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Results for MligTC455_28811

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_28811 3567 74.32 Mlig455_034650, Mlig455_067615

Neo: -

Age: logFC(26M/2M)=0.250

RHBDL2, RHBDL3

Mlig455_034650 {REF} {Length: 2278} {Pfam: Rhomboid family [PF01694.24, score=119.8]; EF hand [PF00036.34, score=18.7]} {Human: ENSG00000141314, RHBDL3, rhomboid like 3, [RH, Score=192, Expect=2e-56]} {Mouse: ENSMUSG00000017692, Rhbdl3, rhomboid like 3, [RH, Score=196, Expect=4e-58]} {Dmel: FBgn0030318, rho-4, rhomboid-4, [Score=215, Expect=1e-65]} {Celegans: WBGene00004400, rom-1, Rhomboid-related protein 1, [Score=167, Expect=7e-48]} {Smed: dd_Smed_v6_3909_0_1, dd_Smed_v6_3909_0_1, [RH, Score=426, Expect=1e-148]} {RNA1509_4370} {RNA1310_10910, RNA1509_4370} {RNA1509_4370, RNA815_3991}

Mlig455_067615 {REF} {Length: 2282} {Pfam: Rhomboid family [PF01694.24, score=121.8]; EF hand [PF00036.34, score=18.7]} {Human: ENSG00000158315, RHBDL2, rhomboid like 2, [RH, Score=188, Expect=3e-56]; ENSG00000141314, RHBDL3, rhomboid like 3, [RH, Score=181, Expect=2e-52]} {Mouse: ENSMUSG00000017692, Rhbdl3, rhomboid like 3, [RH, Score=188, Expect=4e-55]} {Dmel: FBgn0030318, rho-4, rhomboid-4, [RH, Score=223, Expect=2e-68]} {Celegans: WBGene00004400, rom-1, Rhomboid-related protein 1, [Score=169, Expect=1e-48]} {Smed: dd_Smed_v6_3909_0_1, dd_Smed_v6_3909_0_1, [RH, Score=422, Expect=8e-147]} {RNA1509_4370} {RNA1310_10910} {RNA815_3991}

Cumulative graph for MligTC455_28811

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.027 6.368 0.22799 0.87192
RegionR2 -1.329 6.368 0.00881 0.09333
RegionR3 0.567 6.368 0.13809 0.63506
RegionR4 1.214 6.368 0.01015 0.06176
RegionR5 0.671 6.368 0.07099 0.24065
RegionR6 0.689 6.368 0.07784 0.51743
RegionR7 -0.293 6.368 0.51129 1.00000
RegionR8 -0.492 6.368 0.34134 0.97494

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.315 6.368 0.19102 0.93000
RegenerationR2 0.174 6.368 0.73192 0.96623
RegenerationR3 -0.144 6.368 0.77693 0.97395
RegenerationR4 -0.071 6.368 0.89244 1.00000
RegenerationR5 0.478 6.368 0.33827 0.75662
RegenerationR6 -0.084 6.368 0.86519 1.00000
RegenerationBL 0.351 6.368 0.43795 0.80535
RegenerationTP 0.459 6.368 0.37516 0.81158


Genes with expression patterns similar to MligTC455_28811

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_28811 3567 74.32 Mlig455_034650, Mlig455_067615

Neo: -

Age: logFC(26M/2M)=0.250

RHBDL2, RHBDL3 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_034650 {REF} {Length: 2278} {Pfam: Rhomboid family [PF01694.24, score=119.8]; EF hand [PF00036.34, score=18.7]} {Human: ENSG00000141314, RHBDL3, rhomboid like 3, [RH, Score=192, Expect=2e-56]} {Mouse: ENSMUSG00000017692, Rhbdl3, rhomboid like 3, [RH, Score=196, Expect=4e-58]} {Dmel: FBgn0030318, rho-4, rhomboid-4, [Score=215, Expect=1e-65]} {Celegans: WBGene00004400, rom-1, Rhomboid-related protein 1, [Score=167, Expect=7e-48]} {Smed: dd_Smed_v6_3909_0_1, dd_Smed_v6_3909_0_1, [RH, Score=426, Expect=1e-148]} {RNA1509_4370} {RNA1310_10910, RNA1509_4370} {RNA1509_4370, RNA815_3991}

