TomoSeq data search

Data search

Results for MligTC455_28634

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_28634	818	17.04	Mlig455_021931, Mlig455_022024	Neo: - Age: Up-Down-Down	DLGAP2, DLGAP4	Mlig455_021931 {REF} {Length: 6919} {TRANSSPLICED} {Pfam: Guanylate-kinase-associated protein (GKAP) protein [PF03359.15, score=57.6]} {Human: ENSG00000080845, DLGAP4, DLG associated protein 4, [RH, Score=64.7, Expect=6e-10]; ENSG00000198010, DLGAP2, DLG associated protein 2, [RH, Score=64.7, Expect=5e-10]; ENSG00000274161, DLGAP2, DLG associated protein 2, [RH, Score=64.7, Expect=6e-10]; ENSG00000282318, DLGAP2, DLG associated protein 2, [RH, Score=63.9, Expect=7e-10]; ENSG00000170579, DLGAP1, DLG associated protein 1, [RH, Score=62.0, Expect=4e-09]} {Mouse: ENSMUSG00000061689, Dlgap4, DLG associated protein 4, [RH, Score=64.3, Expect=5e-10]; ENSMUSG00000003279, Dlgap1, DLG associated protein 1, [RH, Score=62.4, Expect=2e-09]} {Dmel: FBgn0259978, vlc, vulcan, [RH, Score=75.5, Expect=9e-14]} {Smed: dd_Smed_v6_5253_0_2, dd_Smed_v6_5253_0_2, [Score=84.0, Expect=8e-17]} {RNA1509_39759, RNA1509_5017} {RNA1310_6809.1, RNA1509_39759, RNA1509_5017} {RNA1509_39759, RNA1509_5017, RNA815_4607} Mlig455_022024 {REF} {Length: 5935} {TRANSSPLICED} {Pfam: Guanylate-kinase-associated protein (GKAP) protein [PF03359.15, score=57.0]} {Human: ENSG00000274161, DLGAP2, DLG associated protein 2, [RH, Score=64.7, Expect=6e-10]; ENSG00000198010, DLGAP2, DLG associated protein 2, [RH, Score=64.7, Expect=6e-10]; ENSG00000080845, DLGAP4, DLG associated protein 4, [RH, Score=64.7, Expect=6e-10]; ENSG00000282318, DLGAP2, DLG associated protein 2, [RH, Score=63.9, Expect=7e-10]; ENSG00000170579, DLGAP1, DLG associated protein 1, [RH, Score=62.4, Expect=3e-09]} {Mouse: ENSMUSG00000061689, Dlgap4, DLG associated protein 4, [RH, Score=64.3, Expect=5e-10]; ENSMUSG00000003279, Dlgap1, DLG associated protein 1, [RH, Score=62.4, Expect=2e-09]} {Dmel: FBgn0259978, vlc, vulcan, [RH, Score=75.5, Expect=9e-14]} {Smed: dd_Smed_v6_5253_0_1, dd_Smed_v6_5253_0_1, [Score=84.7, Expect=9e-17]} {RNA1509_33542, RNA1509_5017} {RNA1310_6809.1, RNA1509_33542} {RNA1509_33542, RNA815_4607}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_28634

818

17.04

Mlig455_021931, Mlig455_022024

Neo: -

Age: Up-Down-Down

DLGAP2, DLGAP4

Mlig455_021931 {REF} {Length: 6919} {TRANSSPLICED} {Pfam: Guanylate-kinase-associated protein (GKAP) protein [PF03359.15, score=57.6]} {Human: ENSG00000080845, DLGAP4, DLG associated protein 4, [RH, Score=64.7, Expect=6e-10]; ENSG00000198010, DLGAP2, DLG associated protein 2, [RH, Score=64.7, Expect=5e-10]; ENSG00000274161, DLGAP2, DLG associated protein 2, [RH, Score=64.7, Expect=6e-10]; ENSG00000282318, DLGAP2, DLG associated protein 2, [RH, Score=63.9, Expect=7e-10]; ENSG00000170579, DLGAP1, DLG associated protein 1, [RH, Score=62.0, Expect=4e-09]} {Mouse: ENSMUSG00000061689, Dlgap4, DLG associated protein 4, [RH, Score=64.3, Expect=5e-10]; ENSMUSG00000003279, Dlgap1, DLG associated protein 1, [RH, Score=62.4, Expect=2e-09]} {Dmel: FBgn0259978, vlc, vulcan, [RH, Score=75.5, Expect=9e-14]} {Smed: dd_Smed_v6_5253_0_2, dd_Smed_v6_5253_0_2, [Score=84.0, Expect=8e-17]} {RNA1509_39759, RNA1509_5017} {RNA1310_6809.1, RNA1509_39759, RNA1509_5017} {RNA1509_39759, RNA1509_5017, RNA815_4607}

