M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_28922

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_28922 774 16.13 Mlig455_002436

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.650

 Mlig455_002436 {REF} {Length: 2560} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=66.2]} {Smed: dd_Smed_v6_18284_0_1, dd_Smed_v6_18284_0_1, [Score=53.9, Expect=1e-07]} {RNA1509_13072} {RNA1310_4523} {RNA815_13372}

Cumulative graph for MligTC455_28922

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.272 4.249 0.10912 0.68843
RegionR2 0.881 4.249 0.10553 0.40036
RegionR3 0.504 4.249 0.26109 0.80479
RegionR4 -0.26 4.249 0.62990 0.93822
RegionR5 -0.532 4.249 0.26562 0.58863
RegionR6 0.27 4.249 0.55847 1.00000
RegionR7 0.793 4.249 0.10674 0.62070
RegionR8 0.616 4.249 0.30186 0.93235

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.3 4.249 0.91099 1.00000
RegenerationR2 0.041 4.249 0.92847 1.00000
RegenerationR3 0.448 4.249 0.37766 0.78917
RegenerationR4 0.625 4.249 0.22995 0.67918
RegenerationR5 0.99 4.249 0.04953 0.35931
RegenerationR6 -0.025 4.249 0.96267 1.00000
RegenerationBL -1.103 4.249 0.08329 0.33794
RegenerationTP 0.973 4.249 0.06556 0.41259


Genes with expression patterns similar to MligTC455_28922

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_28922 774 16.13 Mlig455_002436

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.650

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_002436 {REF} {Length: 2560} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=66.2]} {Smed: dd_Smed_v6_18284_0_1, dd_Smed_v6_18284_0_1, [Score=53.9, Expect=1e-07]} {RNA1509_13072} {RNA1310_4523} {RNA815_13372}
2. MligTC455_28924 662 13.79 Mlig455_022570

Neo: -

Age: -

 5.615 0.996 0.993 0.976 0.962 0.706 0.982 Mlig455_022570 {REF} {Length: 2344} {Pfam: MULE transposase domain [PF10551.11, score=49.3]} {Smed: dd_Smed_v6_40199_0_1, dd_Smed_v6_40199_0_1, [RH, Score=86.3, Expect=5e-21]} {RNA1509_23118} {RNA1310_7844.1} {RNA815_13372}
3. MligTC455_28923 711 14.81 Mlig455_005200

Neo: -

Age: -

 4.654 0.997 0.996 0.979 0.970 0.712 - Mlig455_005200 {REF} {Length: 1481} {TRANSSPLICED} {RNA1509_23118, RNA1509_27963} {RNA1310_26014.1, RNA1509_27963} {RNA1509_27963, RNA815_13372}
4. MligTC455_28925 1037 21.6 Mlig455_016262

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-1.009

 4.379 0.920 0.994 0.824 - 0.745 0.896 Mlig455_016262 {REF} {Length: 1728} {TRANSSPLICED} {RNA1509_3334} {RNA1310_26014.1} {RNA815_10997.1}
5. MligTC455_28926 1969 41.03 Mlig455_005441, Mlig455_012027, Mlig455_061378

Neo: -

Age: -

Region-enriched R4: 1.857/0.01696

 2.763 - 0.981 0.827 - - 0.955

Mlig455_005441 {REF} {Length: 476} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=56.2]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=32.7]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=63.2, Expect=4e-13]} {RNA1509_35318} {RNA1310_59.1} {RNA815_29.1}

Mlig455_012027 {REF} {Length: 2504} {RNA1509_11715} {RNA1310_46568} {RNA815_914.1}

Mlig455_061378 {REF} {Length: 5785} {TRANSSPLICED} {Pfam: Zinc knuckle [PF00098.25, score=22.4]} {RNA1509_13611} {RNA1310_59.1} {RNA815_29.1}
6. MligTC455_31449 314 6.53 Mlig455_008143, Mlig455_039731, Mlig455_070534