Mlig455_067615 {REF} {Length: 2282} {Pfam: Rhomboid family [PF01694.24, score=121.8]; EF hand [PF00036.34, score=18.7]} {Human: ENSG00000158315, RHBDL2, rhomboid like 2, [RH, Score=188, Expect=3e-56]; ENSG00000141314, RHBDL3, rhomboid like 3, [RH, Score=181, Expect=2e-52]} {Mouse: ENSMUSG00000017692, Rhbdl3, rhomboid like 3, [RH, Score=188, Expect=4e-55]} {Dmel: FBgn0030318, rho-4, rhomboid-4, [RH, Score=223, Expect=2e-68]} {Celegans: WBGene00004400, rom-1, Rhomboid-related protein 1, [Score=169, Expect=1e-48]} {Smed: dd_Smed_v6_3909_0_1, dd_Smed_v6_3909_0_1, [RH, Score=422, Expect=8e-147]} {RNA1509_4370} {RNA1310_10910} {RNA815_3991}
2. MligTC455_36239 5931 123.57 Mlig455_043102

Neo: -

Age: logFC(26M/2M)=0.673

EPHX4 3.396 0.831 0.769 - - 0.952 0.844 Mlig455_043102 {REF} {Length: 1398} {Human: ENSG00000172031, EPHX4, epoxide hydrolase 4, [Score=120, Expect=5e-32]} {Mouse: ENSMUSG00000033805, Ephx4, epoxide hydrolase 4, [Score=107, Expect=2e-27]} {Celegans: WBGene00019329, ceeh-1, Epoxide hydrolase 1, [Score=103, Expect=5e-26]} {Smed: dd_Smed_v6_2011_0_1, dd_Smed_v6_2011_0_1, [Score=131, Expect=8e-37]} {RNA1509_7823} {RNA1310_15717.2} {RNA815_5437.1}
3. MligTC455_33893 2159 44.99 Mlig455_048120

Neo: -

Age: -

Region-enriched R5: 1.314/0.00000
Region-enriched R4: 1.116/0.00488

SHMT2 3.328 - 0.738 - 0.858 0.952 0.780 Mlig455_048120 {REF} {Length: 2300} {TRANSSPLICED} {Pfam: Serine hydroxymethyltransferase [PF00464.21, score=623.4]} {Human: ENSG00000182199, SHMT2, serine hydroxymethyltransferase 2, [Score=595, Expect=0.0]} {Mouse: ENSMUSG00000020534, Shmt1, serine hydroxymethyltransferase 1 (soluble), [RH, Score=562, Expect=0.0]} {Dmel: FBgn0029823, Shmt, Serine hydroxymethyl transferase, [RH, Score=576, Expect=0.0]} {Celegans: WBGene00003214, mel-32, Serine hydroxymethyltransferase, [RH, Score=589, Expect=0.0]} {Smed: dd_Smed_v6_2312_0_1, dd_Smed_v6_2312_0_1, [RH, Score=588, Expect=0.0]} {RNA1509_2637, RNA1509_8192} {RNA1310_8717.2, RNA1509_2637, RNA1509_8192} {RNA1509_2637, RNA1509_8192, RNA815_3601}
4. MligTC455_22491 3631 75.65 Mlig455_041782