Mlig455_022024 {REF} {Length: 5935} {TRANSSPLICED} {Pfam: Guanylate-kinase-associated protein (GKAP) protein [PF03359.15, score=57.0]} {Human: ENSG00000274161, DLGAP2, DLG associated protein 2, [RH, Score=64.7, Expect=6e-10]; ENSG00000198010, DLGAP2, DLG associated protein 2, [RH, Score=64.7, Expect=6e-10]; ENSG00000080845, DLGAP4, DLG associated protein 4, [RH, Score=64.7, Expect=6e-10]; ENSG00000282318, DLGAP2, DLG associated protein 2, [RH, Score=63.9, Expect=7e-10]; ENSG00000170579, DLGAP1, DLG associated protein 1, [RH, Score=62.4, Expect=3e-09]} {Mouse: ENSMUSG00000061689, Dlgap4, DLG associated protein 4, [RH, Score=64.3, Expect=5e-10]; ENSMUSG00000003279, Dlgap1, DLG associated protein 1, [RH, Score=62.4, Expect=2e-09]} {Dmel: FBgn0259978, vlc, vulcan, [RH, Score=75.5, Expect=9e-14]} {Smed: dd_Smed_v6_5253_0_1, dd_Smed_v6_5253_0_1, [Score=84.7, Expect=9e-17]} {RNA1509_33542, RNA1509_5017} {RNA1310_6809.1, RNA1509_33542} {RNA1509_33542, RNA815_4607}

Cumulative graph for MligTC455_28634

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.213	4.474	0.82403	1.00000
RegionR2	0.56	4.474	0.24722	0.62475
RegionR3	0.249	4.474	0.53982	1.00000
RegionR4	1.22	4.474	0.00769	0.05011
RegionR5	0.373	4.474	0.29479	0.62810
RegionR6	-0.41	4.474	0.33430	0.92209
RegionR7	-0.195	4.474	0.70248	1.00000
RegionR8	-2.01	4.474	0.00926	0.18028

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-6.924	4.474	0.08738	0.79223
RegenerationR2	0.169	4.474	0.68672	0.95146
RegenerationR3	0.267	4.474	0.57096	0.89448
RegenerationR4	-0.42	4.474	0.38820	0.80645
RegenerationR5	0.083	4.474	0.84797	1.00000
RegenerationR6	1.421	4.474	0.00293	0.06267
RegenerationBL	0.14	4.474	0.83652	1.00000
RegenerationTP	2.042	4.474	0.00062	0.03607

