Data search
Results for MligTC455_28818
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_28818 | 607 | 12.65 | Mlig455_011129, Mlig455_034232, Mlig455_038024, Mlig455_041614 | Neo: - Age: Up-Down-Up |
UBR4 | Mlig455_011129 {REF} {Length: 2429} {RNA1509_5701} {RNA1310_17623} {RNA815_453.1} Mlig455_034232 {REF} {Length: 1867} {RNA1509_5701} {RNA1310_17623} {RNA815_453.1} Mlig455_038024 {REF} {Length: 1856} {Pfam: E3 ubiquitin-protein ligase UBR4 [PF13764.8, score=838.0]} {Human: ENSG00000127481, UBR4, ubiquitin protein ligase E3 component n-recognin 4, [Score=530, Expect=7e-162]} {Mouse: ENSMUSG00000066036, Ubr4, ubiquitin protein ligase E3 component n-recognin 4, [Score=528, Expect=5e-161]} {Dmel: FBgn0011230, poe, purity of essence, [Score=444, Expect=8e-133]} {Celegans: WBGene00016650, ubr-4, UBR E3 ubiquitin ligase homolog, [Score=242, Expect=2e-65]} {Smed: dd_Smed_v6_2422_0_1, dd_Smed_v6_2422_0_1, [Score=189, Expect=1e-48]} {RNA1509_5701} {RNA1310_17623} {RNA815_453.1} Mlig455_041614 {REF} {Length: 3232} {RNA1509_5701} {RNA1310_17623, RNA1509_5701} {RNA1509_5701, RNA815_453.1} |
Cumulative graph for MligTC455_28818
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -5.624 | 4.001 | 0.20038 | 0.83764 | |
| RegionR2 | 1.97 | 4.001 | 0.04699 | 0.25694 | |
| RegionR3 | 0.608 | 4.001 | 0.53264 | 1.00000 | |
| RegionR4 | 1.926 | 4.001 | 0.04762 | 0.18650 | |
| RegionR5 | -0.002 | 4.001 | 0.85181 | 1.00000 | |
| RegionR6 | -0.084 | 4.001 | 0.87761 | 1.00000 | |
| RegionR7 | 0.698 | 4.001 | 0.50189 | 1.00000 | |
| RegionR8 | 0.508 | 4.001 | 0.63731 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 4.545 | 4.001 | 0.46591 | 1.00000 | |
| RegenerationR2 | 0.149 | 4.001 | 0.82123 | 0.99544 | |
| RegenerationR3 | 1.188 | 4.001 | 0.12577 | 0.54712 | |
| RegenerationR4 | 0.155 | 4.001 | 0.84109 | 1.00000 | |
| RegenerationR5 | 1.12 | 4.001 | 0.14082 | 0.55371 | |
| RegenerationR6 | 2.014 | 4.001 | 0.00995 | 0.12286 | |
| RegenerationBL | 1.112 | 4.001 | 0.16119 | 0.48151 | |
| RegenerationTP | 1.819 | 4.001 | 0.02175 | 0.25111 |
Genes with expression patterns similar to MligTC455_28818
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_28818 | 607 | 12.65 | Mlig455_011129, Mlig455_034232, Mlig455_038024, Mlig455_041614 | Neo: - Age: Up-Down-Up |