Neo: -

Age: logFC(26M/2M)=0.178

ACADM 2.615 - - - 0.751 0.950 0.914 Mlig455_041782 {REF} {Length: 2312} {TRANSSPLICED} {Pfam: Acyl-CoA dehydrogenase, C-terminal domain [PF00441.26, score=164.4]; Acyl-CoA dehydrogenase, middle domain [PF02770.21, score=98.2]; Acyl-CoA dehydrogenase, N-terminal domain [PF02771.18, score=87.8]; Acyl-CoA dehydrogenase, C-terminal domain [PF08028.13, score=74.7]} {Human: ENSG00000117054, ACADM, acyl-CoA dehydrogenase medium chain, [RH, Score=548, Expect=0.0]} {Mouse: ENSMUSG00000062908, Acadm, acyl-Coenzyme A dehydrogenase, medium chain, [RH, Score=538, Expect=0.0]} {Dmel: FBgn0035811, CG12262, [RH, Score=577, Expect=0.0]} {Celegans: WBGene00020812, acdh-7, Acyl CoA DeHydrogenase, [RH, Score=495, Expect=5e-175]} {Smed: dd_Smed_v6_5980_0_1, dd_Smed_v6_5980_0_1, [Score=268, Expect=2e-86]} {RNA1509_2791, RNA1509_39085, RNA1509_51931, RNA1509_55101, RNA1509_6225} {RNA1310_12664.1, RNA1509_39085, RNA1509_51931, RNA1509_55101, RNA1509_6225} {RNA1509_39085, RNA1509_51931, RNA1509_55101, RNA1509_6225, RNA815_4550}
5. MligTC455_28113 6340 132.08 Mlig455_045392, Mlig455_045487

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.435

Region-enriched R3: 1.878/0.00333
Region-enriched R4: 1.592/0.02527

2.6 - 0.730 - - 0.957 0.913

Mlig455_045392 {REF} {Length: 2281} {Smed: dd_Smed_v6_6676_0_1, dd_Smed_v6_6676_0_1, [RH, Score=47.4, Expect=1e-06]} {RNA1509_25906, RNA1509_4355, RNA1509_57788} {RNA1310_17519.1, RNA1509_25906, RNA1509_57788} {RNA1509_25906, RNA1509_57788, RNA815_4908.1}

Mlig455_045487 {REF} {Length: 2124} {Smed: dd_Smed_v6_6676_0_1, dd_Smed_v6_6676_0_1, [RH, Score=47.4, Expect=1e-06]} {RNA1509_15633, RNA1509_29436, RNA1509_4355, RNA1509_55376, RNA1509_5993, RNA1509_9901} {RNA1310_17519.1, RNA1509_15633, RNA1509_29436, RNA1509_4355, RNA1509_55376, RNA1509_5993, RNA1509_9901} {RNA1509_15633, RNA1509_29436, RNA1509_4355, RNA1509_55376, RNA1509_5993, RNA1509_9901, RNA815_4908.1}
6. MligTC455_46268 5028 104.74 Mlig455_028687

Neo: -

Age: -

ACSL4 1.9 - - - - 0.971 0.929 Mlig455_028687 {REF} {Length: 3784} {TRANSSPLICED} {Pfam: AMP-binding enzyme [PF00501.30, score=333.9]; AMP-binding enzyme C-terminal domain [PF13193.8, score=22.1]} {Human: ENSG00000068366, ACSL4, acyl-CoA synthetase long chain family member 4, [RH, Score=737, Expect=0.0]; ENSG00000123983, ACSL3, acyl-CoA synthetase long chain family member 3, [RH, Score=709, Expect=0.0]} {Mouse: ENSMUSG00000031278, Acsl4, acyl-CoA synthetase long-chain family member 4, [RH, Score=743, Expect=0.0]; ENSMUSG00000032883, Acsl3, acyl-CoA synthetase long-chain family member 3, [RH, Score=712, Expect=0.0]} {Dmel: FBgn0263120, Acsl, Acyl-CoA synthetase long-chain, [RH, Score=654, Expect=0.0]} {Celegans: WBGene00016716, acs-17, Fatty Acid CoA Synthetase family, [RH, Score=620, Expect=0.0]} {Smed: dd_Smed_v6_3021_0_1, dd_Smed_v6_3021_0_1, [RH, Score=746, Expect=0.0]} {RNA1509_1555, RNA1509_21583, RNA1509_27131, RNA1509_27311, RNA1509_27684, RNA1509_33636, RNA1509_34797} {RNA1310_8471.1, RNA1509_1555, RNA1509_21583, RNA1509_27131, RNA1509_27311, RNA1509_27684, RNA1509_33636, RNA1509_34797} {RNA1509_1555, RNA1509_21583, RNA1509_27131, RNA1509_27311, RNA1509_27684, RNA1509_33636, RNA1509_34797, RNA815_2478}
7. MligTC455_46269 5052 105.25 Mlig455_028710

