TomoSeq data search

Data search

Results for MligTC455_28713

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_28713

8686

180.95

Mlig455_016595, Mlig455_022467

Neo: -

Age: Up-Up-Up, logFC(26M/2M)=1.195

RPS26

Mlig455_016595 {REF} {Length: 612} {TRANSSPLICED} {Pfam: Ribosomal protein S26e [PF01283.21, score=173.4]} {Human: ENSG00000197728, RPS26, ribosomal protein S26, [RH, Score=171, Expect=1e-55]} {Mouse: ENSMUSG00000025362, Rps26, ribosomal protein S26, [RH, Score=171, Expect=8e-56]} {Dmel: FBgn0261597, RpS26, Ribosomal protein S26, [RH, Score=155, Expect=1e-49]} {Celegans: WBGene00004495, rps-26, 40S ribosomal protein S26, [RH, Score=166, Expect=5e-54]} {Smed: dd_Smed_v6_222_0_1, dd_Smed_v6_222_0_1, [RH, Score=161, Expect=2e-52]} {RNA1509_22068, RNA1509_3543, RNA1509_5442} {RNA1310_58175, RNA1509_3543, RNA1509_5442} {RNA1509_3543, RNA1509_5442, RNA815_31571}

Mlig455_022467 {REF} {Length: 798} {Pfam: WSC domain [PF01822.21, score=38.1]; PAN domain [PF00024.28, score=22.5]} {Mouse: ENSMUSG00000040680, Kremen2, kringle containing transmembrane protein 2, [Score=46.6, Expect=1e-05]} {RNA1310_89673} {RNA815_64813}

Cumulative graph for MligTC455_28713

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.665	7.632	0.11560	0.70292
RegionR2	-0.652	7.632	0.03097	0.19945
RegionR3	0.269	7.632	0.28433	0.82720
RegionR4	0.82	7.632	0.00304	0.02473
RegionR5	0.54	7.632	0.02455	0.11227
RegionR6	0.213	7.632	0.39650	0.96943
RegionR7	0.168	7.632	0.50491	1.00000
RegionR8	-0.694	7.632	0.02269	0.29333

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.421	7.632	0.01944	0.55522
RegenerationR2	-0.43	7.632	0.17703	0.61764
RegenerationR3	-0.414	7.632	0.20201	0.63744
RegenerationR4	-0.498	7.632	0.13513	0.55461
RegenerationR5	-0.796	7.632	0.01277	0.19818
RegenerationR6	-0.451	7.632	0.16528	0.49547
RegenerationBL	-0.508	7.632	0.08767	0.34700
RegenerationTP	-0.518	7.632	0.10941	0.50954

