Data search
Results for MligTC455_28671
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_28671 | 2118 | 44.12 | Mlig455_059758 | Neo: Irradiation Age: - |
CAPRIN1 | Mlig455_059758 {REF} {Length: 2896} {Pfam: Caprin-1 dimerization domain [PF18293.3, score=62.9]} {Human: ENSG00000135387, CAPRIN1, cell cycle associated protein 1, [RH, Score=116, Expect=1e-26]} {Mouse: ENSMUSG00000027184, Caprin1, cell cycle associated protein 1, [RH, Score=118, Expect=2e-27]} {Dmel: FBgn0042134, Capr, Caprin, [RH, Score=86.7, Expect=2e-17]} {Smed: dd_Smed_v6_936_0_1, dd_Smed_v6_936_0_1, [RH, Score=78.6, Expect=2e-15]} {RNA1509_43375, RNA1509_545, RNA1509_7233} {RNA1310_312.1, RNA1509_43375, RNA1509_7233} {RNA1509_43375, RNA1509_7233, RNA815_7184} |
Cumulative graph for MligTC455_28671
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.457 | 5.611 | 0.47628 | 1.00000 | |
| RegionR2 | -0.444 | 5.611 | 0.12539 | 0.43902 | |
| RegionR3 | 0.391 | 5.611 | 0.07481 | 0.48488 | |
| RegionR4 | 0.799 | 5.611 | 0.00221 | 0.01933 | |
| RegionR5 | 0.181 | 5.611 | 0.37442 | 0.72760 | |
| RegionR6 | -0.228 | 5.611 | 0.33416 | 0.92183 | |
| RegionR7 | -0.199 | 5.611 | 0.52807 | 1.00000 | |
| RegionR8 | -0.957 | 5.611 | 0.03407 | 0.36272 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.16 | 5.611 | 0.84157 | 1.00000 | |
| RegenerationR2 | 0.266 | 5.611 | 0.27026 | 0.71618 | |
| RegenerationR3 | -0.125 | 5.611 | 0.62156 | 0.91718 | |
| RegenerationR4 | -0.304 | 5.611 | 0.23476 | 0.68338 | |
| RegenerationR5 | 0.095 | 5.611 | 0.68783 | 0.94703 | |
| RegenerationR6 | 0.796 | 5.611 | 0.00200 | 0.05099 | |
| RegenerationBL | 0.69 | 5.611 | 0.03134 | 0.19815 | |
| RegenerationTP | 0.384 | 5.611 | 0.30851 | 0.75311 |
Genes with expression patterns similar to MligTC455_28671
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_28671 | 2118 | 44.12 | Mlig455_059758 | Neo: Irradiation Age: - |
CAPRIN1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_059758 {REF} {Length: 2896} {Pfam: Caprin-1 dimerization domain [PF18293.3, score=62.9]} {Human: ENSG00000135387, CAPRIN1, cell cycle associated protein 1, [RH, Score=116, Expect=1e-26]} {Mouse: ENSMUSG00000027184, Caprin1, cell cycle associated protein 1, [RH, Score=118, Expect=2e-27]} {Dmel: FBgn0042134, Capr, Caprin, [RH, Score=86.7, Expect=2e-17]} {Smed: dd_Smed_v6_936_0_1, dd_Smed_v6_936_0_1, [RH, Score=78.6, Expect=2e-15]} {RNA1509_43375, RNA1509_545, RNA1509_7233} {RNA1310_312.1, RNA1509_43375, RNA1509_7233} {RNA1509_43375, RNA1509_7233, RNA815_7184} |
| 2. | MligTC455_28672 | 2004 | 41.74 | Mlig455_070308 | Neo: - Age: Down-Down-Down |
CAPRIN1 | 5.783 | 0.858 | 0.961 | 0.994 | 0.992 | 0.983 | 0.995 | Mlig455_070308 {REF} {Length: 2882} {Pfam: Caprin-1 dimerization domain [PF18293.3, score=62.6]} {Human: ENSG00000135387, CAPRIN1, cell cycle associated protein 1, [RH, Score=114, Expect=4e-26]} {Mouse: ENSMUSG00000027184, Caprin1, cell cycle associated protein 1, [RH, Score=116, Expect=6e-27]} {Dmel: FBgn0042134, Capr, Caprin, [RH, Score=87.4, Expect=1e-17]} {Smed: dd_Smed_v6_936_0_1, dd_Smed_v6_936_0_1, [RH, Score=79.3, Expect=1e-15]} {RNA1509_36653, RNA1509_545, RNA1509_9983} {RNA1310_312.1, RNA1509_36653, RNA1509_9983} {RNA1509_36653, RNA1509_9983, RNA815_7184} |
