TomoSeq data search

Data search

Results for MligTC455_28736

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_28736

54

1.12

Mlig455_032219

Neo: -

Age: logFC(26M/2M)=-0.438

ANKRD17

Mlig455_032219 {REF} {Length: 7163} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=489.4]; Ankyrin repeats (many copies) [PF13637.8, score=350.8]; Ankyrin repeat [PF13606.8, score=161.8]; Ankyrin repeats (many copies) [PF13857.8, score=120.3]; Ankyrin repeat [PF00023.32, score=115.9]; HEAT repeats [PF13646.8, score=77.8]; Mab-21 protein [PF03281.16, score=38.6]; Patatin phospholipase [PF12536.10, score=38.5]} {Human: ENSG00000132466, ANKRD17, ankyrin repeat domain 17, [Score=158, Expect=1e-37]} {Mouse: ENSMUSG00000055204, Ankrd17, ankyrin repeat domain 17, [Score=174, Expect=7e-43]} {Dmel: FBgn0016920, nompC, no mechanoreceptor potential C, [Score=117, Expect=9e-26]} {Celegans: WBGene00012124, T28D6.4, [Score=91.7, Expect=5e-18]} {Smed: dd_Smed_v6_5303_0_2, dd_Smed_v6_5303_0_2, [Score=167, Expect=2e-41]} {RNA1509_27730} {RNA1310_4721} {RNA815_2426.1}

Cumulative graph for MligTC455_28736

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.954	1.338	1.00000	1.00000
RegionR2	-0.249	1.338	0.99991	1.00000
RegionR3	0.636	1.338	0.99997	1.00000
RegionR4	0.248	1.338	0.99996	1.00000
RegionR5	0.677	1.338	0.99996	1.00000
RegionR6	0.071	1.338	0.99999	1.00000
RegionR7	-0.174	1.338	0.99999	1.00000
RegionR8	-0.255	1.338	0.99997	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.551	1.338	1.00000	1.00000
RegenerationR2	3.838	1.338	0.01388	0.19291
RegenerationR3	3.883	1.338	0.03382	0.32724
RegenerationR4	3.252	1.338	0.03813	0.31552
RegenerationR5	3.436	1.338	0.02762	0.28119
RegenerationR6	4.216	1.338	0.03383	0.23027
RegenerationBL	5.668	1.338	0.00398	0.05642
RegenerationTP	-0.378	1.338	0.99998	1.00000

