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Results for MligTC455_28872

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_28872 77 1.59 Mlig455_014583

Neo: -

Age: Down-Up-Down

 Mlig455_014583 {REF} {Length: 596} {NoTransDecoderORF} {RNA1310_80178} {RNA815_51123.1}

Cumulative graph for MligTC455_28872

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.836 1.773 0.33178 0.97766
RegionR2 0.111 1.773 0.83286 1.00000
RegionR3 0.702 1.773 0.49202 0.99005
RegionR4 0.842 1.773 0.45556 0.78383
RegionR5 1.055 1.773 0.24198 0.55411
RegionR6 0.199 1.773 0.78819 1.00000
RegionR7 0.651 1.773 0.61466 1.00000
RegionR8 1.277 1.773 0.38414 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.639 1.773 0.99994 1.00000
RegenerationR2 -0.128 1.773 0.87644 1.00000
RegenerationR3 0.364 1.773 0.65245 0.92992
RegenerationR4 -0.19 1.773 0.83094 0.99765
RegenerationR5 0.212 1.773 0.74752 0.97084
RegenerationR6 -0.3 1.773 0.76318 0.95794
RegenerationBL -4.327 1.773 0.07781 0.32558
RegenerationTP 0.736 1.773 0.49415 0.89774


Genes with expression patterns similar to MligTC455_28872

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_28872 77 1.59 Mlig455_014583

Neo: -

Age: Down-Up-Down

 5 1.000 1.000 - 1.000 1.000 1.000 Mlig455_014583 {REF} {Length: 596} {NoTransDecoderORF} {RNA1310_80178} {RNA815_51123.1}
2. MligTC455_28873 91 1.9 Mlig455_014584

Neo: -

Age: logFC(26M/2M)=0.498

 4.611 0.986 0.979 - 0.992 0.836 0.818 Mlig455_014584 {REF} {Length: 2568} {TRANSSPLICED} {RNA1509_19975} {RNA1310_13894.2} {RNA815_4213}
3. MligTC455_33069 146 3.04 Mlig455_011944

Neo: -

Age: Down-Up-Down

 1.857 0.961 - - - 0.896 - Mlig455_011944 {REF} {Length: 1422} {TRANSSPLICED} {RNA1509_20571, RNA1509_24355, RNA1509_56123} {RNA1310_38731, RNA1509_24355, RNA1509_56123} {RNA1509_24355, RNA1509_56123, RNA815_19943}
4. MligTC455_33068 138 2.87 Mlig455_011936

Neo: -

Age: -

 1.833 0.959 - - - 0.874 - Mlig455_011936 {REF} {Length: 1402} {TRANSSPLICED} {RNA1509_20571} {RNA1310_38731} {RNA815_19943}
5. MligTC455_26263 70 1.45 Mlig455_040654

Neo: -

Age: Up-Down-Down

 NR1I3 1.787 0.953 - - - - 0.834 Mlig455_040654 {REF} {Length: 4785} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=73.2]} {Human: ENSG00000143257, NR1I3, nuclear receptor subfamily 1 group I member 3, [Score=103, Expect=1e-23]} {Mouse: ENSMUSG00000005677, Nr1i3, nuclear receptor subfamily 1, group I, member 3, [Score=99.8, Expect=3e-22]; ENSMUSG00000022809, Nr1i2, nuclear receptor subfamily 1, group I, member 2, [Score=99.4, Expect=1e-21]; ENSMUSG00000022479, Vdr, vitamin D (1,25-dihydroxyvitamin D3) receptor, [Score=95.5, Expect=2e-20]} {Dmel: FBgn0015240, Hr96, Hormone receptor-like in 96, [Score=98.2, Expect=7e-21]} {Celegans: WBGene00000908, daf-12, Nuclear hormone receptor family member daf-12, [Score=112, Expect=2e-25]} {Smed: dd_Smed_v6_5200_0_1, dd_Smed_v6_5200_0_1, [Score=183, Expect=2e-50]} {RNA1509_15212} {RNA1310_18440} {RNA815_11206}
6. MligTC455_33035 111 2.31 Mlig455_023600, Mlig455_068104

Neo: -

Age: -

 1.768 0.959 - - 0.809 - -

Mlig455_023600 {REF} {Length: 890} {TRANSSPLICED} {RNA1509_27370} {RNA1310_39061} {RNA815_2112.1}

