Data search
Results for MligTC455_28699
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_28699 | 121 | 2.51 | Mlig455_061352 | Neo: - Age: logFC(26M/2M)=0.525 |
CHERP | Mlig455_061352 {REF} {Length: 3849} {TRANSSPLICED} {Pfam: CID domain [PF04818.15, score=81.7]} {Human: ENSG00000085872, CHERP, calcium homeostasis endoplasmic reticulum protein, [RH, Score=140, Expect=2e-33]} {Mouse: ENSMUSG00000052488, Cherp, calcium homeostasis endoplasmic reticulum protein, [RH, Score=140, Expect=1e-33]} {Dmel: FBgn0261872, scaf6, SR-related CTD associated factor 6, [RH, Score=162, Expect=1e-40]} {Smed: dd_Smed_v6_4684_0_1, dd_Smed_v6_4684_0_1, [RH, Score=195, Expect=8e-52]} {RNA1509_37244} {RNA1310_7506} {RNA815_19825} |
Cumulative graph for MligTC455_28699
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -3.055 | 2.204 | 0.99972 | 1.00000 | |
| RegionR2 | -0.571 | 2.204 | 0.87920 | 1.00000 | |
| RegionR3 | 1.188 | 2.204 | 0.32682 | 0.86506 | |
| RegionR4 | 3.494 | 2.204 | 0.01996 | 0.10202 | |
| RegionR5 | 0.861 | 2.204 | 0.45644 | 0.81866 | |
| RegionR6 | 1.339 | 2.204 | 0.27411 | 0.86398 | |
| RegionR7 | 1.816 | 2.204 | 0.18204 | 0.78051 | |
| RegionR8 | -5.072 | 2.204 | 0.99980 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.398 | 2.204 | 1.00000 | 1.00000 | |
| RegenerationR2 | -0.42 | 2.204 | 0.66445 | 0.94327 | |
| RegenerationR3 | -0.66 | 2.204 | 0.50781 | 0.85990 | |
| RegenerationR4 | -0.973 | 2.204 | 0.38295 | 0.80316 | |
| RegenerationR5 | 1.089 | 2.204 | 0.27641 | 0.70543 | |
| RegenerationR6 | -0.148 | 2.204 | 0.87627 | 1.00000 | |
| RegenerationBL | 0.588 | 2.204 | 0.65680 | 0.99209 | |
| RegenerationTP | 2.41 | 2.204 | 0.26164 | 0.70940 |
Genes with expression patterns similar to MligTC455_28699
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_28699 | 121 | 2.51 | Mlig455_061352 | Neo: - Age: logFC(26M/2M)=0.525 |
CHERP | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_061352 {REF} {Length: 3849} {TRANSSPLICED} {Pfam: CID domain [PF04818.15, score=81.7]} {Human: ENSG00000085872, CHERP, calcium homeostasis endoplasmic reticulum protein, [RH, Score=140, Expect=2e-33]} {Mouse: ENSMUSG00000052488, Cherp, calcium homeostasis endoplasmic reticulum protein, [RH, Score=140, Expect=1e-33]} {Dmel: FBgn0261872, scaf6, SR-related CTD associated factor 6, [RH, Score=162, Expect=1e-40]} {Smed: dd_Smed_v6_4684_0_1, dd_Smed_v6_4684_0_1, [RH, Score=195, Expect=8e-52]} {RNA1509_37244} {RNA1310_7506} {RNA815_19825} |
| 2. | MligTC455_33770 | 164 | 3.43 | Mlig455_016901 | Neo: - Age: Down-Up-Down |
ZNF383 | 1.665 | 0.955 | - | - | - | 0.710 | - | Mlig455_016901 {REF} {Length: 1491} {TRANSSPLICED} {Pfam: Zinc-finger double domain [PF13465.8, score=139.1]; Zinc finger, C2H2 type [PF00096.28, score=71.1]; C2H2-type zinc finger [PF13894.8, score=61.8]; Zinc-finger of C2H2 type [PF12874.9, score=43.3]; C2H2-type zinc finger [PF13912.8, score=37.3]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=22.3]; AN1-like Zinc finger [PF01428.18, score=20.9]; Probable zinc-ribbon domain [PF13451.8, score=19.6]; KIAA1045 RING finger [PF16744.7, score=18.7]} {Human: ENSG00000188283, ZNF383, zinc finger protein 