Neo: -

Age: -

 2.485 - - 0.771 - 0.961 0.753

Mlig455_008143 {REF} {Length: 1013} {Pfam: Cytoplasmic repetitive antigen (CRA) like repeat [PF07046.13, score=28.8]; Essential protein Yae1, N terminal [PF09811.11, score=27.3]} {RNA1509_53217} {RNA1310_59954.1} {RNA815_36681.1}

Mlig455_039731 {REF} {Length: 1281} {TRANSSPLICED} {Pfam: Essential protein Yae1, N terminal [PF09811.11, score=26.1]; Cytoplasmic repetitive antigen (CRA) like repeat [PF07046.13, score=25.7]} {RNA1509_53217} {RNA1310_59954.1} {RNA815_36681.1}

Mlig455_070534 {REF} {Length: 1190} {RNA1509_53217} {RNA1310_59954.1} {RNA815_36681.1}
7. MligTC455_29274 1490 31.05 Mlig455_010337

Neo: -

Age: -

 1.821 - 0.955 - - - 0.866 Mlig455_010337 {REF} {Length: 4823} {TRANSSPLICED} {RNA1509_23118, RNA1509_40105} {RNA1310_26014.1, RNA1509_23118, RNA1509_40105} {RNA1509_23118, RNA1509_40105, RNA815_13372}
8. MligTC455_32423 283 5.9 Mlig455_055060

Neo: Irradiation

Age: Up-Down-Down

 1.793 - 0.834 - - 0.959 - Mlig455_055060 {REF} {Length: 2866} {RNA1509_52975} {RNA1310_17621, RNA1509_52975} {RNA1509_52975, RNA815_10158}
9. MligTC455_41094 224 4.68 Mlig455_024257, Mlig455_058076

Neo: -

Age: -

 1.754 - - - - 0.956 0.798

Mlig455_024257 {REF} {Length: 1825} {RNA1509_33135} {RNA1310_234.1, RNA1509_33135} {RNA1509_33135, RNA815_23.1}

Mlig455_058076 {REF} {Length: 1544} {NoTransDecoderORF} {RNA1509_9188} {RNA1310_234.1} {RNA815_23.1}
10. MligTC455_42965 425 8.85 Mlig455_053567

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.299

 SPATA6L 1.73 - - - - 0.953 0.777 Mlig455_053567 {REF} {Length: 2164} {TRANSSPLICED} {Pfam: Spermatogenesis-assoc protein 6 [PF14909.8, score=127.3]} {Human: ENSG00000106686, SPATA6L, spermatogenesis associated 6 like, [RH, Score=96.7, Expect=5e-22]} {Mouse: ENSMUSG00000064202, 4430402I18Rik, RIKEN cDNA 4430402I18 gene, [RH, Score=98.6, Expect=3e-22]} {Smed: dd_Smed_v6_10543_0_1, dd_Smed_v6_10543_0_1, [RH, Score=191, Expect=2e-57]} {RNA1509_23645} {RNA1310_24559} {RNA815_31401}
11. MligTC455_29275 691 14.4 Mlig455_054471

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=1.416

 1.709 - 0.962 - - - 0.747 Mlig455_054471 {REF} {Length: 1554} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_23118} {RNA1310_26014.1} {RNA815_13372}
12. MligTC455_29067 766 15.96 Mlig455_052924, Mlig455_062051

Neo: -

Age: -

 1.697 - - 0.739 - 0.958 -

Mlig455_052924 {REF} {Length: 5034} {Pfam: PHD-finger [PF00628.31, score=24.4]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=22.7]; PHD - plant homeodomain finger protein [PF07227.13, score=19.7]} {RNA1509_29353} {RNA1310_4523} {RNA815_17419}

Mlig455_062051 {REF} {Length: 5910} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=82.0]} {Smed: dd_Smed_v6_16441_0_5, dd_Smed_v6_16441_0_5, [Score=94.4, Expect=3e-21]} {RNA1509_23986} {RNA1310_4523} {RNA815_17419}
13. MligTC455_26840 353 7.36 Mlig455_020643