Genes with expression patterns similar to MligTC455_28713

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_28713	8686	180.95	Mlig455_016595, Mlig455_022467	Neo: - Age: Up-Up-Up, logFC(26M/2M)=1.195	RPS26	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_016595 {REF} {Length: 612} {TRANSSPLICED} {Pfam: Ribosomal protein S26e [PF01283.21, score=173.4]} {Human: ENSG00000197728, RPS26, ribosomal protein S26, [RH, Score=171, Expect=1e-55]} {Mouse: ENSMUSG00000025362, Rps26, ribosomal protein S26, [RH, Score=171, Expect=8e-56]} {Dmel: FBgn0261597, RpS26, Ribosomal protein S26, [RH, Score=155, Expect=1e-49]} {Celegans: WBGene00004495, rps-26, 40S ribosomal protein S26, [RH, Score=166, Expect=5e-54]} {Smed: dd_Smed_v6_222_0_1, dd_Smed_v6_222_0_1, [RH, Score=161, Expect=2e-52]} {RNA1509_22068, RNA1509_3543, RNA1509_5442} {RNA1310_58175, RNA1509_3543, RNA1509_5442} {RNA1509_3543, RNA1509_5442, RNA815_31571} Mlig455_022467 {REF} {Length: 798} {Pfam: WSC domain [PF01822.21, score=38.1]; PAN domain [PF00024.28, score=22.5]} {Mouse: ENSMUSG00000040680, Kremen2, kringle containing transmembrane protein 2, [Score=46.6, Expect=1e-05]} {RNA1310_89673} {RNA815_64813}
2.	MligTC455_28691	8662	180.45	Mlig455_008901	Neo: - Age: logFC(26M/2M)=-0.302	RPS26	5.998	1.000	1.000	0.999	1.000	0.999	1.000	Mlig455_008901 {REF} {Length: 616} {TRANSSPLICED} {Pfam: Ribosomal protein S26e [PF01283.21, score=173.4]} {Human: ENSG00000197728, RPS26, ribosomal protein S26, [RH, Score=171, Expect=1e-55]} {Mouse: ENSMUSG00000025362, Rps26, ribosomal protein S26, [RH, Score=171, Expect=8e-56]} {Dmel: FBgn0261597, RpS26, Ribosomal protein S26, [RH, Score=155, Expect=1e-49]} {Celegans: WBGene00004495, rps-26, 40S ribosomal protein S26, [RH, Score=166, Expect=5e-54]} {Smed: dd_Smed_v6_222_0_1, dd_Smed_v6_222_0_1, [RH, Score=161, Expect=2e-52]} {RNA1509_1146} {RNA1310_58175} {RNA815_31571}
3.	MligTC455_35714	1482	30.87	Mlig455_023783	Neo: Int S/G2/M Age: -		2.57	-	-	-	0.967	0.745	0.858	Mlig455_023783 {REF} {Length: 437} {RNA1509_30054} {RNA1310_21276} {RNA815_32481}
4.	MligTC455_39789	7445	155.1	Mlig455_028826, Mlig455_036262	Neo: - Age: logFC(26M/2M)=-0.843	GLRA2, RPL35	2.563	0.755	-	0.854	-	-	0.954	Mlig455_028826 {REF} {Length: 1888} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=140.2]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=101.0]} {Human: ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=263, Expect=1e-81]; ENSG00000188828, GLRA4, glycine receptor alpha 4, [Score=261, Expect=3e-81]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=259, Expect=4e-80]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=256, Expect=3e-79]} {Mouse: ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=266, Expect=5e-83]; ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=262, Expect=1e-81]; ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=258, Expect=1e-79]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [Score=256, Expect=5e-79]} {Dmel: FBgn0030707, CG8916, [Score=236, Expect=3e-71]} {Celegans: WBGene00001591, glc-1, Glutamate-gated chloride