383, [Score=183, Expect=5e-54]; ENSG00000196705, ZNF431, zinc finger protein 431, [Score=180, Expect=7e-52]; ENSG00000197050, ZNF420, zinc finger protein 420, [Score=180, Expect=2e-51]; ENSG00000159917, ZNF235, zinc finger protein 235, [Score=179, Expect=1e-50]; ENSG00000018869, ZNF582, zinc finger protein 582, [Score=178, Expect=8e-52]; ENSG00000196867, ZFP28, ZFP28 zinc finger protein, [Score=178, Expect=5e-50]; ENSG00000267041, ZNF850, zinc finger protein 850, [Score=178, Expect=6e-50]; ENSG00000197360, ZNF98, zinc finger protein 98, [Score=177, Expect=9e-51]; ENSG00000278091, ZNF85, zinc finger protein 85, [Score=177, Expect=5e-51]; ENSG00000167637, ZNF283, zinc finger protein 283, [Score=177, Expect=3e-50]; ENSG00000188171, ZNF626, zinc finger protein 626, [Score=177, Expect=3e-51]; ENSG00000105750, ZNF85, zinc finger protein 85, [Score=177, Expect=6e-51]; ENSG00000160352, ZNF714, zinc finger protein 714, [Score=176, Expect=1e-50]; ENSG00000136866, ZFP37, ZFP37 zinc finger protein, [Score=176, Expect=3e-50]; ENSG00000176371, ZSCAN2, zinc finger and SCAN domain containing 2, [Score=176, Expect=4e-50]; ENSG00000196081, ZNF724, zinc finger protein 724, [Score=176, Expect=4e-50]; ENSG00000185869, ZNF829, zinc finger protein 829, [Score=175, Expect=4e-51]; ENSG00000274349, ZNF658, zinc finger protein 658, [Score=175, Expect=6e-49]; ENSG00000283201, AC092329.3, novel protein, [Score=175, Expect=1e-50]; ENSG00000213967, ZNF726, zinc finger protein 726, [Score=175, Expect=6e-50]; ENSG00000180479, ZNF571, zinc finger protein 571, [Score=175, Expect=4e-50]; ENSG00000197016, ZNF470, zinc finger protein 470, [Score=175, Expect=2e-49]; ENSG00000204920, ZNF155, zinc finger protein 155, [Score=174, Expect=9e-50]; ENSG00000168661, ZNF30, zinc finger protein 30, [Score=174, Expect=2e-49]; ENSG00000159915, ZNF233, zinc finger protein 233, [Score=174, Expect=2e-49]; ENSG00000251247, ZNF345, zinc finger protein 345, [Score=174, Expect=2e-50]; ENSG00000196172, ZNF681, zinc finger protein 681, [Score=174, Expect=2e-49]} {Mouse: ENSMUSG00000087598, Zfp111, zinc finger protein 111, [Score=184, Expect=8e-53]; ENSMUSG00000072623, Zfp9, zinc finger protein 9, [Score=179, Expect=7e-53]; ENSMUSG00000058402, Zfp420, zinc finger protein 420, [Score=179, Expect=7e-52]; ENSMUSG00000099689, Zfp383, zinc finger protein 383, [Score=179, Expect=1e-52]; ENSMUSG00000055305, Zfp93, zinc finger protein 93, [Score=179, Expect=1e-51]; ENSMUSG00000011427, Zfp790, zinc finger protein 790, [Score=177, Expect=6e-50]; ENSMUSG00000047603, Zfp235, zinc finger protein 235, [Score=177, Expect=2e-50]; ENSMUSG00000068962, Zfp114, zinc finger protein 114, [Score=176, Expect=1e-50]} {Dmel: FBgn0051632, sens-2, senseless-2, [Score=153, Expect=8e-42]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [Score=131, Expect=5e-36]} {Smed: dd_Smed_v6_14824_0_1, dd_Smed_v6_14824_0_1, [Score=153, Expect=3e-44]} {RNA1509_45680} {RNA1310_53364} {RNA815_2544.1} |
| 3. | MligTC455_48601 | 72 | 1.5 | Mlig455_042044 | Neo: - Age: - |