Neo: -

Age: -

 PIF1 1.69 - - 0.716 - 0.974 - Mlig455_020643 {REF} {Length: 12767} {Pfam: PIF1-like helicase [PF05970.16, score=324.2]; Helitron helicase-like domain at N-terminus [PF14214.8, score=197.6]; AAA domain [PF13604.8, score=47.7]; Helicase [PF02689.16, score=22.5]; UvrD-like helicase C-terminal domain [PF13538.8, score=20.0]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=96.7, Expect=1e-19]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=91.3, Expect=4e-18]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=90.1, Expect=7e-18]} {Celegans: WBGene00019136, F59H6.5, [RH, Score=778, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=105, Expect=8e-23]} {RNA1509_48797} {RNA1310_4110} {RNA815_358.1}
14. MligTC455_45432 647 13.49 Mlig455_033896

Neo: -

Age: logFC(26M/2M)=-0.262

 PRKAR1A 1.656 - 0.701 - - 0.955 - Mlig455_033896 {REF} {Length: 4119} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=78.8]} {Human: ENSG00000108946, PRKAR1A, protein kinase cAMP-dependent type I regulatory subunit alpha, [Score=53.5, Expect=7e-07]} {Mouse: ENSMUSG00000020612, Prkar1a, protein kinase, cAMP dependent regulatory, type I, alpha, [Score=52.4, Expect=1e-06]} {Dmel: FBgn0022382, Pka-R2, Protein kinase, cAMP-dependent, regulatory subunit type 2, [Score=57.4, Expect=2e-08]} {Celegans: WBGene00002190, kin-2, cAMP-dependent protein kinase regulatory subunit, [Score=57.4, Expect=2e-08]} {Smed: dd_Smed_v6_13623_0_1, dd_Smed_v6_13623_0_1, [RH, Score=446, Expect=3e-147]} {RNA1509_7481} {RNA1310_4517, RNA1509_7481} {RNA1509_7481, RNA815_741.1}
15. MligTC455_30811 661 13.78 Mlig455_003103, Mlig455_058346

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.450

 0.972 - - - - 0.972 -

Mlig455_003103 {REF} {Length: 13092} {RNA1509_25856} {RNA1310_27487} {RNA815_15897.1}

Mlig455_058346 {REF} {Length: 2702} {TRANSSPLICED} {RNA1509_25856} {RNA1310_18000.1} {RNA815_10283}
16. MligTC455_29267 1620 33.74 Mlig455_015915, Mlig455_022196, Mlig455_023895, Mlig455_035149, Mlig455_052692, Mlig455_053492, Mlig455_056601, Mlig455_060335

Neo: -

Age: -

Regeneration-upregulated TP: 4.028

Regeneration-enriched TP: 4.028

 0.969 - - - - 0.969 -

Mlig455_015915 {REF} {Length: 4919} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=117.1]; Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=19.6]} {Smed: dd_Smed_v6_26484_0_6, dd_Smed_v6_26484_0_6, [Score=63.9, Expect=6e-12]} {RNA1509_13072} {RNA1310_4523} {RNA815_11143}

Mlig455_022196 {REF} {Length: 4965} {Pfam: PHD-finger [PF00628.31, score=23.6]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=21.0]} {RNA1509_29353, RNA1509_51984} {RNA1310_4523, RNA1509_51984} {RNA1509_51984, RNA815_17419}

Mlig455_023895 {REF} {Length: 2375} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=34.5]} {Smed: dd_Smed_v6_16441_0_1, dd_Smed_v6_16441_0_1, [Score=54.7, Expect=2e-09]} {RNA1509_13072} {RNA1310_4523} {RNA815_17419}

Mlig455_035149 {REF} {Length: 1607} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=125.5]; Endonuclease-reverse transcriptase [PF14529.8, score=39.5]; Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=22.8]} {Smed: dd_Smed_v6_16441_0_5, dd_Smed_v6_16441_0_5, [Score=105, Expect=7e-24]} {RNA1509_23986} {RNA1310_4523} {RNA815_1327.1}

