TomoSeq data search

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Results for MligTC455_28683

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_28683	19	0.40	Mlig455_044662, Mlig455_044720	Neo: - Age: Up-Down-Up	DHH	Mlig455_044662 {REF} {Length: 3721} {Pfam: Hint module [PF01079.22, score=137.3]; Hedgehog amino-terminal signalling domain [PF01085.20, score=74.1]} {Human: ENSG00000139549, DHH, desert hedgehog, [RH, Score=125, Expect=2e-31]} {Mouse: ENSMUSG00000023000, Dhh, desert hedgehog, [RH, Score=129, Expect=8e-33]} {Dmel: FBgn0004644, hh, hedgehog, [RH, Score=111, Expect=2e-26]} {Celegans: WBGene00006947, wrt-1, Warthog protein 1 Warthog protein 1 N-product Warthog protein 1 C-product, [RH, Score=80.9, Expect=3e-16]} {RNA1509_40172} {RNA1310_26467, RNA1509_40172} {RNA1509_40172, RNA815_14382} Mlig455_044720 {REF} {Length: 3046} {Pfam: Hint module [PF01079.22, score=136.8]; Hedgehog amino-terminal signalling domain [PF01085.20, score=74.0]} {Human: ENSG00000139549, DHH, desert hedgehog, [RH, Score=125, Expect=3e-31]} {Mouse: ENSMUSG00000023000, Dhh, desert hedgehog, [RH, Score=128, Expect=1e-32]} {Dmel: FBgn0004644, hh, hedgehog, [RH, Score=112, Expect=1e-26]} {Celegans: WBGene00006947, wrt-1, Warthog protein 1 Warthog protein 1 N-product Warthog protein 1 C-product, [RH, Score=81.3, Expect=2e-16]} {RNA1509_40172} {RNA1310_26467} {RNA815_14382}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_28683

0.40

Mlig455_044662, Mlig455_044720

Neo: -

Age: Up-Down-Up

DHH

Mlig455_044662 {REF} {Length: 3721} {Pfam: Hint module [PF01079.22, score=137.3]; Hedgehog amino-terminal signalling domain [PF01085.20, score=74.1]} {Human: ENSG00000139549, DHH, desert hedgehog, [RH, Score=125, Expect=2e-31]} {Mouse: ENSMUSG00000023000, Dhh, desert hedgehog, [RH, Score=129, Expect=8e-33]} {Dmel: FBgn0004644, hh, hedgehog, [RH, Score=111, Expect=2e-26]} {Celegans: WBGene00006947, wrt-1, Warthog protein 1 Warthog protein 1 N-product Warthog protein 1 C-product, [RH, Score=80.9, Expect=3e-16]} {RNA1509_40172} {RNA1310_26467, RNA1509_40172} {RNA1509_40172, RNA815_14382}

Mlig455_044720 {REF} {Length: 3046} {Pfam: Hint module [PF01079.22, score=136.8]; Hedgehog amino-terminal signalling domain [PF01085.20, score=74.0]} {Human: ENSG00000139549, DHH, desert hedgehog, [RH, Score=125, Expect=3e-31]} {Mouse: ENSMUSG00000023000, Dhh, desert hedgehog, [RH, Score=128, Expect=1e-32]} {Dmel: FBgn0004644, hh, hedgehog, [RH, Score=112, Expect=1e-26]} {Celegans: WBGene00006947, wrt-1, Warthog protein 1 Warthog protein 1 N-product Warthog protein 1 C-product, [RH, Score=81.3, Expect=2e-16]} {RNA1509_40172} {RNA1310_26467} {RNA815_14382}

Cumulative graph for MligTC455_28683

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	1.013	0.704	1.00000	1.00000
RegionR2	-0.651	0.704	1.00000	1.00000
RegionR3	-1.42	0.704	1.00000	1.00000
RegionR4	0.965	0.704	0.70237	0.99076
RegionR5	-1.502	0.704	1.00000	1.00000
RegionR6	3.148	0.704	0.29620	0.88807
RegionR7	-0.685	0.704	1.00000	1.00000
RegionR8	-0.867	0.704	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.331	0.704	1.00000	1.00000
RegenerationR2	3.051	0.704	0.12782	0.55222
RegenerationR3	2.649	0.704	0.25962	0.69387
RegenerationR4	-0.82	0.704	0.77171	0.97700
RegenerationR5	3.834	0.704	0.12448	0.52732
RegenerationR6	1.429	0.704	0.23691	0.58431
RegenerationBL	2.249	0.704	0.20948	0.55245
RegenerationTP	0.26	0.704	1.00000	1.00000

