Data search
Results for MligTC455_28619
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_28619 | 127 | 2.65 | Mlig455_055879 | Neo: - Age: - |
SNRK | Mlig455_055879 {REF} {Length: 5139} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=229.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=143.3]; Kinase-like [PF14531.8, score=34.9]} {Human: ENSG00000163788, SNRK, SNF related kinase, [Score=441, Expect=7e-143]} {Mouse: ENSMUSG00000038145, Snrk, SNF related kinase, [Score=435, Expect=4e-141]} {Dmel: FBgn0033915, CG8485, [RH, Score=434, Expect=2e-139]} {Celegans: WBGene00013994, ZK524.4, [RH, Score=418, Expect=8e-132]} {Smed: dd_Smed_v6_12465_0_1, dd_Smed_v6_12465_0_1, [RH, Score=441, Expect=6e-140]} {RNA1509_30768} {RNA1310_6284} {RNA815_1300} |
Cumulative graph for MligTC455_28619
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -4.583 | 2.203 | 0.35397 | 0.99743 | |
| RegionR2 | 0.122 | 2.203 | 0.81686 | 1.00000 | |
| RegionR3 | 0.08 | 2.203 | 0.82835 | 1.00000 | |
| RegionR4 | 0.664 | 2.203 | 0.54940 | 0.87038 | |
| RegionR5 | 1.008 | 2.203 | 0.24893 | 0.56437 | |
| RegionR6 | 0.626 | 2.203 | 0.52977 | 1.00000 | |
| RegionR7 | 0.137 | 2.203 | 0.82115 | 1.00000 | |
| RegionR8 | 1.944 | 2.203 | 0.11209 | 0.62011 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.67 | 2.203 | 0.99996 | 1.00000 | |
| RegenerationR2 | 0.285 | 2.203 | 0.59811 | 0.91508 | |
| RegenerationR3 | 0.463 | 2.203 | 0.50246 | 0.85804 | |
| RegenerationR4 | 0.296 | 2.203 | 0.67588 | 0.94421 | |
| RegenerationR5 | 0.068 | 2.203 | 0.91282 | 1.00000 | |
| RegenerationR6 | -0.827 | 2.203 | 0.26482 | 0.61481 | |
| RegenerationBL | -1.15 | 2.203 | 0.24882 | 0.60453 | |
| RegenerationTP | -0.793 | 2.203 | 0.43413 | 0.85576 |
Genes with expression patterns similar to MligTC455_28619
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_28619 | 127 | 2.65 | Mlig455_055879 | Neo: - Age: - |
SNRK | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_055879 {REF} {Length: 5139} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=229.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=143.3]; Kinase-like [PF14531.8, score=34.9]} {Human: ENSG00000163788, SNRK, SNF related kinase, [Score=441, Expect=7e-143]} {Mouse: ENSMUSG00000038145, Snrk, SNF related kinase, [Score=435, Expect=4e-141]} {Dmel: FBgn0033915, CG8485, [RH, Score=434, Expect=2e-139]} {Celegans: WBGene00013994, ZK524.4, [RH, Score=418, Expect=8e-132]} {Smed: dd_Smed_v6_12465_0_1, dd_Smed_v6_12465_0_1, [RH, Score=441, Expect=6e-140]} {RNA1509_30768} {RNA1310_6284} {RNA815_1300} |
| 2. | MligTC455_22367 | 136 | 2.83 | Mlig455_005948 | Neo: - Age: Down-Down-Up, logFC(26M/2M)=4.774 Regeneration-enriched R2: 8.304 |
0.972 | - | - | - | - | 0.972 | - | Mlig455_005948 {REF} {Length: 1005} {Pfam: Kazal-type serine protease inhibitor domain [PF00050.23, score=74.2]; Kazal-type serine protease inhibitor domain [PF07648.17, score=70.6]} {Mouse: ENSMUSG00000041936, Agrn, agrin, [Score=50.8, Expect=6e-07]} {Dmel: FBgn0052354, CG32354, [Score=52.8, Expect=8e-08]} {Celegans: WBGene00044564, ZK813.6, [RH, Score=47.8, Expect=2e-06]} {RNA1509_43736} {RNA1310_41704} {RNA815_32394} | |
| 3. | MligTC455_29232 | 131 | 2.72 | Mlig455_050150 | Neo: - Age: - Regeneration-downregulated BL: -4.109 Regeneration-depleted BL: -4.109 |
PCDH9 | 0.966 | - | - | 0.966 | - | - | - | Mlig455_050150 {REF} {Length: 3993} {Pfam: Cadherin domain [PF00028.19, score=289.2]; Cadherin-like [PF08266.14, score=40.2]; Cadherin-like [PF16184.7, score=34.6]} {Human: ENSG00000184226, PCDH9, protocadherin 9, [Score=302, Expect=4e-85]} {Mouse: ENSMUSG00000034755, Pcdh11x, protocadherin 11 X-linked, [RH, Score=307, Expect=1e-86]} {Dmel: FBgn0284247, ds, dachsous, [Score=207, Expect=7e-54]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=169, Expect=3e-42]} {Smed: dd_Smed_v6_21489_0_1, dd_Smed_v6_21489_0_1, [Score=330, Expect=2e-97]} {RNA1310_46914} |
| 4. | MligTC455_18902 | 170 | 3.55 | Mlig455_034019 | Neo: - |
TMEM136 | 0.957 | - | - | - | - | - | 0.957 | Mlig455_034019 {REF} {Length: 3824} {TRANSSPLICED} {Pfam: TLC domain [PF03798.18, score=62.1]} {Human: ENSG00000181264, TMEM136, transmembrane protein 136, [Score=117, Expect=4e-31]} {Mouse: ENSMUSG00000048503, Tmem136, transmembrane protein 136, [Score=115, Expect=1e-30]} {Smed: dd_Smed_v6_10466_0_2, dd_Smed_v6_10466_0_2, [Score=102, Expect=4e-26]} {RNA1509_51840} {RNA1310_27654, RNA1509_51840} {RNA1509_51840, RNA815_12680} |
| 5. | MligTC455_24054 | 364 | 7.59 | Mlig455_007103 | Neo: - Age: Up-Down-Down Region-enriched R7: 2.228/0.02436 |
MCF2L | 0.956 | - | - | 0.956 | - | - | - | Mlig455_007103 {REF} {Length: 5622} {TRANSSPLICED} {Pfam: RhoGEF domain [PF00621.22, score=93.7]; Variant SH3 domain [PF07653.19, score=28.5]; Variant SH3 domain [PF14604.8, score=25.3]; Pleckstrin homology domain [PF15411.8, score=20.0]} {Human: ENSG00000126217, MCF2L, MCF.2 cell line derived transforming sequence like, [Score=198, Expect=3e-51]} {Mouse: ENSMUSG00000031442, Mcf2l, mcf.2 transforming sequence-like, [Score=198, Expect=1e-51]} {Dmel: FBgn0050440, CG30440, [RH, Score=168, Expect=4e-42]} {Celegans: WBGene00006496, cgef-1, CDC-42 Guanine nucleotide Exchange Factor, [RH, Score=144, Expect=7e-35]} {Smed: dd_Smed_v6_4803_0_1, dd_Smed_v6_4803_0_1, [Score=73.6, Expect=4e-13]} {RNA1509_15767} {RNA1310_4419.1} {RNA815_8323} |
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