Data search
Results for MligTC455_28728
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_28728 | 398 | 8.30 | Mlig455_024142 | Neo: - Age: Down-Up-Down Region-enriched R5: 1.783/0.01815 |
Mlig455_024142 {REF} {Length: 1976} {TRANSSPLICED} {RNA1509_38270, RNA1509_8784} {RNA1310_31217, RNA1509_38270, RNA1509_8784} {RNA1509_38270, RNA1509_8784, RNA815_11586} |
Cumulative graph for MligTC455_28728
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -7.037 | 3.534 | 0.04040 | 0.48841 | |
| RegionR2 | 0.713 | 3.534 | 0.44473 | 0.83329 | |
| RegionR3 | 1.086 | 3.534 | 0.14993 | 0.65652 | |
| RegionR4 | 1.798 | 3.534 | 0.01370 | 0.07714 | |
| RegionR5 | 1.783 | 3.534 | 0.00211 | 0.01815 | |
| RegionR6 | 1.904 | 3.534 | 0.00178 | 0.05631 | |
| RegionR7 | 0.873 | 3.534 | 0.34428 | 0.98148 | |
| RegionR8 | -1.119 | 3.534 | 0.99019 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 5.968 | 3.534 | 0.20877 | 0.94839 | |
| RegenerationR2 | -0.026 | 3.534 | 0.95081 | 1.00000 | |
| RegenerationR3 | 0.068 | 3.534 | 0.88742 | 1.00000 | |
| RegenerationR4 | -0.584 | 3.534 | 0.24688 | 0.69494 | |
| RegenerationR5 | -0.448 | 3.534 | 0.29305 | 0.72096 | |
| RegenerationR6 | -0.845 | 3.534 | 0.07509 | 0.34260 | |
| RegenerationBL | 0.033 | 3.534 | 0.95958 | 1.00000 | |
| RegenerationTP | 0.229 | 3.534 | 0.77298 | 1.00000 |
Genes with expression patterns similar to MligTC455_28728
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_28728 | 398 | 8.3 | Mlig455_024142 | Neo: - Age: Down-Up-Down Region-enriched R5: 1.783/0.01815 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_024142 {REF} {Length: 1976} {TRANSSPLICED} {RNA1509_38270, RNA1509_8784} {RNA1310_31217, RNA1509_38270, RNA1509_8784} {RNA1509_38270, RNA1509_8784, RNA815_11586} | |
| 2. | MligTC455_36308 | 1628 | 33.92 | Mlig455_007469 | Neo: - Age: - Region-enriched R4: 1.426/0.04698 |
0.967 | - | - | - | - | - | 0.967 | Mlig455_007469 {REF} {Length: 1351} {TRANSSPLICED} {Pfam: Ubiquinol-cytochrome C reductase complex, 6.4kD protein [PF08997.12, score=42.9]} {Mouse: ENSMUSG00000020163, Uqcr11, ubiquinol-cytochrome c reductase, complex III subunit XI, [Score=39.7, Expect=1e-05]} {Smed: dd_Smed_v6_782_0_1, dd_Smed_v6_782_0_1, [RH, Score=45.4, Expect=2e-08]} {RNA1509_11286} {RNA1310_61690} {RNA815_31570} | |
| 3. | MligTC455_32136 | 830 | 17.29 | Mlig455_067836 | Neo: - Age: - |
ITGA6 | 0.963 | - | - | - | - | - | 0.963 | Mlig455_067836 {REF} {Length: 6426} {Pfam: FG-GAP repeat [PF01839.25, score=62.8]; FG-GAP-like repeat [PF13517.8, score=35.4]} {Human: ENSG00000091409, ITGA6, integrin subunit alpha 6, [Score=96.3, Expect=2e-19]} {Mouse: ENSMUSG00000034664, Itga2b, integrin alpha 2b, [Score=96.7, Expect=1e-19]} {Dmel: FBgn0034880, ItgaPS5, Integrin alphaPS5 subunit, [Score=84.0, Expect=6e-16]} {Celegans: WBGene00002081, ina-1, Integrin alpha ina-1, [Score=80.5, Expect=6e-15]} {Smed: dd_Smed_v6_8943_0_1, dd_Smed_v6_8943_0_1, [Score=77.4, Expect=4e-14]} {RNA1509_11704} {RNA1310_2037.1} {RNA815_3044} |
| 4. | MligTC455_44226 | 2103 | 43.81 | Mlig455_015182, Mlig455_027144 | Neo: - Age: Up-Up-Down |