Mlig455_068104 {REF} {Length: 246} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_27370} {RNA1310_39061} {RNA815_2112.1}
7. MligTC455_34490 690 14.36 Mlig455_047518

Neo: -

Age: Down-Up-Up

 SEC22B 1.709 - - - - 0.958 0.751 Mlig455_047518 {REF} {Length: 2820} {Pfam: Regulated-SNARE-like domain [PF13774.8, score=83.4]; Synaptobrevin [PF00957.23, score=52.5]} {Human: ENSG00000265808, SEC22B, SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), [RH, Score=275, Expect=9e-90]} {Mouse: ENSMUSG00000027879, Sec22b, SEC22 homolog B, vesicle trafficking protein, [RH, Score=275, Expect=6e-90]} {Dmel: FBgn0260855, Sec22, Secretory 22, [RH, Score=236, Expect=6e-75]} {Celegans: WBGene00018853, sec-22, Yeast SEC homolog, [RH, Score=192, Expect=2e-58]} {Smed: dd_Smed_v6_8369_0_1, dd_Smed_v6_8369_0_1, [RH, Score=294, Expect=9e-98]} {RNA1509_31711, RNA1509_3231} {RNA1310_11259, RNA1509_31711} {RNA1509_31711, RNA815_14769}
8. MligTC455_43644 59 1.24 Mlig455_001464

Neo: Int S/G2/M

Age: -

 PMS2 0.97 0.970 - - - - - Mlig455_001464 {REF} {Length: 5111} {Pfam: DNA mismatch repair protein, C-terminal domain [PF01119.21, score=72.1]; MutL C terminal dimerisation domain [PF08676.13, score=63.6]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF13589.8, score=39.7]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF02518.28, score=21.4]} {Human: ENSG00000122512, PMS2, PMS1 homolog 2, mismatch repair system component, [RH, Score=312, Expect=1e-92]} {Mouse: ENSMUSG00000079109, Pms2, PMS1 homolog2, mismatch repair system component, [RH, Score=314, Expect=1e-93]} {Dmel: FBgn0011660, Pms2, [RH, Score=269, Expect=4e-77]} {Celegans: WBGene00004064, pms-2, PMS (Post Meiotic Segregation) family, [RH, Score=245, Expect=2e-69]} {Smed: dd_Smed_v6_16760_0_2, dd_Smed_v6_16760_0_2, [RH, Score=260, Expect=2e-76]} {RNA1509_20911} {RNA1310_4642, RNA1509_20911} {RNA1509_20911, RNA815_7455}
9. MligTC455_51459 181 3.76 Mlig455_010077, Mlig455_063246

Neo: -

Age: Down-Up-Up

 0.969 - - - - 0.969 -

Mlig455_010077 {REF} {Length: 657} {Pfam: Tyrosine hydroxylase N terminal [PF12549.10, score=42.7]} {RNA1310_62596} {RNA815_36555}

Mlig455_063246 {REF} {Length: 828} {Pfam: Tyrosine hydroxylase N terminal [PF12549.10, score=52.3]; P-loop ATPase protein family [PF03668.17, score=21.6]} {RNA1310_62596} {RNA815_36555}
10. MligTC455_42364 9 0.2 Mlig455_007252

Neo: -

Age: -

 0.964 - - - - 0.964 - Mlig455_007252 {REF} {Length: 523} {RNA1509_2515} {RNA1310_11307} {RNA815_3258.1}
11. MligTC455_43077 388 8.08 Mlig455_002766

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.519

 0.962 0.962 - - - - - Mlig455_002766 {REF} {Length: 1376} {RNA1509_54086} {RNA1310_5535} {RNA815_6435}
12. MligTC455_41184 122 2.54 Mlig455_027548

Neo: -

Age: -

 NR2E1 0.961 0.961 - - - - - Mlig455_027548 {REF} {Length: 3026} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=100.4]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=36.9]} {Human: ENSG00000112333, NR2E1, nuclear receptor subfamily 2 group E member 1, [Score=132, Expect=2e-33]} {Mouse: ENSMUSG00000019803, Nr2e1, nuclear receptor subfamily 2, group E, member 1, [Score=134, Expect=3e-34]} {Dmel: FBgn0003720, tll, tailless, [Score=124, Expect=1e-30]} {Celegans: WBGene00021417, nhr-236, Nuclear Hormone Receptor family, [RH, Score=142, Expect=1e-38]} {Smed: dd_Smed_v6_25420_0_1, dd_Smed_v6_25420_0_1, [Score=167, Expect=1e-45]} {RNA1509_35109} {RNA1310_11088} {RNA815_39381}
13. MligTC455_24455 131 2.72 Mlig455_006310