channel alpha, [Score=238, Expect=1e-72]} {Smed: dd_Smed_v6_11342_0_1, dd_Smed_v6_11342_0_1, [Score=275, Expect=5e-87]} {RNA1310_64518} Mlig455_036262 {REF} {Length: 507} {TRANSSPLICED} {Pfam: Ribosomal L29 protein [PF00831.25, score=63.9]} {Human: ENSG00000136942, RPL35, ribosomal protein L35, [RH, Score=140, Expect=6e-44]} {Mouse: ENSMUSG00000078193, Gm2000, predicted gene 2000, [RH, Score=141, Expect=2e-44]; ENSMUSG00000062997, Rpl35, ribosomal protein L35, [RH, Score=141, Expect=2e-44]} {Dmel: FBgn0029785, RpL35, Ribosomal protein L35, [RH, Score=138, Expect=3e-43]} {Celegans: WBGene00004449, rpl-35, 60S ribosomal protein L35, [RH, Score=120, Expect=3e-36]} {Smed: dd_Smed_v6_168_0_1, dd_Smed_v6_168_0_1, [RH, Score=104, Expect=5e-30]} {RNA1509_9000} {RNA1310_68306.2} {RNA815_35452}
5.	MligTC455_39790	22547	469.74	Mlig455_054533, Mlig455_055385, Mlig455_055459	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.315	RPL35	2.555	0.760	-	0.840	-	-	0.955	Mlig455_054533 {REF} {Length: 508} {TRANSSPLICED} {Pfam: Ribosomal L29 protein [PF00831.25, score=63.9]} {Human: ENSG00000136942, RPL35, ribosomal protein L35, [RH, Score=144, Expect=2e-45]} {Mouse: ENSMUSG00000078193, Gm2000, predicted gene 2000, [RH, Score=145, Expect=1e-45]; ENSMUSG00000062997, Rpl35, ribosomal protein L35, [RH, Score=145, Expect=1e-45]} {Dmel: FBgn0029785, RpL35, Ribosomal protein L35, [RH, Score=137, Expect=7e-43]} {Celegans: WBGene00004449, rpl-35, 60S ribosomal protein L35, [RH, Score=120, Expect=3e-36]} {Smed: dd_Smed_v6_168_0_1, dd_Smed_v6_168_0_1, [RH, Score=104, Expect=6e-30]} {RNA1509_2855, RNA1509_41554, RNA1509_5741, RNA1509_7424, RNA1509_9000} {RNA1310_68306.2, RNA1509_2855, RNA1509_41554, RNA1509_5741, RNA1509_7424} {RNA1509_2855, RNA1509_41554, RNA1509_5741, RNA1509_7424, RNA815_35452} Mlig455_055385 {REF} {Length: 508} {TRANSSPLICED} {Pfam: Ribosomal L29 protein [PF00831.25, score=63.9]} {Human: ENSG00000136942, RPL35, ribosomal protein L35, [RH, Score=140, Expect=6e-44]} {Mouse: ENSMUSG00000078193, Gm2000, predicted gene 2000, [RH, Score=141, Expect=2e-44]; ENSMUSG00000062997, Rpl35, ribosomal protein L35, [RH, Score=141, Expect=2e-44]} {Dmel: FBgn0029785, RpL35, Ribosomal protein L35, [RH, Score=138, Expect=3e-43]} {Celegans: WBGene00004449, rpl-35, 60S ribosomal protein L35, [RH, Score=120, Expect=3e-36]} {Smed: dd_Smed_v6_168_0_1, dd_Smed_v6_168_0_1, [RH, Score=104, Expect=5e-30]} {RNA1509_1154, RNA1509_9000} {RNA1310_68306.2, RNA1509_1154, RNA1509_9000} {RNA1509_1154, RNA1509_9000, RNA815_35452} Mlig455_055459 {REF} {Length: 508} {TRANSSPLICED} {Pfam: Ribosomal L29 protein [PF00831.25, score=63.9]} {Human: ENSG00000136942, RPL35, ribosomal protein L35, [RH, Score=144, Expect=2e-45]} {Mouse: ENSMUSG00000078193, Gm2000, predicted gene 2000, [RH, Score=145, Expect=1e-45]; ENSMUSG00000062997, Rpl35, ribosomal protein L35, [RH, Score=145, Expect=1e-45]} {Dmel: FBgn0029785, RpL35, Ribosomal protein L35, [RH, Score=137, Expect=7e-43]} {Celegans: WBGene00004449, rpl-35, 60S ribosomal protein L35, [RH, Score=120, Expect=3e-36]} {Smed: dd_Smed_v6_168_0_1, dd_Smed_v6_168_0_1, [RH, Score=104, Expect=6e-30]} {RNA1509_14871, RNA1509_9000} {RNA1310_68306.2, RNA1509_14871} {RNA1509_14871, RNA815_35452}