CORO1B | 0.961 | - | - | - | - | - | 0.961 | Mlig455_015182 {REF} {Length: 3501} {Pfam: Initiation control protein YabA [PF06156.15, score=21.1]; Cell division protein ZapB [PF06005.14, score=20.2]} {RNA1509_15548} {RNA1310_30364} {RNA815_20610.1} Mlig455_027144 {REF} {Length: 3431} {Pfam: Domain of unknown function (DUF1899) [PF08953.13, score=110.7]; Type of WD40 repeat [PF16300.7, score=70.7]; WD domain, G-beta repeat [PF00400.34, score=24.7]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=22.4]} {Human: ENSG00000172725, CORO1B, coronin 1B, [RH, Score=492, Expect=7e-170]; ENSG00000167549, CORO6, coronin 6, [RH, Score=485, Expect=2e-167]; ENSG00000110880, CORO1C, coronin 1C, [RH, Score=474, Expect=6e-163]} {Mouse: ENSMUSG00000024835, Coro1b, coronin, actin binding protein 1B, [RH, Score=493, Expect=3e-170]; ENSMUSG00000097771, Coro1b, coronin, actin binding protein 1B, [RH, Score=493, Expect=3e-170]; ENSMUSG00000020836, Coro6, coronin 6, [RH, Score=480, Expect=2e-165]; ENSMUSG00000004530, Coro1c, coronin, actin binding protein 1C, [RH, Score=472, Expect=2e-162]} {Dmel: FBgn0265935, coro, [RH, Score=481, Expect=3e-165]} {Celegans: WBGene00000768, cor-1, Coronin-like protein cor-1, [RH, Score=396, Expect=6e-132]} {Smed: dd_Smed_v6_448_0_1, dd_Smed_v6_448_0_1, [RH, Score=523, Expect=0.0]} {RNA1509_15548} {RNA1310_30364} {RNA815_26523} |
| 5. | MligTC455_25024 | 713 | 14.85 | Mlig455_043194 | Neo: - Age: Up-Down-Up |
TSC2 | 0.959 | - | - | - | - | - | 0.959 | Mlig455_043194 {REF} {Length: 5800} {Pfam: Domain of unknown function (DUF3384) [PF11864.10, score=59.5]; Rap/ran-GAP [PF02145.17, score=46.1]; Tuberin [PF03542.18, score=38.1]} {Human: ENSG00000103197, TSC2, TSC complex subunit 2, [Score=95.1, Expect=6e-19]} {Mouse: ENSMUSG00000002496, Tsc2, tuberous sclerosis 2, [Score=87.8, Expect=8e-17]} {Dmel: FBgn0005198, gig, gigas, [RH, Score=90.5, Expect=9e-18]} {Celegans: WBGene00018734, F53A10.2, Rap1GAP, [Score=59.7, Expect=1e-08]} {RNA1509_55366} {RNA1310_1230.2} {RNA815_7005} |
| 6. | MligTC455_44225 | 1069 | 22.28 | Mlig455_015063 | Neo: - Age: Up-Up-Down |
CORO1B | 0.955 | - | - | - | - | - | 0.955 | Mlig455_015063 {REF} {Length: 3367} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF1899) [PF08953.13, score=110.7]; Type of WD40 repeat [PF16300.7, score=70.7]; WD domain, G-beta repeat [PF00400.34, score=24.3]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=20.7]; Initiation control protein YabA [PF06156.15, score=19.4]} {Human: ENSG00000172725, CORO1B, coronin 1B, [RH, Score=493, Expect=5e-170]; ENSG00000167549, CORO6, coronin 6, [RH, Score=486, Expect=2e-167]; ENSG00000110880, CORO1C, coronin 1C, [RH, Score=474, Expect=5e-163]} {Mouse: ENSMUSG00000024835, Coro1b, coronin, actin binding protein 1B, [RH, Score=493, Expect=2e-170]; ENSMUSG00000097771, Coro1b, coronin, actin binding protein 1B, [RH, Score=493, Expect=2e-170]; ENSMUSG00000020836, Coro6, coronin 6, [RH, Score=480, Expect=2e-165]; ENSMUSG00000004530, Coro1c, coronin, actin binding protein 1C, [RH, Score=473, Expect=2e-162]} {Dmel: FBgn0265935, coro, [RH, Score=481, Expect=2e-165]} {Celegans: WBGene00000768, cor-1, Coronin-like protein cor-1, [RH, Score=397, Expect=2e-132]} {Smed: dd_Smed_v6_448_0_1, dd_Smed_v6_448_0_1, [RH, Score=525, Expect=0.0]} {RNA1509_39223} {RNA1310_30364} {RNA815_20610.1} |
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