Neo: -

Age: -

 0.96 0.960 - - - - - Mlig455_006310 {REF} {Length: 2448} {RNA1509_7020} {RNA1310_76552} {RNA815_41542}
14. MligTC455_12151 45 0.93 Mlig455_008852

Neo: -

Age: -

 0.954 0.954 - - - - - Mlig455_008852 {REF} {Length: 1057} {RNA1509_33014} {RNA1310_11113, RNA1509_33014} {RNA1509_33014, RNA815_40402.2}
15. MligTC455_17384 124 2.58 Mlig455_053941

Neo: -

Age: Down-Up-Up

 0.954 0.954 - - - - - Mlig455_053941 {REF} {Length: 2345} {TRANSSPLICED} {Pfam: Dpy-30 motif [PF05186.15, score=19.5]} {RNA1509_40671} {RNA1310_24234.1, RNA1509_40671} {RNA1509_40671, RNA815_9984}
16. MligTC455_45070 112 2.33 Mlig455_035124

Neo: -

Age: logFC(26M/2M)=-0.296

 DICER1 0.953 0.953 - - - - - Mlig455_035124 {REF} {Length: 6642} {TRANSSPLICED} {Pfam: Ribonuclease III domain [PF00636.28, score=122.3]; Ribonuclease-III-like [PF14622.8, score=60.3]; Dicer dimerisation domain [PF03368.16, score=60.1]; Helicase conserved C-terminal domain [PF00271.33, score=54.7]; Type III restriction enzyme, res subunit [PF04851.17, score=52.4]; DEAD/DEAH box helicase [PF00270.31, score=43.0]} {Human: ENSG00000100697, DICER1, dicer 1, ribonuclease III, [Score=152, Expect=4e-36]} {Mouse: ENSMUSG00000041415, Dicer1, dicer 1, ribonuclease type III, [Score=157, Expect=1e-37]} {Dmel: FBgn0039016, Dcr-1, Dicer-1, [Score=172, Expect=1e-42]} {Celegans: WBGene00015646, mlt-10, [RH, Score=181, Expect=6e-47]} {Smed: dd_Smed_v6_8502_0_1, dd_Smed_v6_8502_0_1, [Score=253, Expect=9e-68]} {RNA1509_8443} {RNA1310_1036} {RNA815_2656}
17. MligTC455_15974 179 3.73 Mlig455_046153, Mlig455_046238

Neo: -

Age: -

Region-enriched R2: 9.367/0.02495

 0.951 - - - - 0.951 -

Mlig455_046153 {REF} {Length: 345} {Pfam: Pancreatic hormone peptide [PF00159.20, score=36.0]} {RNA1310_79109} {RNA815_46493}

Mlig455_046238 {REF} {Length: 211} {NoTransDecoderORF} {RNA1310_79109} {RNA815_46493}
18. MligTC455_12817 26 0.54 Mlig455_039450

Neo: Int S/G2/M

Age: -

 0.95 0.950 - - - - - Mlig455_039450 {REF} {Length: 1843} {RNA1310_54745} {RNA815_39086}
19. MligTC455_25642 404 8.41 Mlig455_055674

Neo: -

Age: logFC(26M/2M)=-0.267

Regeneration-downregulated BL: -3.906

Regeneration-depleted BL: -3.906

 TRAF3 0.95 0.950 - - - - - Mlig455_055674 {REF} {Length: 3425} {Pfam: TRAF-type zinc finger [PF02176.20, score=35.2]; Seven in absentia protein family [PF03145.18, score=32.2]} {Human: ENSG00000131323, TRAF3, TNF receptor associated factor 3, [Score=68.9, Expect=2e-11]} {Mouse: ENSMUSG00000021277, Traf3, TNF receptor-associated factor 3, [Score=75.5, Expect=1e-13]; ENSMUSG00000027164, Traf6, TNF receptor-associated factor 6, [Score=72.0, Expect=1e-12]} {Dmel: FBgn0026319, Traf4, TNF-receptor-associated factor 4, [Score=58.5, Expect=1e-08]} {Smed: dd_Smed_v6_8046_0_1, dd_Smed_v6_8046_0_1, [Score=79.0, Expect=4e-15]} {RNA1509_45640} {RNA1310_11522} {RNA815_6004}

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