UBR4 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_011129 {REF} {Length: 2429} {RNA1509_5701} {RNA1310_17623} {RNA815_453.1} Mlig455_034232 {REF} {Length: 1867} {RNA1509_5701} {RNA1310_17623} {RNA815_453.1} Mlig455_038024 {REF} {Length: 1856} {Pfam: E3 ubiquitin-protein ligase UBR4 [PF13764.8, score=838.0]} {Human: ENSG00000127481, UBR4, ubiquitin protein ligase E3 component n-recognin 4, [Score=530, Expect=7e-162]} {Mouse: ENSMUSG00000066036, Ubr4, ubiquitin protein ligase E3 component n-recognin 4, [Score=528, Expect=5e-161]} {Dmel: FBgn0011230, poe, purity of essence, [Score=444, Expect=8e-133]} {Celegans: WBGene00016650, ubr-4, UBR E3 ubiquitin ligase homolog, [Score=242, Expect=2e-65]} {Smed: dd_Smed_v6_2422_0_1, dd_Smed_v6_2422_0_1, [Score=189, Expect=1e-48]} {RNA1509_5701} {RNA1310_17623} {RNA815_453.1} Mlig455_041614 {REF} {Length: 3232} {RNA1509_5701} {RNA1310_17623, RNA1509_5701} {RNA1509_5701, RNA815_453.1} |
| 2. | MligTC455_28816 | 457 | 9.53 | Mlig455_004161, Mlig455_021538, Mlig455_031963 | Neo: - Age: - |
UBR4 | 5.908 | 0.995 | 0.997 | 0.989 | 0.959 | 0.979 | 0.989 | Mlig455_004161 {REF} {Length: 2315} {RNA1509_5701} {RNA1310_17623} {RNA815_453.1} Mlig455_021538 {REF} {Length: 1587} {Pfam: E3 ubiquitin-protein ligase UBR4 [PF13764.8, score=838.0]} {Human: ENSG00000127481, UBR4, ubiquitin protein ligase E3 component n-recognin 4, [Score=530, Expect=7e-162]} {Mouse: ENSMUSG00000066036, Ubr4, ubiquitin protein ligase E3 component n-recognin 4, [Score=528, Expect=5e-161]} {Dmel: FBgn0011230, poe, purity of essence, [Score=444, Expect=8e-133]} {Celegans: WBGene00016650, ubr-4, UBR E3 ubiquitin ligase homolog, [Score=242, Expect=2e-65]} {Smed: dd_Smed_v6_2422_0_1, dd_Smed_v6_2422_0_1, [Score=189, Expect=1e-48]} {RNA1509_5701} {RNA1310_17623} {RNA815_453.1} Mlig455_031963 {REF} {Length: 2047} {Pfam: E3 ubiquitin-protein ligase UBR4 [PF13764.8, score=838.0]} {Human: ENSG00000127481, UBR4, ubiquitin protein ligase E3 component n-recognin 4, [Score=530, Expect=7e-162]} {Mouse: ENSMUSG00000066036, Ubr4, ubiquitin protein ligase E3 component n-recognin 4, [Score=528, Expect=5e-161]} {Dmel: FBgn0011230, poe, purity of essence, [Score=444, Expect=8e-133]} {Celegans: WBGene00016650, ubr-4, UBR E3 ubiquitin ligase homolog, [Score=242, Expect=2e-65]} {Smed: dd_Smed_v6_2422_0_1, dd_Smed_v6_2422_0_1, [Score=189, Expect=1e-48]} {RNA1509_5701} {RNA1310_17623} {RNA815_453.1} |
| 3. | MligTC455_53028 | 203 | 4.22 | Mlig455_047191 | Neo: - Age: - |
GCM2 | 1.703 | - | - | - | 0.968 | - | 0.735 | Mlig455_047191 {REF} {Length: 2622} {Pfam: GCM motif protein [PF03615.17, score=222.5]} {Human: ENSG00000124827, GCM2, glial cells missing homolog 2, [RH, Score=190, Expect=1e-52]; ENSG00000137270, GCM1, glial cells missing homolog 1, [RH, Score=189, Expect=8e-53]} {Mouse: ENSMUSG00000021362, Gcm2, glial cells missing homolog 2, [RH, Score=189, Expect=4e-56]; ENSMUSG00000023333, Gcm1, glial cells missing homolog 1, [RH, Score=185, Expect=1e-51]} {Dmel: FBgn0014179, gcm, glial cells missing, [RH, Score=222, Expect=1e-64]} {Smed: dd_Smed_v6_15107_0_1, dd_Smed_v6_15107_0_1, [RH, Score=180, Expect=8e-51]} {RNA1509_58813} {RNA1310_10166.1} {RNA815_24649} |