Mlig455_052692 {REF} {Length: 1942} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=125.5]; Endonuclease-reverse transcriptase [PF14529.8, score=39.5]; Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=22.8]} {Smed: dd_Smed_v6_16441_0_5, dd_Smed_v6_16441_0_5, [Score=105, Expect=7e-24]} {RNA1509_13072, RNA1509_23986} {RNA1310_4523, RNA1509_23986} {RNA1509_23986, RNA815_1327.1}

Mlig455_053492 {REF} {Length: 206} {NoTransDecoderORF} {RNA1509_2860} {RNA1310_1097.2} {RNA815_21778}

Mlig455_056601 {REF} {Length: 648} {NoTransDecoderORF} {RNA1509_25000} {RNA1310_4307.1} {RNA815_2326}

Mlig455_060335 {REF} {Length: 6584} {Pfam: PHD-finger [PF00628.31, score=23.6]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=21.0]} {RNA1509_29353} {RNA1310_4523} {RNA815_17419}
17. MligTC455_27736 10158 211.63 Mlig455_003904, Mlig455_008490, Mlig455_067911

Neo: -

Age: -

 0.967 - 0.967 - - - -

Mlig455_003904 {REF} {Length: 261} {NoTransDecoderORF} {RNA1509_475} {RNA1310_43281.1} {RNA815_15413.1}

Mlig455_008490 {REF} {Length: 516} {NoTransDecoderORF} {RNA1509_12154} {RNA1310_43281.1} {RNA815_15413.1}

Mlig455_067911 {REF} {Length: 583} {NoTransDecoderORF} {RNA1509_12154} {RNA1310_43281.1} {RNA815_15413.1}
18. MligTC455_32540 184 3.84 Mlig455_018323

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.322

 0.967 - - - - 0.967 - Mlig455_018323 {REF} {Length: 5951} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=60.2]} {RNA1509_43484, RNA1509_9231} {RNA1310_1476.1, RNA1509_43484, RNA1509_9231} {RNA1509_43484, RNA1509_9231, RNA815_429.1}
19. MligTC455_21772 43 0.89 Mlig455_023511, Mlig455_023557

Neo: -

Age: -

 0.965 - - - - 0.965 -

Mlig455_023511 {REF} {Length: 883} {NoTransDecoderORF} {RNA1509_58039} {RNA1310_89227} {RNA815_38499}

Mlig455_023557 {REF} {Length: 631} {NoTransDecoderORF} {RNA1509_2739} {RNA1310_89227} {RNA815_38499}
20. MligTC455_12807 2315 48.24 Mlig455_057247

Neo: -

Age: logFC(26M/2M)=-0.271

 CASP2 0.964 - - - - 0.964 - Mlig455_057247 {REF} {Length: 1726} {Pfam: Caspase domain [PF00656.24, score=118.8]} {Human: ENSG00000106144, CASP2, caspase 2, [Score=149, Expect=1e-40]} {Mouse: ENSMUSG00000029863, Casp2, caspase 2, [Score=151, Expect=1e-41]} {Dmel: FBgn0019972, Drice, Death related ICE-like caspase, [Score=103, Expect=9e-25]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [RH, Score=161, Expect=3e-47]} {Smed: dd_Smed_v6_1167_0_1, dd_Smed_v6_1167_0_1, [Score=122, Expect=5e-33]} {RNA1509_3963} {RNA1310_16575.1} {RNA815_6350.1}
21. MligTC455_28314 301 6.27 Mlig455_041681, Mlig455_070191

Neo: -

Age: -

 0.963 - - - - 0.963 -

Mlig455_041681 {REF} {Length: 5292} {Pfam: Adenovirus late L2 mu core protein (Protein X) [PF05829.14, score=23.6]} {RNA1509_28643} {RNA1310_576.1} {RNA815_2733.1}

Mlig455_070191 {REF} {Length: 961} {Pfam: Integrase core domain [PF00665.28, score=28.3]} {Smed: dd_Smed_v6_11155_0_1, dd_Smed_v6_11155_0_1, [Score=59.3, Expect=7e-11]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}
22. MligTC455_47176 360 7.51 Mlig455_023735