6.	MligTC455_46935	2445	50.94	Mlig455_011475	Neo: - Age: Down-Down-Up		2.554	-	-	-	0.787	0.800	0.967	Mlig455_011475 {REF} {Length: 796} {TRANSSPLICED} {Pfam: Ribosome biogenesis protein Nop16 [PF09420.12, score=71.2]} {RNA1509_26015} {RNA1310_27524.1} {RNA815_18128}
7.	MligTC455_33576	1023	21.32	Mlig455_027113	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.574 Region-enriched R4: 3.354/0.00000 Region-enriched R5: 1.755/0.00109	RPL18	2.509	-	-	0.809	0.952	-	0.748	Mlig455_027113 {REF} {Length: 746} {TRANSSPLICED} {Pfam: Ribosomal protein 60S L18 and 50S L18e [PF17135.6, score=275.3]} {Human: ENSG00000063177, RPL18, ribosomal protein L18, [RH, Score=231, Expect=7e-78]} {Mouse: ENSMUSG00000059070, Rpl18, ribosomal protein L18, [RH, Score=213, Expect=1e-70]} {Dmel: FBgn0035753, RpL18, Ribosomal protein L18, [RH, Score=251, Expect=9e-86]} {Celegans: WBGene00004430, rpl-18, 60S ribosomal protein L18, [RH, Score=233, Expect=9e-79]} {Smed: dd_Smed_v6_128_0_1, dd_Smed_v6_128_0_1, [RH, Score=201, Expect=1e-66]} {RNA1509_684} {RNA1310_50387, RNA1509_684} {RNA1509_684, RNA815_23125.1}
8.	MligTC455_46936	5230	108.96	Mlig455_011564, Mlig455_050028	Neo: - Age: Down-Up-Down, logFC(26M/2M)=2.691		2.498	-	-	-	0.773	0.765	0.960	Mlig455_011564 {REF} {Length: 889} {TRANSSPLICED} {Pfam: Ribosome biogenesis protein Nop16 [PF09420.12, score=70.4]} {RNA1509_26015} {RNA1310_27524.2} {RNA815_18128} Mlig455_050028 {REF} {Length: 889} {TRANSSPLICED} {Pfam: Ribosome biogenesis protein Nop16 [PF09420.12, score=70.4]} {RNA1509_14554, RNA1509_22041, RNA1509_26015} {RNA1310_27524.2, RNA1509_14554, RNA1509_22041, RNA1509_26015} {RNA1509_14554, RNA1509_22041, RNA1509_26015, RNA815_18128}
9.	MligTC455_50952	6034	125.7	Mlig455_010093	Neo: - Age: logFC(26M/2M)=0.718 Region-enriched R5: 1.058/0.00005	SSR2	1.79	-	-	-	-	0.966	0.824	Mlig455_010093 {REF} {Length: 1314} {TRANSSPLICED} {Pfam: Translocon-associated protein beta (TRAPB) [PF05753.16, score=172.0]} {Human: ENSG00000163479, SSR2, signal sequence receptor subunit 2, [RH, Score=164, Expect=4e-51]} {Mouse: ENSMUSG00000041355, Ssr2, signal sequence receptor, beta, [RH, Score=159, Expect=2e-49]} {Celegans: WBGene00020216, trap-2, Translocon-associated protein subunit beta, [Score=90.5, Expect=9e-23]} {Smed: dd_Smed_v6_1759_0_1, dd_Smed_v6_1759_0_1, [Score=153, Expect=3e-47]} {RNA1509_10138, RNA1509_21200, RNA1509_2868, RNA1509_5913, RNA1509_7629} {RNA1310_18208.1, RNA1509_10138, RNA1509_21200, RNA1509_2868, RNA1509_5913, RNA1509_7629} {RNA1509_10138, RNA1509_21200, RNA1509_2868, RNA1509_5913, RNA1509_7629, RNA815_11531}