| 4. | MligTC455_35177 | 104 | 2.17 | Mlig455_054468 | Neo: - Age: - |
1.658 | - | - | 0.956 | 0.702 | - | - | Mlig455_054468 {REF} {Length: 272} {NoTransDecoderORF} {RNA1509_34721} {RNA1310_173.2} {RNA815_14575} | |
| 5. | MligTC455_33433 | 512 | 10.66 | Mlig455_007084, Mlig455_015087, Mlig455_027876, Mlig455_033676, Mlig455_041557, Mlig455_044268, Mlig455_048656, Mlig455_058403, Mlig455_063235, Mlig455_068131 | Neo: - Age: Up-Down-Down |
0.965 | - | - | - | 0.965 | - | - | Mlig455_007084 {REF} {Length: 2774} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=33.2]} {RNA1509_13203} {RNA1310_267.2} {RNA815_381.1} Mlig455_015087 {REF} {Length: 2505} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=34.7]} {RNA1509_13203} {RNA1310_267.2} {RNA815_381.1} Mlig455_027876 {REF} {Length: 776} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=34.7]} {RNA1509_13203} {RNA1310_267.1} {RNA815_381.1} Mlig455_033676 {REF} {Length: 917} {RNA1509_52826} {RNA1310_267.2} {RNA815_381.1} Mlig455_041557 {REF} {Length: 916} {RNA1509_13203} {RNA1310_267.2} {RNA815_381.1} Mlig455_044268 {REF} {Length: 928} {TRANSSPLICED} {RNA1509_13203} {RNA1310_267.2} {RNA815_381.1} Mlig455_048656 {REF} {Length: 773} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=34.7]} {RNA1509_52826} {RNA1310_267.2} {RNA815_381.1} Mlig455_058403 {REF} {Length: 776} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=34.7]} {RNA1509_13203} {RNA1310_267.1} {RNA815_381.1} Mlig455_063235 {REF} {Length: 1007} {TRANSSPLICED} {RNA1509_13203} {RNA1310_267.2} {RNA815_381.1} Mlig455_068131 {REF} {Length: 1340} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=35.4]} {RNA1509_52826} {RNA1310_267.2} {RNA815_381.1} |
|
| 6. | MligTC455_52492 | 66 | 1.38 | Mlig455_041983 | Neo: - Age: - Region-enriched R2: 4.434/0.03756 |
0.961 | - | - | 0.961 | - | - | - | Mlig455_041983 {REF} {Length: 1100} {RNA1509_31700, RNA1509_40092} {RNA1310_225.1, RNA1509_40092} {RNA1509_40092, RNA815_107.1} | |
| 7. | MligTC455_16916 | 671 | 13.97 | Mlig455_052542 | Neo: - |
0.96 | - | - | 0.960 | - | - | - | Mlig455_052542 {REF} {Length: 687} {RNA1509_14217} {RNA1310_39857} {RNA815_21873} | |
| 8. | MligTC455_25364 | 170 | 3.55 | Mlig455_039328 | Neo: - Age: Down-Down-Up Regeneration-upregulated BL: 4.068 Regeneration-enriched BL: 4.068 |