Neo: -

Age: Down-Down-Up

 0.963 - - - - 0.963 - Mlig455_023735 {REF} {Length: 1379} {RNA1509_25232} {RNA1310_32152.1} {RNA815_13976.1}
23. MligTC455_47339 2585 53.86 Mlig455_021460

Neo: -

Age: Down-Down-Up

 0.963 - 0.963 - - - - Mlig455_021460 {REF} {Length: 3876} {RNA1509_11352, RNA1509_20750, RNA1509_29036} {RNA1310_46975.2, RNA1509_11352, RNA1509_20750} {RNA1509_11352, RNA1509_20750, RNA815_43340}
24. MligTC455_25687 257 5.35 Mlig455_026418, Mlig455_026420, Mlig455_044772, Mlig455_053670

Neo: -

Age: logFC(26M/2M)=-1.060

 SLC7A1, SLC7A2 0.961 - - - - 0.961 -

Mlig455_026418 {REF} {Length: 1757} {Pfam: Amino acid permease [PF13520.8, score=87.9]; C-terminus of AA_permease [PF13906.8, score=78.1]; Amino acid permease [PF00324.23, score=77.2]} {Human: ENSG00000139514, SLC7A1, solute carrier family 7 member 1, [Score=357, Expect=4e-117]} {Mouse: ENSMUSG00000041313, Slc7a1, solute carrier family 7 (cationic amino acid transporter, y+ system), member 1, [Score=365, Expect=1e-120]} {Dmel: FBgn0037203, slif, slimfast, [Score=304, Expect=4e-97]} {Celegans: WBGene00015197, B0454.6, [Score=228, Expect=2e-68]} {Smed: dd_Smed_v6_16390_0_1, dd_Smed_v6_16390_0_1, [Score=190, Expect=5e-56]} {RNA1509_41407} {RNA1310_9788.2} {RNA815_3177}

Mlig455_026420 {REF} {Length: 905} {Pfam: Amino acid permease [PF13520.8, score=61.3]; Amino acid permease [PF00324.23, score=33.1]} {Human: ENSG00000003989, SLC7A2, solute carrier family 7 member 2, [Score=243, Expect=1e-75]} {Mouse: ENSMUSG00000031596, Slc7a2, solute carrier family 7 (cationic amino acid transporter, y+ system), member 2, [Score=246, Expect=4e-77]} {Dmel: FBgn0036764, CG5535, [Score=220, Expect=1e-67]} {Celegans: WBGene00016806, C50D2.2, [Score=174, Expect=8e-51]} {Smed: dd_Smed_v6_16390_0_1, dd_Smed_v6_16390_0_1, [Score=256, Expect=5e-84]} {RNA1509_41407} {RNA1310_9788.1} {RNA815_43269}

Mlig455_044772 {REF} {Length: 2667} {Pfam: Amino acid permease [PF13520.8, score=159.2]; Amino acid permease [PF00324.23, score=111.7]; C-terminus of AA_permease [PF13906.8, score=77.3]} {Human: ENSG00000139514, SLC7A1, solute carrier family 7 member 1, [RH, Score=587, Expect=0.0]; ENSG00000003989, SLC7A2, solute carrier family 7 member 2, [RH, Score=573, Expect=0.0]} {Mouse: ENSMUSG00000041313, Slc7a1, solute carrier family 7 (cationic amino acid transporter, y+ system), member 1, [RH, Score=590, Expect=0.0]; ENSMUSG00000031596, Slc7a2, solute carrier family 7 (cationic amino acid transporter, y+ system), member 2, [RH, Score=574, Expect=0.0]; ENSMUSG00000054753, AU018091, expressed sequence AU018091, [RH, Score=566, Expect=0.0]; ENSMUSG00000107871, AU018091, expressed sequence AU018091, [RH, Score=566, Expect=0.0]} {Dmel: FBgn0037203, slif, slimfast, [Score=525, Expect=3e-180]} {Celegans: WBGene00015197, B0454.6, [Score=365, Expect=2e-118]} {Smed: dd_Smed_v6_16390_0_1, dd_Smed_v6_16390_0_1, [Score=456, Expect=2e-156]} {RNA1509_41407} {RNA1310_9788.1, RNA1509_41407} {RNA1509_41407, RNA815_3177}