Genes with expression patterns similar to MligTC455_28736

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_28736	54	1.12	Mlig455_032219	Neo: - Age: logFC(26M/2M)=-0.438	ANKRD17	3	-	-	-	1.000	1.000	1.000	Mlig455_032219 {REF} {Length: 7163} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=489.4]; Ankyrin repeats (many copies) [PF13637.8, score=350.8]; Ankyrin repeat [PF13606.8, score=161.8]; Ankyrin repeats (many copies) [PF13857.8, score=120.3]; Ankyrin repeat [PF00023.32, score=115.9]; HEAT repeats [PF13646.8, score=77.8]; Mab-21 protein [PF03281.16, score=38.6]; Patatin phospholipase [PF12536.10, score=38.5]} {Human: ENSG00000132466, ANKRD17, ankyrin repeat domain 17, [Score=158, Expect=1e-37]} {Mouse: ENSMUSG00000055204, Ankrd17, ankyrin repeat domain 17, [Score=174, Expect=7e-43]} {Dmel: FBgn0016920, nompC, no mechanoreceptor potential C, [Score=117, Expect=9e-26]} {Celegans: WBGene00012124, T28D6.4, [Score=91.7, Expect=5e-18]} {Smed: dd_Smed_v6_5303_0_2, dd_Smed_v6_5303_0_2, [Score=167, Expect=2e-41]} {RNA1509_27730} {RNA1310_4721} {RNA815_2426.1}
2.	MligTC455_21654	221	4.61	Mlig455_020914	Neo: - Age: logFC(26M/2M)=-0.339		1.787	-	-	-	-	0.835	0.952	Mlig455_020914 {REF} {Length: 2571} {Mouse: ENSMUSG00000041849, Card6, caspase recruitment domain family, member 6, [Score=56.6, Expect=8e-08]} {RNA1509_54821} {RNA1310_10560.1, RNA1509_54821} {RNA1509_54821, RNA815_15227}
3.	MligTC455_30496	506	10.54	Mlig455_026882	Neo: - Age: logFC(26M/2M)=0.358 Region-enriched R4: 2.152/0.01690	MYO6	1.781	-	-	-	0.952	0.829	-	Mlig455_026882 {REF} {Length: 5927} {TRANSSPLICED} {Pfam: Myosin head (motor domain) [PF00063.23, score=758.2]; Myosin VI cargo binding domain [PF16521.7, score=129.6]; Myosin N-terminal SH3-like domain [PF02736.21, score=30.1]} {Human: ENSG00000196586, MYO6, myosin VI, [Score=910, Expect=0.0]} {Mouse: ENSMUSG00000033577, Myo6, myosin VI, [Score=896, Expect=0.0]} {Dmel: FBgn0011225, jar, jaguar, [Score=881, Expect=0.0]} {Celegans: WBGene00004969, spe-15, [Score=775, Expect=0.0]} {Smed: dd_Smed_v6_4503_0_1, dd_Smed_v6_4503_0_1, [Score=844, Expect=0.0]} {RNA1509_1417} {RNA1310_883} {RNA815_546}
4.	MligTC455_54165	1439	29.97	Mlig455_007365, Mlig455_066708	Neo: - Age: -	ALG11	1.738	-	-	-	0.786	0.952	-	Mlig455_007365 {REF} {Length: 2922} {TRANSSPLICED} {Pfam: ALG11 mannosyltransferase N-terminus [PF15924.7, score=231.3]; Glycosyl transferases group 1 [PF00534.22, score=89.2]; Glycosyl transferases group 1 [PF13692.8, score=47.5]} {Human: ENSG00000253710, ALG11, ALG11, alpha-1,2-mannosyltransferase, [RH, Score=355, Expect=3e-117]} {Mouse: ENSMUSG00000063362, Alg11, asparagine-linked glycosylation 11 (alpha-1,2-mannosyltransferase), [RH, Score=346, Expect=4e-114]} {Dmel: FBgn0037108, CG11306, [RH, Score=347, Expect=1e-114]} {Celegans: WBGene00015162, algn-11, GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase, [RH, Score=281, Expect=1e-89]} {Smed: dd_Smed_v6_6817_0_1, dd_Smed_v6_6817_0_1, [RH, Score=308, Expect=5e-100]} {RNA1509_7550} {RNA1310_18644.1} {RNA815_15078} Mlig455_066708 {REF} {Length: 3570} {TRANSSPLICED} {Pfam: ALG11 mannosyltransferase N-terminus [PF15924.7, score=230.8]; Glycosyl transferases group 1 [PF00534.22, score=88.6]; Glycosyl transferases group 1 [PF13692.8, score=47.4]} {Human: ENSG00000253710, ALG11, ALG11, alpha-1,2-mannosyltransferase, [RH, Score=356, Expect=9e-118]} {Mouse: ENSMUSG00000063362, Alg11, asparagine-linked glycosylation 11 (alpha-1,2-mannosyltransferase), [RH, Score=345, Expect=1e-113]} {Dmel: FBgn0037108, CG11306, [RH, Score=346, Expect=2e-114]} {Celegans: WBGene00015162, algn-11, GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase, [RH, Score=281, Expect=3e-89]} {Smed: dd_Smed_v6_6817_0_1, dd_Smed_v6_6817_0_1, [RH, Score=310, Expect=2e-100]} {RNA1509_21057, RNA1509_7550} {RNA1310_18644.1, RNA1509_21057, RNA1509_7550} {RNA1509_21057, RNA1509_7550, RNA815_15078}
5.	MligTC455_53028	203	4.22	Mlig455_047191	Neo: - Age: -	GCM2	1.728	-	-	-	0.953	-	0.775	Mlig455_047191 {REF} {Length: 2622} {Pfam: GCM motif protein [PF03615.17, score=222.5]} {Human: ENSG00000124827, GCM2, glial cells missing homolog 2, [RH, Score=190, Expect=1e-52]; ENSG00000137270, GCM1, glial cells missing homolog 1, [RH, Score=189, Expect=8e-53]} {Mouse: ENSMUSG00000021362, Gcm2, glial cells missing homolog 2, [RH, Score=189, Expect=4e-56]; ENSMUSG00000023333, Gcm1, glial cells missing homolog 1, [RH, Score=185, Expect=1e-51]} {Dmel: FBgn0014179, gcm, glial cells missing, [RH, Score=222, Expect=1e-64]} {Smed: dd_Smed_v6_15107_0_1, dd_Smed_v6_15107_0_1, [RH, Score=180, Expect=8e-51]} {RNA1509_58813} {RNA1310_10166.1} {RNA815_24649}
6.	MligTC455_15770	1191	24.82	Mlig455_051275	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.653 Region-enriched R8: 1.446/0.02107		1.676	-	-	-	0.716	0.960	-	Mlig455_051275 {REF} {Length: 2258} {RNA1509_13508, RNA1509_30085, RNA1509_34116, RNA1509_39789, RNA1509_51939, RNA1509_56913, RNA1509_6055} {RNA1310_20495.1, RNA1509_13508, RNA1509_30085, RNA1509_34116, RNA1509_39789, RNA1509_51939, RNA1509_56913, RNA1509_6055} {RNA1509_13508, RNA1509_30085, RNA1509_34116, RNA1509_39789, RNA1509_51939, RNA1509_56913, RNA1509_6055, RNA815_3424.1}
7.	MligTC455_41145	70	1.45	Mlig455_028865	Neo: - Age: Up-Down-Down	PRR9	1.663	-	-	-	0.956	0.707	-	Mlig455_028865 {REF} {Length: 3939} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=49.3, Expect=3e-07]} {Celegans: WBGene00018026, F35A5.4, [Score=67.0, Expect=3e-12]} {RNA1509_36146} {RNA1310_33448.1} {RNA815_16256}
8.	MligTC455_28679	336	7.01	Mlig455_003817	Neo: - Age: -	ZAN	0.975	-	-	-	0.975	-	-	Mlig455_003817 {REF} {Length: 3854} {TRANSSPLICED} {Pfam: Potential DNA-binding domain [PF13891.8, score=41.9]} {Human: ENSG00000146839, ZAN, zonadhesin (gene/pseudogene), [Score=120, Expect=8e-27]} {Dmel: FBgn0037836, CG14692, [RH, Score=102, Expect=9e-22]} {RNA1509_19762, RNA1509_58225} {RNA1310_6493.1, RNA1509_19762, RNA1509_58225} {RNA1509_19762, RNA1509_58225, RNA815_7064}
9.	MligTC455_17524	186	3.87	Mlig455_019598	Neo: - Age: -		0.973	-	-	-	0.973	-	-	Mlig455_019598 {REF} {Length: 2178} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=88.0]} {Celegans: WBGene00006832, unc-105, Degenerin-like protein unc-105, [Score=50.1, Expect=3e-06]} {Smed: dd_Smed_v6_15195_0_1, dd_Smed_v6_15195_0_1, [Score=56.2, Expect=2e-08]} {RNA1509_35331} {RNA1310_2795.1} {RNA815_4169}