HIST2H3C | 0.956 | - | - | - | 0.956 | - | - | Mlig455_039328 {REF} {Length: 1184} {Pfam: Core histone H2A/H2B/H3/H4 [PF00125.26, score=179.6]; Centromere kinetochore component CENP-T histone fold [PF15511.8, score=25.5]; CENP-S protein [PF15630.8, score=21.5]; PCNA-associated factor histone like domain [PF15715.7, score=21.0]} {Human: ENSG00000203811, HIST2H3C, histone cluster 2 H3 family member c, [RH, Score=271, Expect=4e-95]; ENSG00000183598, HIST2H3D, histone cluster 2 H3 family member d, [RH, Score=271, Expect=4e-95]; ENSG00000203852, HIST2H3A, histone cluster 2 H3 family member a, [RH, Score=271, Expect=4e-95]; ENSG00000275714, HIST1H3A, histone cluster 1 H3 family member a, [RH, Score=268, Expect=4e-94]; ENSG00000273983, HIST1H3G, histone cluster 1 H3 family member g, [RH, Score=268, Expect=4e-94]; ENSG00000278828, HIST1H3H, histone cluster 1 H3 family member h, [RH, Score=268, Expect=4e-94]; ENSG00000274267, HIST1H3B, histone cluster 1 H3 family member b, [RH, Score=268, Expect=4e-94]; ENSG00000197153, HIST1H3J, histone cluster 1 H3 family member j, [RH, Score=268, Expect=4e-94]; ENSG00000274750, HIST1H3E, histone cluster 1 H3 family member e, [RH, Score=268, Expect=4e-94]; ENSG00000275379, HIST1H3I, histone cluster 1 H3 family member i, [RH, Score=268, Expect=4e-94]; ENSG00000277775, HIST1H3F, histone cluster 1 H3 family member f, [RH, Score=268, Expect=4e-94]; ENSG00000278272, HIST1H3C, histone cluster 1 H3 family member c, [RH, Score=268, Expect=4e-94]; ENSG00000197409, HIST1H3D, histone cluster 1 H3 family member d, [RH, Score=268, Expect=4e-94]; ENSG00000163041, H3F3A, H3 histone family member 3A, [RH, Score=267, Expect=2e-93]; ENSG00000132475, H3F3B, H3 histone family member 3B, [RH, Score=267, Expect=2e-93]; ENSG00000168148, HIST3H3, histone cluster 3 H3, [RH, Score=263, Expect=4e-92]; ENSG00000285435, HIST3H3, histone cluster 3 H3, [RH, Score=263, Expect=4e-92]; ENSG00000203818, HIST2H3PS2, histone cluster 2 H3 pseudogene 2, [RH, Score=263, Expect=6e-92]} {Mouse: ENSMUSG00000081058, Hist2h3c2, histone cluster 2, H3c2, [RH, Score=271, Expect=3e-95]; ENSMUSG00000069273, Hist1h3e, histone cluster 1, H3e, [RH, Score=271, Expect=3e-95]; ENSMUSG00000069267, Hist1h3b, histone cluster 1, H3b, [RH, Score=271, Expect=3e-95]; ENSMUSG00000074403, Hist2h3b, histone cluster 2, H3b, [RH, Score=271, Expect=3e-95]; ENSMUSG00000069310, Hist1h3c, histone cluster 1, H3c, [RH, Score=271, Expect=3e-95]; ENSMUSG00000100210, Hist1h3f, histone cluster 1, H3f, [RH, Score=271, Expect=3e-95]; ENSMUSG00000093769, Hist2h3c1, histone cluster 2, H3c1, [RH, Score=271, Expect=3e-95]; ENSMUSG00000099583, Hist1h3d, histone cluster 1, H3d, [RH, Score=271, Expect=3e-95]; ENSMUSG00000069265, Hist1h3a, histone cluster 1, H3a, [RH, Score=268, Expect=2e-94]; ENSMUSG00000099517, Hist1h3g, histone cluster 1, H3g, [RH, Score=268, Expect=2e-94]; ENSMUSG00000101972, Hist1h3i, histone cluster 1, H3i, [RH, Score=268, Expect=2e-94]; ENSMUSG00000101355, Hist1h3h, histone