Genes with expression patterns similar to MligTC455_28634

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_28634	818	17.04	Mlig455_021931, Mlig455_022024	Neo: - Age: Up-Down-Down	DLGAP2, DLGAP4	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_021931 {REF} {Length: 6919} {TRANSSPLICED} {Pfam: Guanylate-kinase-associated protein (GKAP) protein [PF03359.15, score=57.6]} {Human: ENSG00000080845, DLGAP4, DLG associated protein 4, [RH, Score=64.7, Expect=6e-10]; ENSG00000198010, DLGAP2, DLG associated protein 2, [RH, Score=64.7, Expect=5e-10]; ENSG00000274161, DLGAP2, DLG associated protein 2, [RH, Score=64.7, Expect=6e-10]; ENSG00000282318, DLGAP2, DLG associated protein 2, [RH, Score=63.9, Expect=7e-10]; ENSG00000170579, DLGAP1, DLG associated protein 1, [RH, Score=62.0, Expect=4e-09]} {Mouse: ENSMUSG00000061689, Dlgap4, DLG associated protein 4, [RH, Score=64.3, Expect=5e-10]; ENSMUSG00000003279, Dlgap1, DLG associated protein 1, [RH, Score=62.4, Expect=2e-09]} {Dmel: FBgn0259978, vlc, vulcan, [RH, Score=75.5, Expect=9e-14]} {Smed: dd_Smed_v6_5253_0_2, dd_Smed_v6_5253_0_2, [Score=84.0, Expect=8e-17]} {RNA1509_39759, RNA1509_5017} {RNA1310_6809.1, RNA1509_39759, RNA1509_5017} {RNA1509_39759, RNA1509_5017, RNA815_4607} Mlig455_022024 {REF} {Length: 5935} {TRANSSPLICED} {Pfam: Guanylate-kinase-associated protein (GKAP) protein [PF03359.15, score=57.0]} {Human: ENSG00000274161, DLGAP2, DLG associated protein 2, [RH, Score=64.7, Expect=6e-10]; ENSG00000198010, DLGAP2, DLG associated protein 2, [RH, Score=64.7, Expect=6e-10]; ENSG00000080845, DLGAP4, DLG associated protein 4, [RH, Score=64.7, Expect=6e-10]; ENSG00000282318, DLGAP2, DLG associated protein 2, [RH, Score=63.9, Expect=7e-10]; ENSG00000170579, DLGAP1, DLG associated protein 1, [RH, Score=62.4, Expect=3e-09]} {Mouse: ENSMUSG00000061689, Dlgap4, DLG associated protein 4, [RH, Score=64.3, Expect=5e-10]; ENSMUSG00000003279, Dlgap1, DLG associated protein 1, [RH, Score=62.4, Expect=2e-09]} {Dmel: FBgn0259978, vlc, vulcan, [RH, Score=75.5, Expect=9e-14]} {Smed: dd_Smed_v6_5253_0_1, dd_Smed_v6_5253_0_1, [Score=84.7, Expect=9e-17]} {RNA1509_33542, RNA1509_5017} {RNA1310_6809.1, RNA1509_33542} {RNA1509_33542, RNA815_4607}
2.	MligTC455_46747	352	7.32	Mlig455_040380	Neo: - Age: Up-Down-Up	ANKRD11	0.974	-	-	0.974	-	-	-	Mlig455_040380 {REF} {Length: 5078} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=63.8]; Ankyrin repeats (many copies) [PF13637.8, score=63.7]; Ankyrin repeats (many copies) [PF13857.8, score=62.2]; Ankyrin repeat [PF00023.32, score=53.6]; Ankyrin repeat [PF13606.8, score=43.7]} {Human: ENSG00000167522, ANKRD11, ankyrin repeat domain 11, [RH, Score=134, Expect=1e-30]; ENSG00000101745, ANKRD12, ankyrin repeat domain 12, [RH, Score=128, Expect=5e-29]} {Mouse: ENSMUSG00000035569, Ankrd11, ankyrin repeat domain 11, [RH, Score=134, Expect=4e-31]; ENSMUSG00000034647, Ankrd12, ankyrin repeat domain 12, [RH, Score=129, Expect=2e-29]} {Dmel: FBgn0036305, CG10984, [Score=104, Expect=1e-22]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=91.3, Expect=5e-18]} {Smed: dd_Smed_v6_9297_0_1, dd_Smed_v6_9297_0_1, [Score=152, Expect=2e-37]} {RNA1509_17750} {RNA1310_3406} {RNA815_33283}
3.	MligTC455_31100	67	1.39	Mlig455_015616	Neo: - Age: -	PIF1	0.963	-	-	-	-	0.963	-	Mlig455_015616 {REF} {Length: 5428} {Pfam: PIF1-like helicase [PF05970.16, score=322.6]; Helitron helicase-like domain at N-terminus [PF14214.8, score=186.2]; AAA domain [PF13604.8, score=46.0]; Helicase [PF02689.16, score=22.4]; UvrD-like helicase C-terminal domain [PF13538.8, score=19.8]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=97.1, Expect=1e-19]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=91.3, Expect=4e-18]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=89.7, Expect=1e-17]} {Celegans: WBGene00019136, F59H6.5, [RH, Score=773, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=103, Expect=3e-22]} {RNA1509_48797} {RNA1310_18036.2} {RNA815_25702}
4.	MligTC455_52256	1195	24.9	Mlig455_045130, Mlig455_045164	Neo: - Age: -	SPG21	0.959	-	-	-	0.959	-	-	Mlig455_045130 {REF} {Length: 2055} {Pfam: alpha/beta hydrolase fold [PF00561.22, score=26.0]; Alpha/beta hydrolase family [PF12697.9, score=20.4]; Thioesterase domain [PF00975.22, score=19.6]} {Human: ENSG00000090487, SPG21, SPG21, maspardin, [Score=317, Expect=2e-107]} {Mouse: ENSMUSG00000032388, Spg21, SPG21, maspardin, [Score=316, Expect=2e-107]} {Smed: dd_Smed_v6_4182_0_1, dd_Smed_v6_4182_0_1, [Score=303, Expect=1e-102]} {RNA1509_18282} {RNA1310_12279} {RNA815_31704} Mlig455_045164 {REF} {Length: 2194} {Pfam: alpha/beta hydrolase fold [PF00561.22, score=26.3]; Serine aminopeptidase, S33 [PF12146.10, score=22.0]; Alpha/beta hydrolase family [PF12697.9, score=21.8]} {Human: ENSG00000090487, SPG21, SPG21, maspardin, [RH, Score=342, Expect=5e-117]} {Mouse: ENSMUSG00000032388, Spg21, SPG21, maspardin, [RH, Score=341, Expect=6e-117]} {Smed: dd_Smed_v6_4182_0_1, dd_Smed_v6_4182_0_1, [RH, Score=322, Expect=1e-109]} {RNA1509_18282} {RNA1310_12279} {RNA815_15404}