Mlig455_053670 {REF} {Length: 2509} {Pfam: Amino acid permease [PF13520.8, score=158.6]; Amino acid permease [PF00324.23, score=111.8]; C-terminus of AA_permease [PF13906.8, score=77.4]} {Human: ENSG00000139514, SLC7A1, solute carrier family 7 member 1, [RH, Score=586, Expect=0.0]} {Mouse: ENSMUSG00000041313, Slc7a1, solute carrier family 7 (cationic amino acid transporter, y+ system), member 1, [RH, Score=588, Expect=0.0]; ENSMUSG00000031596, Slc7a2, solute carrier family 7 (cationic amino acid transporter, y+ system), member 2, [RH, Score=576, Expect=0.0]; ENSMUSG00000107871, AU018091, expressed sequence AU018091, [RH, Score=563, Expect=0.0]; ENSMUSG00000054753, AU018091, expressed sequence AU018091, [RH, Score=563, Expect=0.0]} {Dmel: FBgn0037203, slif, slimfast, [Score=525, Expect=4e-180]} {Celegans: WBGene00015197, B0454.6, [Score=365, Expect=1e-118]} {Smed: dd_Smed_v6_16390_0_1, dd_Smed_v6_16390_0_1, [Score=456, Expect=2e-156]} {RNA1509_41407} {RNA1310_9788.1} {RNA815_3177}
25. MligTC455_41034 375 7.81 Mlig455_001164

Neo: -

Age: Down-Up-Down

 0.959 - - - - - 0.959 Mlig455_001164 {REF} {Length: 626} {NoTransDecoderORF} {RNA1509_40889} {RNA1310_48760, RNA1509_40889} {RNA1509_40889, RNA815_36110.2}
26. MligTC455_47342 79 1.64 Mlig455_024042

Neo: -

Age: -

 FMO5 0.959 - - - - - 0.959 Mlig455_024042 {REF} {Length: 2378} {TRANSSPLICED} {Pfam: Flavin-binding monooxygenase-like [PF00743.21, score=552.1]; Pyridine nucleotide-disulphide oxidoreductase [PF13738.8, score=53.8]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=39.7]; L-lysine 6-monooxygenase (NADPH-requiring) [PF13434.8, score=28.8]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=21.9]} {Human: ENSG00000131781, FMO5, flavin containing monooxygenase 5, [Score=437, Expect=6e-148]; ENSG00000094963, FMO2, flavin containing monooxygenase 2, [Score=424, Expect=6e-143]} {Mouse: ENSMUSG00000028088, Fmo5, flavin containing monooxygenase 5, [Score=469, Expect=2e-160]; ENSMUSG00000026560, Fmo9, flavin containing monooxygenase 9, [Score=454, Expect=2e-154]} {Dmel: FBgn0034943, Fmo-1, Flavin-containing monooxygenase 1, [Score=145, Expect=4e-38]} {Celegans: WBGene00001479, fmo-4, Flavin-containing monooxygenase, [RH, Score=420, Expect=3e-141]} {RNA1509_25280, RNA1509_30763} {RNA1310_18114, RNA1509_25280, RNA1509_30763} {RNA1509_25280, RNA1509_30763, RNA815_3357}
27. MligTC455_15767 171 3.56 Mlig455_051560

Neo: -

Age: logFC(26M/2M)=-0.461

Region-enriched R2: 2.630/0.01388

 0.958 - - - - 0.958 - Mlig455_051560 {REF} {Length: 3535} {RNA1509_39932} {RNA1310_8880.1} {RNA815_43831}
28. MligTC455_30270 406 8.46 Mlig455_012719, Mlig455_044289