cluster 1, H3h, [RH, Score=268, Expect=2e-94]; ENSMUSG00000016559, H3f3b, H3 histone, family 3B, [RH, Score=267, Expect=1e-93]; ENSMUSG00000060743, H3f3a, H3 histone, family 3A, [RH, Score=267, Expect=1e-93]} {Dmel: FBgn0051613, His3:CG31613, [RH, Score=271, Expect=2e-95]} {Celegans: WBGene00001945, his-71, Histone H3.3 type 1, [RH, Score=266, Expect=9e-94]} {Smed: dd_Smed_v6_13347_0_1, dd_Smed_v6_13347_0_1, [RH, Score=271, Expect=1e-95]} {RNA1509_6806} {RNA1310_41986.1} {RNA815_19717.2} |
| 9. | MligTC455_51626 | 987 | 20.57 | Mlig455_013225, Mlig455_013252, Mlig455_013320 | Neo: - Age: logFC(26M/2M)=-0.416 |
NRG2 | 0.955 | - | - | - | 0.955 | - | - | Mlig455_013225 {REF} {Length: 3859} {Pfam: Immunoglobulin domain [PF13927.8, score=39.3]; Immunoglobulin I-set domain [PF07679.18, score=32.1]; Immunoglobulin domain [PF00047.27, score=29.5]; Immunoglobulin domain [PF13895.8, score=27.4]} {Human: ENSG00000158458, NRG2, neuregulin 2, [RH, Score=99.0, Expect=8e-21]} {Mouse: ENSMUSG00000060275, Nrg2, neuregulin 2, [RH, Score=93.2, Expect=7e-20]} {Dmel: FBgn0003984, vn, vein, [Score=65.9, Expect=6e-11]} {RNA1509_20317} {RNA1310_6062.1} {RNA815_3326.1} Mlig455_013252 {REF} {Length: 3213} {Pfam: Immunoglobulin domain [PF13927.8, score=38.7]; Immunoglobulin I-set domain [PF07679.18, score=31.7]; Immunoglobulin domain [PF00047.27, score=29.2]; Immunoglobulin domain [PF13895.8, score=27.3]} {Human: ENSG00000158458, NRG2, neuregulin 2, [Score=98.2, Expect=2e-20]} {Mouse: ENSMUSG00000060275, Nrg2, neuregulin 2, [Score=92.4, Expect=6e-19]} {Dmel: FBgn0003984, vn, vein, [Score=65.1, Expect=1e-10]} {RNA1509_20317} {RNA1310_18314.1} {RNA815_3326.1} Mlig455_013320 {REF} {Length: 4084} {Pfam: Immunoglobulin domain [PF13927.8, score=38.9]; Immunoglobulin I-set domain [PF07679.18, score=31.8]; Immunoglobulin domain [PF00047.27, score=29.3]; Immunoglobulin domain [PF13895.8, score=27.4]} {Human: ENSG00000158458, NRG2, neuregulin 2, [RH, Score=99.8, Expect=5e-21]} {Mouse: ENSMUSG00000060275, Nrg2, neuregulin 2, [RH, Score=93.6, Expect=6e-20]} {Dmel: FBgn0003984, vn, vein, [Score=65.9, Expect=7e-11]} {RNA1509_20317} {RNA1310_6062.1, RNA1509_20317} {RNA1509_20317, RNA815_3326.1} |
| 10. | MligTC455_29212 | 747 | 15.57 | Mlig455_054508, Mlig455_055425 | Neo: - Age: logFC(26M/2M)=-0.335 |