10.	MligTC455_53560	7500	156.25	Mlig455_006919, Mlig455_017935	Neo: Int S/G2/M Age: Down-Up-Up Region-enriched R4: 1.200/0.00022	TIMM8A	1.691	-	-	-	-	0.732	0.959	Mlig455_006919 {REF} {Length: 563} {TRANSSPLICED} {Pfam: Tim10/DDP family zinc finger [PF02953.17, score=64.9]} {Human: ENSG00000126953, TIMM8A, translocase of inner mitochondrial membrane 8A, [RH, Score=52.4, Expect=2e-09]} {Mouse: ENSMUSG00000048007, Timm8a1, translocase of inner mitochondrial membrane 8A1, [RH, Score=52.4, Expect=1e-09]; ENSMUSG00000071229, Timm8a2, translocase of inner mitochondrial membrane 8A2, [RH, Score=52.0, Expect=2e-09]} {RNA1509_10787, RNA1509_20811, RNA1509_24476, RNA1509_46601, RNA1509_57054, RNA1509_7677} {RNA1310_36867, RNA1509_10787, RNA1509_20811, RNA1509_24476, RNA1509_46601, RNA1509_57054, RNA1509_7677} {RNA1509_10787, RNA1509_20811, RNA1509_24476, RNA1509_46601, RNA1509_57054, RNA1509_7677, RNA815_30004} Mlig455_017935 {REF} {Length: 497} {TRANSSPLICED} {Pfam: Tim10/DDP family zinc finger [PF02953.17, score=58.7]} {Human: ENSG00000126953, TIMM8A, translocase of inner mitochondrial membrane 8A, [Score=48.5, Expect=4e-08]} {Mouse: ENSMUSG00000071229, Timm8a2, translocase of inner mitochondrial membrane 8A2, [Score=48.5, Expect=3e-08]; ENSMUSG00000048007, Timm8a1, translocase of inner mitochondrial membrane 8A1, [Score=48.5, Expect=3e-08]} {RNA1509_57054} {RNA1310_61445} {RNA815_30004}
11.	MligTC455_48131	2259	47.06	Mlig455_063177	Neo: Neoblast Age: Down-Up-Up Region-enriched R4: 1.878/0.00259 Region-enriched R5: 1.254/0.01532		0.964	-	-	-	0.964	-	-	Mlig455_063177 {REF} {Length: 1025} {TRANSSPLICED} {Pfam: Growth arrest and DNA-damage-inducible proteins-interacting protein 1 [PF10147.11, score=83.6]} {Smed: dd_Smed_v6_2807_0_1, dd_Smed_v6_2807_0_1, [RH, Score=63.5, Expect=1e-11]} {RNA1509_23044, RNA1509_44593, RNA1509_53318, RNA1509_6774} {RNA1310_26408.1, RNA1509_23044, RNA1509_44593, RNA1509_53318, RNA1509_6774} {RNA1509_23044, RNA1509_44593, RNA1509_53318, RNA1509_6774, RNA815_16295}
12.	MligTC455_36313	14163	295.07	Mlig455_001189, Mlig455_001345	Neo: Neoblast Age: Down-Up-Up, logFC(26M/2M)=0.311	RPL29	0.962	-	-	-	-	-	0.962	Mlig455_001189 {REF} {Length: 352} {TRANSSPLICED} {Pfam: Ribosomal L29e protein family [PF01779.19, score=85.0]} {Human: ENSG00000162244, RPL29, ribosomal protein L29, [RH, Score=84.0, Expect=5e-22]} {Mouse: ENSMUSG00000078240, Gm3550, predicted gene 3550, [RH, Score=93.6, Expect=5e-26]} {Dmel: FBgn0016726, RpL29, Ribosomal protein L29, [RH, Score=66.6, Expect=1e-16]} {Celegans: WBGene00004443, rpl-29, 60S ribosomal protein L29, [RH, Score=75.9, Expect=2e-20]} {Smed: dd_Smed_v6_481_0_1, dd_Smed_v6_481_0_1, [RH, Score=90.1, Expect=3e-26]} {RNA1509_9160} {RNA1310_98661, RNA1509_9160} {RNA1509_9160, RNA815_49782.2} Mlig455_001345 {REF} {Length: 353} {TRANSSPLICED} {Pfam: Ribosomal L29e protein family [PF01779.19, score=85.0]} {Human: ENSG00000162244, RPL29, ribosomal protein L29, [RH, Score=84.0, Expect=5e-22]} {Mouse: ENSMUSG00000078240, Gm3550, predicted gene 3550, [RH, Score=93.6, Expect=5e-26]} {Dmel: FBgn0016726, RpL29, Ribosomal protein L29, [RH, Score=66.6, Expect=1e-16]} {Celegans: WBGene00004443, rpl-29, 60S ribosomal protein L29, [RH, Score=75.9, Expect=2e-20]} {Smed: dd_Smed_v6_481_0_1, dd_Smed_v6_481_0_1, [RH, Score=90.1, Expect=3e-26]} {RNA1509_9160} {RNA1310_98661} {RNA815_49782.2}

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