Genes with expression patterns similar to MligTC455_28683

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_28683	19	0.4	Mlig455_044662, Mlig455_044720	Neo: - Age: Up-Down-Up	DHH	2	-	-	-	-	1.000	1.000	Mlig455_044662 {REF} {Length: 3721} {Pfam: Hint module [PF01079.22, score=137.3]; Hedgehog amino-terminal signalling domain [PF01085.20, score=74.1]} {Human: ENSG00000139549, DHH, desert hedgehog, [RH, Score=125, Expect=2e-31]} {Mouse: ENSMUSG00000023000, Dhh, desert hedgehog, [RH, Score=129, Expect=8e-33]} {Dmel: FBgn0004644, hh, hedgehog, [RH, Score=111, Expect=2e-26]} {Celegans: WBGene00006947, wrt-1, Warthog protein 1 Warthog protein 1 N-product Warthog protein 1 C-product, [RH, Score=80.9, Expect=3e-16]} {RNA1509_40172} {RNA1310_26467, RNA1509_40172} {RNA1509_40172, RNA815_14382} Mlig455_044720 {REF} {Length: 3046} {Pfam: Hint module [PF01079.22, score=136.8]; Hedgehog amino-terminal signalling domain [PF01085.20, score=74.0]} {Human: ENSG00000139549, DHH, desert hedgehog, [RH, Score=125, Expect=3e-31]} {Mouse: ENSMUSG00000023000, Dhh, desert hedgehog, [RH, Score=128, Expect=1e-32]} {Dmel: FBgn0004644, hh, hedgehog, [RH, Score=112, Expect=1e-26]} {Celegans: WBGene00006947, wrt-1, Warthog protein 1 Warthog protein 1 N-product Warthog protein 1 C-product, [RH, Score=81.3, Expect=2e-16]} {RNA1509_40172} {RNA1310_26467} {RNA815_14382}
2.	MligTC455_51136	25	0.52	Mlig455_039786	Neo: - Age: -		0.963	-	-	-	-	0.963	-	Mlig455_039786 {REF} {Length: 1010} {Pfam: Glycolipid 2-alpha-mannosyltransferase [PF01793.18, score=88.1]} {RNA1509_55347} {RNA1310_24586} {RNA815_10520}
3.	MligTC455_38780	235	4.89	Mlig455_000360, Mlig455_056487	Neo: - Age: - Region-enriched R2: 3.921/0.00457	SGSM1	0.962	-	-	-	-	-	0.962	Mlig455_000360 {REF} {Length: 3015} {Pfam: Rab-GTPase-TBC domain [PF00566.20, score=53.6]; RUN domain [PF02759.21, score=45.8]} {Human: ENSG00000167037, SGSM1, small G protein signaling modulator 1, [Score=170, Expect=8e-43]} {Mouse: ENSMUSG00000042216, Sgsm1, small G protein signaling modulator 1, [Score=165, Expect=2e-41]} {Dmel: FBgn0052506, CG32506, [Score=150, Expect=1e-36]} {Celegans: WBGene00008018, tbc-8, TBC (Tre-2/Bub2/Cdc16) domain family, [Score=184, Expect=7e-48]} {Smed: dd_Smed_v6_12130_0_1, dd_Smed_v6_12130_0_1, [Score=196, Expect=1e-51]} {RNA1310_67163} {RNA815_24450} Mlig455_056487 {REF} {Length: 3063} {Pfam: Rab-GTPase-TBC domain [PF00566.20, score=52.8]; RUN domain [PF02759.21, score=45.7]} {Human: ENSG00000167037, SGSM1, small G protein signaling modulator 1, [Score=171, Expect=6e-43]} {Mouse: ENSMUSG00000042216, Sgsm1, small G protein signaling modulator 1, [Score=166, Expect=2e-41]} {Dmel: FBgn0052506, CG32506, [Score=150, Expect=9e-37]} {Celegans: WBGene00008018, tbc-8, TBC (Tre-2/Bub2/Cdc16) domain family, [Score=183, Expect=2e-47]} {Smed: dd_Smed_v6_12130_0_1, dd_Smed_v6_12130_0_1, [Score=193, Expect=2e-50]} {RNA1310_67163} {RNA815_24450}
4.	MligTC455_02921	22	0.46	Mlig455_002767	Neo: - Age: Down-Up-Down		0.956	-	-	-	-	-	0.956	Mlig455_002767 {REF} {Length: 880} {RNA1509_55156} {RNA1310_72044} {RNA815_28163}
5.	MligTC455_24484	13	0.28	Mlig455_029076	Neo: - Age: -	GIPC3	0.955	-	-	-	-	-	0.955	Mlig455_029076 {REF} {Length: 4488} {Human: ENSG00000179855, GIPC3, GIPC PDZ domain containing family member 3, [Score=57.0, Expect=1e-07]} {Smed: dd_Smed_v6_15433_0_1, dd_Smed_v6_15433_0_1, [Score=118, Expect=2e-27]} {RNA1509_37183} {RNA1310_7048.1} {RNA815_45630}