| 3. | MligTC455_28669 | 2337 | 48.68 | Mlig455_054993 | Neo: Neoblast, stringent Age: logFC(26M/2M)=0.321 |
CAPRIN1 | 5.671 | 0.985 | 0.959 | 0.945 | 0.967 | 0.946 | 0.869 | Mlig455_054993 {REF} {Length: 2883} {Pfam: Caprin-1 dimerization domain [PF18293.3, score=62.6]} {Human: ENSG00000135387, CAPRIN1, cell cycle associated protein 1, [RH, Score=114, Expect=5e-26]} {Mouse: ENSMUSG00000027184, Caprin1, cell cycle associated protein 1, [RH, Score=117, Expect=5e-27]} {Dmel: FBgn0042134, Capr, Caprin, [RH, Score=87.0, Expect=2e-17]} {Smed: dd_Smed_v6_936_0_1, dd_Smed_v6_936_0_1, [RH, Score=79.3, Expect=1e-15]} {RNA1509_25627, RNA1509_3695, RNA1509_545, RNA1509_7045} {RNA1310_312.1, RNA1509_25627, RNA1509_3695, RNA1509_7045} {RNA1509_25627, RNA1509_3695, RNA1509_7045, RNA815_7184} |
| 4. | MligTC455_28670 | 2241 | 46.68 | Mlig455_059746 | Neo: Neoblast, stringent Age: - |
CAPRIN1 | 2.663 | - | 0.852 | - | 0.977 | 0.834 | - | Mlig455_059746 {REF} {Length: 2888} {Pfam: Caprin-1 dimerization domain [PF18293.3, score=62.6]} {Human: ENSG00000135387, CAPRIN1, cell cycle associated protein 1, [RH, Score=114, Expect=4e-26]} {Mouse: ENSMUSG00000027184, Caprin1, cell cycle associated protein 1, [RH, Score=116, Expect=8e-27]} {Dmel: FBgn0042134, Capr, Caprin, [RH, Score=87.4, Expect=1e-17]} {Smed: dd_Smed_v6_936_0_1, dd_Smed_v6_936_0_1, [RH, Score=79.3, Expect=1e-15]} {RNA1509_545} {RNA1310_312.1, RNA1509_545} {RNA1509_545, RNA815_7184} |
| 5. | MligTC455_48327 | 2347 | 48.9 | Mlig455_046907 | Neo: - Age: Up-Down-Up Regeneration-enriched BL: 1.482 |
EIF2S3 | 1.881 | - | - | - | 0.955 | 0.926 | - | Mlig455_046907 {REF} {Length: 2665} {TRANSSPLICED} {Pfam: Initiation factor eIF2 gamma, C terminal [PF09173.13, score=114.6]; Elongation factor Tu GTP binding domain [PF00009.29, score=78.7]; Elongation factor Tu domain 2 [PF03144.27, score=44.1]} {Human: ENSG00000130741, EIF2S3, eukaryotic translation initiation factor 2 subunit gamma, [RH, Score=741, Expect=0.0]; ENSG00000180574, EIF2S3B, eukaryotic translation initiation factor 2 subunit gamma B, [RH, Score=736, Expect=0.0]} {Mouse: ENSMUSG00000069049, Eif2s3y, eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked, [RH, Score=745, Expect=0.0]; ENSMUSG00000035150, Eif2s3x, eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked, [RH, Score=741, Expect=0.0]} {Dmel: FBgn0263740, eIF2gamma, eukaryotic translation initiation factor 2 subunit gamma, [RH, Score=713, Expect=0.0]} {Celegans: WBGene00021466, eif-2gamma, Eukaryotic Initiation Factor, [RH, Score=712, Expect=0.0]} {Smed: dd_Smed_v6_980_0_1, dd_Smed_v6_980_0_1, [RH, Score=678, Expect=0.0]} {RNA1509_13308, RNA1509_3210, RNA1509_32670, RNA1509_43746, RNA1509_58895} {RNA1310_16815.1, RNA1509_13308, RNA1509_3210, RNA1509_32670, RNA1509_43746, RNA1509_58895} {RNA1509_13308, RNA1509_3210, RNA1509_32670, RNA1509_43746, RNA1509_58895, RNA815_7319} |
| 6. | MligTC455_48326 | 2328 | 48.51 | Mlig455_016492 | Neo: Int S/G2/M Age: logFC(26M/2M)=1.013 Regeneration-enriched BL: 1.725 |
