [RH, Score=88.2, Expect=3e-17]; ENSG00000178385, PLEKHM3, pleckstrin homology domain containing M3, [RH, Score=88.2, Expect=3e-17]; ENSG00000276358, PLEKHM1, pleckstrin homology and RUN domain containing M1, [RH, Score=86.3, Expect=2e-17]; ENSG00000277111, PLEKHM1, pleckstrin homology and RUN domain containing M1, [RH, Score=86.3, Expect=2e-17]; ENSG00000225190, PLEKHM1, pleckstrin homology and RUN domain containing M1, [RH, Score=86.3, Expect=2e-17]} {Mouse: ENSMUSG00000035629, Rubcn, RUN domain and cysteine-rich domain containing, Beclin 1-interacting protein, [RH, Score=91.7, Expect=2e-18]} {Dmel: FBgn0034694, CG6613, [RH, Score=95.9, Expect=5e-20]} {Celegans: WBGene00013093, cup-14, [RH, Score=56.6, Expect=7e-08]} {Smed: dd_Smed_v6_4810_0_3, dd_Smed_v6_4810_0_3, [RH, Score=136, Expect=2e-33]} {RNA1509_16367} {RNA1310_4524.1} {RNA815_5927}
4.	MligTC455_36149	237	4.93	Mlig455_067291	Neo: - Age: Down-Down-Up		0.954	-	-	0.954	-	-	-	Mlig455_067291 {REF} {Length: 4084} {RNA1509_54264} {RNA1310_5666.1} {RNA815_1552}
5.	MligTC455_53142	107	2.23	Mlig455_026433	Neo: - Age: Down-Up-Down	SSUH2	0.953	-	-	-	0.953	-	-	Mlig455_026433 {REF} {Length: 2386} {Human: ENSG00000125046, SSUH2, ssu-2 homolog (C. elegans), [Score=214, Expect=1e-64]} {Mouse: ENSMUSG00000034387, Ssu2, ssu-2 homolog (C. elegans), [Score=181, Expect=2e-52]} {RNA1509_6425} {RNA1310_10577} {RNA815_10006}

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