SLC35E3 | 0.968 | - | - | - | - | - | 0.968 | Mlig455_042044 {REF} {Length: 1777} {TRANSSPLICED} {Pfam: Triose-phosphate Transporter family [PF03151.18, score=65.8]; EamA-like transporter family [PF00892.22, score=31.7]; UAA transporter family [PF08449.13, score=23.4]} {Human: ENSG00000175782, SLC35E3, solute carrier family 35 member E3, [RH, Score=293, Expect=2e-98]} {Mouse: ENSMUSG00000060181, Slc35e3, solute carrier family 35, member E3, [RH, Score=289, Expect=6e-97]} {RNA1509_18211} {RNA1310_8738.1, RNA1509_18211} {RNA1509_18211, RNA815_11669} |
| 4. | MligTC455_37754 | 324 | 6.74 | Mlig455_009062 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.203 |
ZNF235 | 0.964 | - | - | - | - | - | 0.964 | Mlig455_009062 {REF} {Length: 3407} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=101.7]; C2H2-type zinc finger [PF13894.8, score=95.2]; Zinc-finger double domain [PF13465.8, score=73.4]; C2H2-type zinc finger [PF13912.8, score=35.5]; Zinc-finger of C2H2 type [PF12874.9, score=34.6]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=26.3]} {Human: ENSG00000159917, ZNF235, zinc finger protein 235, [Score=158, Expect=2e-40]; ENSG00000269067, ZNF728, zinc finger protein 728, [Score=158, Expect=1e-40]; ENSG00000062370, ZNF112, zinc finger protein 112, [Score=158, Expect=4e-40]; ENSG00000184635, ZNF93, zinc finger protein 93, [Score=156, Expect=3e-40]; ENSG00000197013, ZNF429, zinc finger protein 429, [Score=156, Expect=9e-40]; ENSG00000197016, ZNF470, zinc finger protein 470, [Score=155, Expect=2e-39]; ENSG00000196081, ZNF724, zinc finger protein 724, [Score=155, Expect=1e-39]; ENSG00000196150, ZNF250, zinc finger protein 250, [Score=154, Expect=1e-39]; ENSG00000197360, ZNF98, zinc finger protein 98, [Score=154, Expect=1e-39]; ENSG00000268696, ZNF723, zinc finger protein 723, [Score=153, Expect=2e-39]; ENSG00000168661, ZNF30, zinc finger protein 30, [Score=151, Expect=2e-38]; ENSG00000181450, ZNF678, zinc finger protein 678, [Score=151, Expect=1e-38]; ENSG00000127081, ZNF484, zinc finger protein 484, [Score=151, Expect=1e-37]; ENSG00000196152, ZNF79, zinc finger protein 79, [Score=151, Expect=6e-39]} {Mouse: ENSMUSG00000055305, Zfp93, zinc finger protein 93, [Score=160, Expect=2e-41]; ENSMUSG00000046185, Zfp84, zinc finger protein 84, [Score=157, Expect=6e-41]; ENSMUSG00000047603, Zfp235, zinc finger protein 235, [Score=157, Expect=2e-40]; ENSMUSG00000052675, Zfp112, zinc finger protein 112, [Score=155, Expect=4e-39]; ENSMUSG00000054967, Zfp647, zinc finger protein 647, [Score=155, Expect=4e-40]; ENSMUSG00000068962, Zfp114, zinc finger protein 114, [Score=154, Expect=9e-40]; ENSMUSG00000087598, Zfp111, zinc finger protein 111, [Score=154, Expect=4e-39]; ENSMUSG00000074165, Zfp788, zinc finger protein 788, [Score=152, Expect=3e-38]; ENSMUSG00000012640, Zfp715, zinc finger protein 715, [Score=152, Expect=4e-38]; ENSMUSG00000062743, Zfp677, zinc finger protein 677, [Score=152, Expect=1e-38]} {Dmel: FBgn0032295, CG12299, [Score=153, Expect=8e-39]} {Celegans: WBGene00012639, fezf-1, FEZ Family zinc finger protein, [Score=95.1, Expect=4e-22]} {Smed: dd_Smed_v6_19859_0_1, dd_Smed_v6_19859_0_1, [Score=95.5, Expect=7e-21]} {RNA1509_17549, RNA1509_48767} {RNA1310_3673.1, RNA1509_48767} {RNA1509_48767, RNA815_927.1} |
Berezikov Lab - 2020-2021 © ERIBA