EIF2S3B | 1.875 | - | - | - | 0.959 | 0.916 | - | Mlig455_016492 {REF} {Length: 2643} {TRANSSPLICED} {Pfam: Elongation factor Tu GTP binding domain [PF00009.29, score=78.9]; Initiation factor eIF2 gamma, C terminal [PF09173.13, score=73.2]; Elongation factor Tu domain 2 [PF03144.27, score=45.3]} {Human: ENSG00000180574, EIF2S3B, eukaryotic translation initiation factor 2 subunit gamma B, [RH, Score=686, Expect=0.0]} {Mouse: ENSMUSG00000069049, Eif2s3y, eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked, [Score=701, Expect=0.0]; ENSMUSG00000035150, Eif2s3x, eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked, [Score=697, Expect=0.0]} {Dmel: FBgn0263740, eIF2gamma, eukaryotic translation initiation factor 2 subunit gamma, [Score=677, Expect=0.0]} {Celegans: WBGene00021466, eif-2gamma, Eukaryotic Initiation Factor, [RH, Score=677, Expect=0.0]} {Smed: dd_Smed_v6_980_0_1, dd_Smed_v6_980_0_1, [Score=634, Expect=0.0]} {RNA1509_3210} {RNA1310_16815.1} {RNA815_7319} |
| 7. | MligTC455_25249 | 828 | 17.26 | Mlig455_018249 | Neo: - Age: - |
1.741 | - | - | - | 0.781 | - | 0.960 | Mlig455_018249 {REF} {Length: 4334} {Pfam: LicD family [PF04991.15, score=65.3]} {Smed: dd_Smed_v6_9951_0_1, dd_Smed_v6_9951_0_1, [RH, Score=175, Expect=1e-52]} {RNA1509_16608, RNA1509_30783, RNA1509_45060} {RNA1310_27450, RNA1509_16608, RNA1509_30783, RNA1509_45060} {RNA1509_16608, RNA1509_30783, RNA1509_45060, RNA815_8075} | |
| 8. | MligTC455_46257 | 625 | 13.01 | Mlig455_033945 | Neo: - Age: - |
EXOC4 | 1.701 | - | - | 0.749 | 0.952 | - | - | Mlig455_033945 {REF} {Length: 2851} {TRANSSPLICED} {Pfam: Sec8 exocyst complex component specific domain [PF04048.16, score=20.0]} {Human: ENSG00000131558, EXOC4, exocyst complex component 4, [RH, Score=167, Expect=5e-42]} {Mouse: ENSMUSG00000029763, Exoc4, exocyst complex component 4, [RH, Score=172, Expect=9e-44]} {Dmel: FBgn0266672, Sec8, Secretory 8, [RH, Score=141, Expect=3e-34]} {Smed: dd_Smed_v6_8308_0_1, dd_Smed_v6_8308_0_1, [RH, Score=106, Expect=3e-23]} {RNA1509_10631} {RNA1310_3681, RNA1509_10631} {RNA1509_10631, RNA815_12175} |
| 9. | MligTC455_44324 | 597 | 12.44 | Mlig455_030643 | Neo: Irradiation Age: - |
SYNCRIP | 1.695 | - | - | - | 0.745 | - | 0.950 | Mlig455_030643 {REF} {Length: 5395} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=141.3]; RNA recognition motif [PF16367.7, score=19.5]} {Human: ENSG00000135316, SYNCRIP, synaptotagmin binding cytoplasmic RNA interacting protein, [Score=268, Expect=1e-79]} {Mouse: ENSMUSG00000032423, Syncrip, synaptotagmin binding, cytoplasmic RNA interacting protein, [Score=266, Expect=2e-79]} {Dmel: FBgn0038826, Syp, Syncrip, [Score=271, Expect=6e-82]} {Celegans: WBGene00002000, hrp-2, HnRNP A1 homolog, [Score=262, Expect=4e-78]} {Smed: dd_Smed_v6_2228_0_1, dd_Smed_v6_2228_0_1, [Score=194, Expect=4e-53]} {RNA1509_16867, RNA1509_24225} {RNA1310_8690.1, RNA1509_16867, RNA1509_24225} {RNA1509_16867, RNA1509_24225, RNA815_17530} |
| 10. | MligTC455_52151 | 384 | 8 | Mlig455_041364 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.195/0.00818 |
DPY19L1 | 0.967 | - | - | - | - | - | 0.967 | Mlig455_041364 {REF} {Length: 3757} {TRANSSPLICED} {Pfam: Q-cell neuroblast polarisation [PF10034.11, score=502.0]} {Human: ENSG00000173852, DPY19L1, dpy-19 like C-mannosyltransferase 1, [RH, Score=424, Expect=7e-138]} {Mouse: ENSMUSG00000043067, Dpy19l1, dpy-19-like 1 (C. elegans), [RH, Score=426, Expect=5e-139]} {Dmel: FBgn0030946, CG6659, [RH, Score=68.6, Expect=1e-11]} {Celegans: WBGene00001078, dpy-19, C-mannosyltransferase dpy-19, [RH, Score=387, Expect=4e-125]} {Smed: dd_Smed_v6_6217_0_1, dd_Smed_v6_6217_0_1, [RH, Score=398, Expect=2e-128]} {RNA1509_1790, RNA1509_40865, RNA1509_45050, RNA1509_45088} {RNA1310_6064.1, RNA1509_1790, RNA1509_40865, RNA1509_45050, RNA1509_45088} {RNA1509_1790, RNA1509_40865, RNA1509_45050, RNA1509_45088, RNA815_594.1} |