Neo: -

Age: logFC(26M/2M)=0.191

ACSL4 1.89 - - - - 0.973 0.917 Mlig455_028710 {REF} {Length: 3681} {TRANSSPLICED} {Pfam: AMP-binding enzyme [PF00501.30, score=333.6]; AMP-binding enzyme C-terminal domain [PF13193.8, score=22.3]} {Human: ENSG00000068366, ACSL4, acyl-CoA synthetase long chain family member 4, [RH, Score=738, Expect=0.0]; ENSG00000123983, ACSL3, acyl-CoA synthetase long chain family member 3, [RH, Score=711, Expect=0.0]} {Mouse: ENSMUSG00000031278, Acsl4, acyl-CoA synthetase long-chain family member 4, [RH, Score=744, Expect=0.0]; ENSMUSG00000032883, Acsl3, acyl-CoA synthetase long-chain family member 3, [RH, Score=712, Expect=0.0]} {Dmel: FBgn0263120, Acsl, Acyl-CoA synthetase long-chain, [RH, Score=654, Expect=0.0]} {Celegans: WBGene00016716, acs-17, Fatty Acid CoA Synthetase family, [RH, Score=621, Expect=0.0]} {Smed: dd_Smed_v6_3021_0_1, dd_Smed_v6_3021_0_1, [RH, Score=746, Expect=0.0]} {RNA1509_16669, RNA1509_34797} {RNA1310_8471.1, RNA1509_16669} {RNA1509_16669, RNA815_2478}
8. MligTC455_51810 292 6.09 Mlig455_055914

Neo: -

Age: logFC(26M/2M)=0.322

RAB29 0.968 - - - - - 0.968 Mlig455_055914 {REF} {Length: 1941} {Pfam: Ras family [PF00071.24, score=68.6]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=19.6]} {Human: ENSG00000117280, RAB29, RAB29, member RAS oncogene family, [RH, Score=123, Expect=3e-36]} {Mouse: ENSMUSG00000019832, Rab32, RAB32, member RAS oncogene family, [Score=127, Expect=9e-37]} {Dmel: FBgn0002567, Rab32, [Score=112, Expect=3e-31]} {Celegans: WBGene00011083, glo-1, Gut granule LOss; Rab GTPase GLO-1, [Score=106, Expect=4e-29]} {Smed: dd_Smed_v6_2915_0_1, dd_Smed_v6_2915_0_1, [Score=134, Expect=3e-40]} {RNA1509_54279} {RNA1310_15012} {RNA815_20567}
9. MligTC455_35469 92 1.91 Mlig455_051842

Neo: -

Age: -

FPGS 0.967 - - - - - 0.967 Mlig455_051842 {REF} {Length: 3813} {TRANSSPLICED} {Pfam: Mur ligase family, glutamate ligase domain [PF02875.23, score=19.6]} {Human: ENSG00000136877, FPGS, folylpolyglutamate synthase, [RH, Score=321, Expect=1e-102]} {Mouse: ENSMUSG00000009566, Fpgs, folylpolyglutamyl synthetase, [RH, Score=310, Expect=6e-99]} {Dmel: FBgn0030407, CG2543, [RH, Score=247, Expect=5e-75]} {Celegans: WBGene00017777, F25B5.6, Putative folylpolyglutamate synthase, [RH, Score=273, Expect=2e-85]} {Smed: dd_Smed_v6_6956_0_1, dd_Smed_v6_6956_0_1, [RH, Score=279, Expect=4e-88]} {RNA1509_52653} {RNA1310_12883} {RNA815_5992.1}
10. MligTC455_16708 1126 23.47 Mlig455_029498

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.797

Region-enriched R4: 1.447/0.01642
Region-enriched R3: 1.379/0.01773
Region-enriched R5: 1.134/0.02374