10.	MligTC455_22712	451	9.39	Mlig455_036500, Mlig455_056387	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.479 Regeneration-upregulated BL: 3.623 Regeneration-enriched BL: 3.623	CASZ1	0.964	-	-	-	0.964	-	-	Mlig455_036500 {REF} {Length: 3533} {Human: ENSG00000130940, CASZ1, castor zinc finger 1, [RH, Score=266, Expect=1e-73]} {Mouse: ENSMUSG00000028977, Casz1, castor zinc finger 1, [RH, Score=271, Expect=2e-75]} {Dmel: FBgn0004878, cas, castor, [RH, Score=267, Expect=3e-76]} {Smed: dd_Smed_v6_6778_0_1, dd_Smed_v6_6778_0_1, [RH, Score=478, Expect=1e-152]} {RNA1509_38584} {RNA1310_14915, RNA1509_38584} {RNA1509_38584, RNA815_45739} Mlig455_056387 {REF} {Length: 3535} {Human: ENSG00000130940, CASZ1, castor zinc finger 1, [Score=222, Expect=5e-60]} {Mouse: ENSMUSG00000028977, Casz1, castor zinc finger 1, [Score=223, Expect=2e-60]} {Dmel: FBgn0004878, cas, castor, [Score=219, Expect=4e-61]} {Smed: dd_Smed_v6_6778_0_1, dd_Smed_v6_6778_0_1, [Score=275, Expect=4e-79]} {RNA1509_38584} {RNA1310_14915} {RNA815_45739}
11.	MligTC455_23790	453	9.43	Mlig455_009423	Neo: - Age: logFC(26M/2M)=0.217		0.964	-	-	-	0.964	-	-	Mlig455_009423 {REF} {Length: 6863} {TRANSSPLICED} {RNA1509_36669, RNA1509_39243, RNA1509_40806, RNA1509_60010} {RNA1310_11105, RNA1509_36669, RNA1509_40806, RNA1509_60010} {RNA1509_36669, RNA1509_40806, RNA1509_60010, RNA815_1240.1}
12.	MligTC455_39604	875	18.22	Mlig455_050556, Mlig455_050584	Neo: - Age: - Regeneration-upregulated BL: 2.193 Regeneration-enriched BL: 2.193	SPRYD7	0.963	-	-	-	0.963	-	-	Mlig455_050556 {REF} {Length: 2533} {TRANSSPLICED} {Pfam: SPRY domain [PF00622.30, score=66.1]} {Human: ENSG00000123178, SPRYD7, SPRY domain containing 7, [RH, Score=196, Expect=1e-63]} {Mouse: ENSMUSG00000021930, Spryd7, SPRY domain containing 7, [RH, Score=196, Expect=6e-64]} {Dmel: FBgn0038564, CG7785, [RH, Score=76.3, Expect=8e-17]} {Celegans: WBGene00008939, F18H3.1, [RH, Score=161, Expect=3e-50]} {Smed: dd_Smed_v6_7490_0_1, dd_Smed_v6_7490_0_1, [RH, Score=192, Expect=2e-62]} {RNA1509_15851, RNA1509_27631, RNA1509_38695, RNA1509_48271} {RNA1310_26932, RNA1509_15851, RNA1509_27631, RNA1509_38695, RNA1509_48271} {RNA1509_15851, RNA1509_27631, RNA1509_38695, RNA1509_48271, RNA815_15621} Mlig455_050584 {REF} {Length: 1875} {TRANSSPLICED} {Pfam: SPRY domain [PF00622.30, score=38.7]} {Human: ENSG00000123178, SPRYD7, SPRY domain containing 7, [Score=164, Expect=3e-51]} {Mouse: ENSMUSG00000021930, Spryd7, SPRY domain containing 7, [Score=164, Expect=2e-51]} {Dmel: FBgn0038564, CG7785, [RH, Score=76.6, Expect=4e-17]} {Celegans: WBGene00008939, F18H3.1, [Score=127, Expect=4e-37]} {Smed: dd_Smed_v6_7490_0_1, dd_Smed_v6_7490_0_1, [Score=164, Expect=1e-51]} {RNA1509_27631} {RNA1310_26932} {RNA815_15621}
13.	MligTC455_45512	799	16.65	Mlig455_024821	Neo: - Age: -	CLINT1	0.963	-	-	-	0.963	-	-	Mlig455_024821 {REF} {Length: 5002} {Pfam: ENTH domain [PF01417.22, score=141.6]; ANTH domain [PF07651.18, score=19.3]} {Human: ENSG00000113282, CLINT1, clathrin interactor 1, [RH, Score=251, Expect=2e-74]} {Mouse: ENSMUSG00000006169, Clint1, clathrin interactor 1, [RH, Score=250, Expect=2e-74]} {Dmel: FBgn0261279, lqfR, liquid facets-Related, [RH, Score=254, Expect=7e-76]} {Celegans: WBGene00004682, rsd-3, [RH, Score=163, Expect=1e-43]} {Smed: dd_Smed_v6_1065_0_1, dd_Smed_v6_1065_0_1, [RH, Score=217, Expect=8e-64]} {RNA1509_15790, RNA1509_41864, RNA1509_6363} {RNA1310_5552, RNA1509_15790, RNA1509_41864} {RNA1509_15790, RNA1509_41864, RNA815_1630.1}
14.	MligTC455_46561	132	2.75	Mlig455_031728	Neo: - Age: logFC(26M/2M)=-0.387		0.96	-	-	-	0.960	-	-	Mlig455_031728 {REF} {Length: 2506} {RNA1509_39227} {RNA1310_10162.2} {RNA815_11026}