| 11. | MligTC455_50910 | 1223 | 25.48 | Mlig455_039519 | Neo: - Age: logFC(26M/2M)=-0.270 Region-enriched R4: 1.934/0.00000 |
PPP1R3A | 0.959 | - | - | - | 0.959 | - | - | Mlig455_039519 {REF} {Length: 2457} {Pfam: Carbohydrate/starch-binding module (family 21) [PF03370.15, score=95.8]; Starch/carbohydrate-binding module (family 53) [PF16760.7, score=48.8]} {Human: ENSG00000154415, PPP1R3A, protein phosphatase 1 regulatory subunit 3A, [Score=104, Expect=2e-23]} {Mouse: ENSMUSG00000042717, Ppp1r3a, protein phosphatase 1, regulatory subunit 3A, [RH, Score=105, Expect=4e-24]} {Dmel: FBgn0036862, Gbs-76A, Glycogen binding subunit 76A, [Score=132, Expect=2e-33]} {Celegans: WBGene00019211, H18N23.2, Protein phosphatase 1 regulatory subunit, [Score=85.9, Expect=2e-18]} {Smed: dd_Smed_v6_4959_0_1, dd_Smed_v6_4959_0_1, [Score=156, Expect=3e-45]} {RNA1509_10448, RNA1509_20565, RNA1509_28737, RNA1509_33243, RNA1509_4030} {RNA1310_10714, RNA1509_10448, RNA1509_20565, RNA1509_28737, RNA1509_33243, RNA1509_4030} {RNA1509_10448, RNA1509_20565, RNA1509_28737, RNA1509_33243, RNA1509_4030, RNA815_3667.1} |
| 12. | MligTC455_46019 | 1165 | 24.26 | Mlig455_055584 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.395 |
RRP8 | 0.956 | - | - | - | 0.956 | - | - | Mlig455_055584 {REF} {Length: 1087} {Pfam: Hypothetical methyltransferase [PF05148.17, score=214.5]; Methyltransferase domain [PF08241.14, score=20.8]} {Human: ENSG00000132275, RRP8, ribosomal RNA processing 8, [RH, Score=177, Expect=3e-51]} {Mouse: ENSMUSG00000030888, Rrp8, ribosomal RNA processing 8, methyltransferase, homolog (yeast), [RH, Score=182, Expect=3e-53]} {Dmel: FBgn0034422, CG7137, [RH, Score=152, Expect=5e-43]} {Celegans: WBGene00020296, T07A9.8, Ribosomal RNA-processing protein 8, [RH, Score=175, Expect=3e-52]} {Smed: dd_Smed_v6_11164_0_1, dd_Smed_v6_11164_0_1, [RH, Score=163, Expect=2e-48]} {RNA1509_28448} {RNA1310_32382} {RNA815_14841} |
| 13. | MligTC455_35734 | 1207 | 25.15 | Mlig455_016267 | Neo: - Age: - |
PBX1 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_016267 {REF} {Length: 2584} {TRANSSPLICED} {Pfam: PBC domain [PF03792.15, score=246.8]; Homeodomain [PF00046.31, score=70.3]; Homeobox KN domain [PF05920.13, score=55.9]} {Human: ENSG00000185630, PBX1, PBX homeobox 1, [RH, Score=398, Expect=2e-139]; ENSG00000167081, PBX3, PBX homeobox 3, [RH, Score=395, Expect=9e-137]} {Mouse: ENSMUSG00000052534, Pbx1, pre B cell leukemia homeobox 1, [RH, Score=398, Expect=2e-139]; ENSMUSG00000038718, Pbx3, pre B cell leukemia homeobox 3, [RH, Score=395, Expect=5e-137]} {Dmel: FBgn0000611, exd, extradenticle, [RH, Score=401, Expect=3e-140]} {Celegans: WBGene00000443, ceh-20, Homeobox protein ceh-20, [RH, Score=355, Expect=1e-122]} {Smed: dd_Smed_v6_3098_0_1, dd_Smed_v6_3098_0_1, [RH, Score=370, Expect=6e-128]} {RNA1509_47841, RNA1509_52495, RNA1509_8058} {RNA1310_11055, RNA1509_47841, RNA1509_52495, RNA1509_8058} {RNA1509_47841, RNA1509_52495, RNA1509_8058, RNA815_18271} |
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