SLC13A3 0.959 - - - - 0.959 - Mlig455_029498 {REF} {Length: 2725} {Pfam: Sodium:sulfate symporter transmembrane region [PF00939.21, score=288.8]; Citrate transporter [PF03600.18, score=115.2]} {Human: ENSG00000158296, SLC13A3, solute carrier family 13 member 3, [Score=405, Expect=1e-133]} {Mouse: ENSMUSG00000018459, Slc13a3, solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3, [Score=381, Expect=2e-124]; ENSMUSG00000001095, Slc13a2, solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2, [Score=366, Expect=1e-118]; ENSMUSG00000029700, Slc13a1, solute carrier family 13 (sodium/sulfate symporters), member 1, [Score=366, Expect=2e-118]; ENSMUSG00000029843, Slc13a4, solute carrier family 13 (sodium/sulfate symporters), member 4, [Score=364, Expect=2e-117]; ENSMUSG00000020805, Slc13a5, solute carrier family 13 (sodium-dependent citrate transporter), member 5, [Score=364, Expect=6e-118]} {Dmel: FBgn0036816, Indy, I'm not dead yet, [Score=276, Expect=2e-84]} {Celegans: WBGene00003517, nac-1, Sodium-dependent low-affinity dicarboxylate transporter 1, [Score=316, Expect=1e-99]} {Smed: dd_Smed_v6_12964_0_8, dd_Smed_v6_12964_0_8, [Score=360, Expect=6e-117]} {RNA1509_9551} {RNA1310_8761.2, RNA1509_9551} {RNA1509_9551, RNA815_3645}
11. MligTC455_13959 747 15.56 Mlig455_003610, Mlig455_041582

Neo: -

Age: logFC(26M/2M)=0.281

Region-enriched R3: 1.201/0.04227

GK3P 0.957 - - - - - 0.957

Mlig455_003610 {REF} {Length: 2428} {TRANSSPLICED} {Pfam: FGGY family of carbohydrate kinases, N-terminal domain [PF00370.23, score=226.2]; FGGY family of carbohydrate kinases, C-terminal domain [PF02782.18, score=185.3]} {Human: ENSG00000229894, GK3P, glycerol kinase 3 pseudogene, [RH, Score=506, Expect=9e-175]; ENSG00000198814, GK, glycerol kinase, [RH, Score=504, Expect=3e-174]; ENSG00000196475, GK2, glycerol kinase 2, [RH, Score=489, Expect=4e-168]} {Mouse: ENSMUSG00000025059, Gk, glycerol kinase, [RH, Score=512, Expect=3e-177]; ENSMUSG00000053624, Gykl1, glycerol kinase-like 1, [RH, Score=493, Expect=7e-170]; ENSMUSG00000050553, Gk2, glycerol kinase 2, [RH, Score=490, Expect=8e-169]} {Dmel: FBgn0025592, Gk1, Glycerol kinase 1, [RH, Score=521, Expect=0.0]} {Celegans: WBGene00020007, R11F4.1, Probable glycerol kinase, [RH, Score=501, Expect=5e-174]} {Smed: dd_Smed_v6_3739_0_2, dd_Smed_v6_3739_0_2, [RH, Score=463, Expect=2e-159]} {RNA1509_6526} {RNA1310_9218, RNA1509_6526} {RNA1509_6526, RNA815_5702}