15.	MligTC455_40749	576	11.99	Mlig455_045396, Mlig455_045490	Neo: - Age: -	DYNC1I1	0.956	-	-	-	0.956	-	-	Mlig455_045396 {REF} {Length: 4088} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=33.3]} {Human: ENSG00000158560, DYNC1I1, dynein cytoplasmic 1 intermediate chain 1, [Score=342, Expect=2e-108]; ENSG00000077380, DYNC1I2, dynein cytoplasmic 1 intermediate chain 2, [Score=337, Expect=2e-106]} {Mouse: ENSMUSG00000029757, Dync1i1, dynein cytoplasmic 1 intermediate chain 1, [Score=343, Expect=2e-109]; ENSMUSG00000027012, Dync1i2, dynein cytoplasmic 1 intermediate chain 2, [Score=337, Expect=9e-107]} {Dmel: FBgn0003654, sw, short wing, [Score=355, Expect=2e-113]} {Celegans: WBGene00015927, dyci-1, DYnein Chain, light Intermediate, [Score=234, Expect=4e-68]} {Smed: dd_Smed_v6_1628_0_1, dd_Smed_v6_1628_0_1, [Score=351, Expect=6e-113]} {RNA1509_25160} {RNA1310_8570} {RNA815_9465} Mlig455_045490 {REF} {Length: 3842} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=34.0]} {Human: ENSG00000158560, DYNC1I1, dynein cytoplasmic 1 intermediate chain 1, [Score=342, Expect=2e-110]; ENSG00000077380, DYNC1I2, dynein cytoplasmic 1 intermediate chain 2, [Score=338, Expect=4e-109]} {Mouse: ENSMUSG00000029757, Dync1i1, dynein cytoplasmic 1 intermediate chain 1, [Score=343, Expect=3e-111]; ENSMUSG00000027012, Dync1i2, dynein cytoplasmic 1 intermediate chain 2, [Score=338, Expect=2e-109]} {Dmel: FBgn0052823, Sdic3, Sperm-specific dynein intermediate chain 3, [Score=347, Expect=5e-114]} {Celegans: WBGene00015927, dyci-1, DYnein Chain, light Intermediate, [Score=224, Expect=7e-66]} {Smed: dd_Smed_v6_1628_0_1, dd_Smed_v6_1628_0_1, [Score=351, Expect=9e-115]} {RNA1509_25160, RNA1509_43853, RNA1509_46358} {RNA1310_8570, RNA1509_25160, RNA1509_43853, RNA1509_46358} {RNA1509_25160, RNA1509_43853, RNA1509_46358, RNA815_9465}
16.	MligTC455_07305	45	0.94	Mlig455_022055	Neo: - Age: -		0.953	-	-	-	0.953	-	-	Mlig455_022055 {REF} {Length: 1195} {Mouse: ENSMUSG00000033088, Triobp, TRIO and F-actin binding protein, [Score=51.6, Expect=4e-07]} {Smed: dd_Smed_v6_1985_0_1, dd_Smed_v6_1985_0_1, [Score=53.1, Expect=5e-08]}
17.	MligTC455_51097	166	3.46	Mlig455_037318	Neo: - Age: -		0.953	-	-	-	-	0.953	-	Mlig455_037318 {REF} {Length: 676} {TRANSSPLICED} {RNA1310_59181} {RNA815_31535}
18.	MligTC455_28863	1137	23.68	Mlig455_006344, Mlig455_006392	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.963		0.951	-	-	-	0.951	-	-	Mlig455_006344 {REF} {Length: 5158} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=57.8, Expect=2e-08]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=55.5, Expect=5e-08]} {RNA1509_3887} {RNA1310_1108.1} {RNA815_5828} Mlig455_006392 {REF} {Length: 6326} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=94.6]; Ankyrin repeats (3 copies) [PF12796.9, score=84.1]; Ankyrin repeat [PF13606.8, score=58.8]; Ankyrin repeats (many copies) [PF13857.8, score=51.7]; Ankyrin repeat [PF00023.32, score=45.1]} {Celegans: WBGene00007801, trpa-1, Transient receptor potential cation channel subfamily A member 1 homolog, [Score=53.1, Expect=1e-06]} {RNA1509_34034, RNA1509_3887} {RNA1310_1108.1, RNA1509_34034, RNA1509_3887} {RNA1509_34034, RNA1509_3887, RNA815_5828}
19.	MligTC455_36527	56	1.16	Mlig455_017613	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_017613 {REF} {Length: 1129} {NoTransDecoderORF} {RNA1509_40709} {RNA1310_18972} {RNA815_34163}

Berezikov Lab - 2020-2021 © ERIBA