TTN | 0.954 | - | - | - | 0.954 | - | - | Mlig455_054508 {REF} {Length: 7764} {TRANSSPLICED} {Pfam: Immunoglobulin I-set domain [PF07679.18, score=304.8]; Immunoglobulin domain [PF13927.8, score=223.4]; Immunoglobulin domain [PF13895.8, score=127.4]; Immunoglobulin domain [PF00047.27, score=123.7]; Immunoglobulin V-set domain [PF07686.19, score=46.1]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=31.0]; Penicillin-Binding Protein C-terminus Family [PF06832.14, score=25.2]; Spectrin repeat [PF00435.23, score=19.4]; Izumo-like Immunoglobulin domain [PF16706.7, score=18.7]} {Human: ENSG00000155657, TTN, titin, [Score=162, Expect=7e-39]; ENSG00000072195, SPEG, SPEG complex locus, [Score=161, Expect=6e-39]} {Mouse: ENSMUSG00000051747, Ttn, titin, [Score=178, Expect=4e-44]} {Dmel: FBgn0053519, Unc-89, [Score=220, Expect=6e-57]} {Celegans: WBGene00006820, unc-89, Muscle M-line assembly protein unc-89, [Score=187, Expect=3e-47]} {Smed: dd_Smed_v6_3381_0_2, dd_Smed_v6_3381_0_2, [RH, Score=238, Expect=4e-63]} {RNA1509_5183} {RNA1310_917.1} {RNA815_445} Mlig455_055425 {REF} {Length: 8235} {Pfam: Immunoglobulin I-set domain [PF07679.18, score=304.1]; Immunoglobulin domain [PF13927.8, score=224.2]; Immunoglobulin domain [PF00047.27, score=127.7]; Immunoglobulin domain [PF13895.8, score=127.3]; Immunoglobulin V-set domain [PF07686.19, score=46.6]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=31.3]; Penicillin-Binding Protein C-terminus Family [PF06832.14, score=26.0]; Spectrin repeat [PF00435.23, score=20.5]; Izumo-like Immunoglobulin domain [PF16706.7, score=18.8]} {Human: ENSG00000155657, TTN, titin, [Score=163, Expect=2e-39]; ENSG00000072195, SPEG, SPEG complex locus, [Score=161, Expect=6e-39]} {Mouse: ENSMUSG00000051747, Ttn, titin, [Score=177, Expect=1e-43]} {Dmel: FBgn0053519, Unc-89, [Score=222, Expect=1e-57]} {Celegans: WBGene00006820, unc-89, Muscle M-line assembly protein unc-89, [Score=187, Expect=3e-47]} {Smed: dd_Smed_v6_3381_0_2, dd_Smed_v6_3381_0_2, [RH, Score=241, Expect=8e-64]} {RNA1509_5183, RNA1509_54810} {RNA1310_917.1, RNA1509_5183, RNA1509_54810} {RNA1509_5183, RNA1509_54810, RNA815_445} |
| 11. | MligTC455_34927 | 451 | 9.4 | Mlig455_049016 | Neo: - Age: logFC(26M/2M)=-0.304 |
0.954 | - | - | - | 0.954 | - | - | Mlig455_049016 {REF} {Length: 1741} {RNA1509_22221} {RNA1310_17396.1, RNA1509_22221} {RNA1509_22221, RNA815_24978} | |
| 12. | MligTC455_31633 | 48 | 0.99 | Mlig455_026671, Mlig455_057526 | Neo: - Age: - |
0.952 | - | - | 0.952 | - | - | - | Mlig455_026671 {REF} {Length: 620} {RNA1509_59040} {RNA1310_28597} {RNA815_11672.2} Mlig455_057526 {REF} {Length: 971} {NoTransDecoderORF} {RNA1509_59040} {RNA1310_44618.2} {RNA815_11672.1} |
|
| 13. | MligTC455_47332 | 284 | 5.91 | Mlig455_025909 | Neo: - Age: logFC(26M/2M)=-0.384 |
0.95 | - | - | 0.950 | - | - | - | Mlig455_025909 {REF} {Length: 2782} {Pfam: Dynamin family [PF00350.25, score=36.8]} {Smed: dd_Smed_v6_1371_0_1, dd_Smed_v6_1371_0_1, [Score=115, Expect=2e-27]} {RNA1509_5996} {RNA1310_3463.1} {RNA815_1104.1} |