Mlig455_041582 {REF} {Length: 3595} {TRANSSPLICED} {Pfam: FGGY family of carbohydrate kinases, N-terminal domain [PF00370.23, score=226.0]; FGGY family of carbohydrate kinases, C-terminal domain [PF02782.18, score=186.1]} {Human: ENSG00000229894, GK3P, glycerol kinase 3 pseudogene, [RH, Score=504, Expect=6e-174]; ENSG00000198814, GK, glycerol kinase, [RH, Score=502, Expect=4e-173]; ENSG00000196475, GK2, glycerol kinase 2, [RH, Score=487, Expect=2e-167]} {Mouse: ENSMUSG00000025059, Gk, glycerol kinase, [RH, Score=510, Expect=2e-176]; ENSMUSG00000053624, Gykl1, glycerol kinase-like 1, [RH, Score=490, Expect=5e-169]; ENSMUSG00000050553, Gk2, glycerol kinase 2, [RH, Score=488, Expect=5e-168]} {Dmel: FBgn0025592, Gk1, Glycerol kinase 1, [RH, Score=519, Expect=2e-180]} {Celegans: WBGene00020007, R11F4.1, Probable glycerol kinase, [RH, Score=503, Expect=9e-175]} {Smed: dd_Smed_v6_3739_0_2, dd_Smed_v6_3739_0_2, [RH, Score=462, Expect=1e-158]} {RNA1509_6526} {RNA1310_9218} {RNA815_5702}
12. MligTC455_26965 32675 680.72 Mlig455_018994, Mlig455_055709

Neo: Germline

Age: logFC(26M/2M)=0.206

P4HB 0.956 - - - - 0.956 -

Mlig455_018994 {REF} {Length: 3271} {Pfam: Thioredoxin [PF00085.22, score=208.2]; Thioredoxin-like domain [PF13848.8, score=151.5]; Thioredoxin-like domain [PF13098.8, score=58.6]; Calsequestrin [PF01216.19, score=52.1]; OST3 / OST6 family, transporter family [PF04756.15, score=45.9]; Thioredoxin-like [PF13905.8, score=43.3]; ERp29, N-terminal domain [PF07912.15, score=42.6]; Thioredoxin-like [PF13899.8, score=42.6]; AhpC/TSA family [PF00578.23, score=35.2]; Redoxin [PF08534.12, score=31.1]; F plasmid transfer operon protein [PF13728.8, score=23.3]} {Human: ENSG00000185624, P4HB, prolyl 4-hydroxylase subunit beta, [RH, Score=572, Expect=0.0]} {Mouse: ENSMUSG00000025130, P4hb, prolyl 4-hydroxylase, beta polypeptide, [RH, Score=563, Expect=0.0]} {Dmel: FBgn0014002, Pdi, Protein disulfide isomerase, [RH, Score=510, Expect=3e-178]} {Celegans: WBGene00003963, pdi-2, Protein disulfide-isomerase 2, [RH, Score=565, Expect=0.0]} {Smed: dd_Smed_v6_250_0_1, dd_Smed_v6_250_0_1, [RH, Score=578, Expect=0.0]} {RNA1509_1575} {RNA1310_2450.1} {RNA815_1453.1}

Mlig455_055709 {REF} {Length: 3265} {Pfam: Thioredoxin [PF00085.22, score=208.2]; Thioredoxin-like domain [PF13848.8, score=151.5]; Thioredoxin-like domain [PF13098.8, score=58.6]; Calsequestrin [PF01216.19, score=52.1]; OST3 / OST6 family, transporter family [PF04756.15, score=45.9]; Thioredoxin-like [PF13905.8, score=43.3]; ERp29, N-terminal domain [PF07912.15, score=42.6]; Thioredoxin-like [PF13899.8, score=42.6]; AhpC/TSA family [PF00578.23, score=35.2]; Redoxin [PF08534.12, score=31.1]; F plasmid transfer operon protein [PF13728.8, score=23.3]} {Human: ENSG00000185624, P4HB, prolyl 4-hydroxylase subunit beta, [RH, Score=572, Expect=0.0]} {Mouse: ENSMUSG00000025130, P4hb, prolyl 4-hydroxylase, beta polypeptide, [RH, Score=563, Expect=0.0]} {Dmel: FBgn0014002, Pdi, Protein disulfide isomerase, [RH, Score=510, Expect=3e-178]} {Celegans: WBGene00003963, pdi-2, Protein disulfide-isomerase 2, [RH, Score=565, Expect=0.0]} {Smed: dd_Smed_v6_250_0_1, dd_Smed_v6_250_0_1, [RH, Score=578, Expect=0.0]} {RNA1509_1575, RNA1509_70} {RNA1310_2450.1, RNA1509_1575, RNA1509_70} {RNA1509_1575, RNA1509_70, RNA815_1453.1}

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