Neo: Int S/G2/M

Age: -

Regeneration-upregulated BL: 4.823

Regeneration-enriched BL: 4.823

 0.957 - - - - 0.957 -

Mlig455_012719 {REF} {Length: 392} {RNA1509_16349} {RNA1310_2575}

Mlig455_044289 {REF} {Length: 4784} {RNA1509_16349} {RNA1310_2575} {RNA815_3500.1}
29. MligTC455_19369 174 3.62 Mlig455_027643

Neo: -

Age: -

 0.955 - - - - 0.955 - Mlig455_027643 {REF} {Length: 677} {RNA1509_8759} {RNA1310_60559} {RNA815_28038}
30. MligTC455_26285 1067 22.23 Mlig455_041966

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.613

Regeneration-enriched TP: 3.474
Regeneration-enriched BL: 3.163

 KLF18 0.955 - - - - 0.955 - Mlig455_041966 {REF} {Length: 15412} {Human: ENSG00000283039, KLF18, Kruppel like factor 18, [Score=83.2, Expect=1e-15]} {Dmel: FBgn0003374, Sgs4, Salivary gland secretion 4, [Score=79.0, Expect=1e-15]} {RNA1509_56304} {RNA1310_9089.1} {RNA815_7548.2}
31. MligTC455_27838 246 5.12 Mlig455_060678

Neo: -

Age: Down-Down-Down

Regeneration-upregulated TP: 4.727

Regeneration-enriched TP: 4.727

 TRPM1 0.955 - - - - 0.955 - Mlig455_060678 {REF} {Length: 14356} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=81.6]; Ankyrin repeats (3 copies) [PF12796.9, score=80.1]; Ankyrin repeats (many copies) [PF13857.8, score=39.8]; Ankyrin repeat [PF13606.8, score=39.5]; Ankyrin repeat [PF00023.32, score=34.0]} {Human: ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=56.2, Expect=6e-07]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=56.2, Expect=5e-07]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=56.2, Expect=4e-07]; ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=54.3, Expect=1e-06]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=55.8, Expect=4e-07]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=58.2, Expect=6e-08]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=97.1, Expect=4e-20]} {RNA1509_29189} {RNA1310_131.1} {RNA815_52.1}
32. MligTC455_30123 72 1.49 Mlig455_034831

Neo: -

Age: -

 0.955 - - - - 0.955 - Mlig455_034831 {REF} {Length: 2577} {TRANSSPLICED} {RNA1509_19670} {RNA1310_28603.1} {RNA815_23469.1}
33. MligTC455_32472 519 10.82 Mlig455_012150, Mlig455_028947

Neo: -

Age: -

 0.955 - 0.955 - - - -

Mlig455_012150 {REF} {Length: 4282} {RNA1509_16135} {RNA1310_10285, RNA1509_16135} {RNA1509_16135, RNA815_1142}

Mlig455_028947 {REF} {Length: 4339} {RNA1509_16135} {RNA1310_10285} {RNA815_1142}
34. MligTC455_42389 608 12.66 Mlig455_009287

Neo: -

Age: -

Region-enriched R2: 2.718/0.00370
Region-enriched R3: 2.286/0.01103

 0.955 - - - - 0.955 - Mlig455_009287 {REF} {Length: 1730} {RNA1310_30650} {RNA815_7716.1}
35. MligTC455_27854 108 2.26 Mlig455_038475

Neo: -

Age: -

 0.954 - - - - 0.954 - Mlig455_038475 {REF} {Length: 2901} {Pfam: Zinc knuckle [PF00098.25, score=21.6]} {RNA1509_24163} {RNA1310_131.1} {RNA815_52.1}
36. MligTC455_41923 600 12.51 Mlig455_027328

Neo: -

Age: Down-Up-Down

Region-enriched R2: 2.033/0.02987

 0.954 - - - - 0.954 - Mlig455_027328 {REF} {Length: 1845} {RNA1509_32344} {RNA1310_19859, RNA1509_32344} {RNA1509_32344, RNA815_8532}
37. MligTC455_44439 69 1.44 Mlig455_038143

Neo: -

Age: -

 0.954 - - - - 0.954 - Mlig455_038143 {REF} {Length: 2756} {Pfam: RNase H [PF00075.26, score=36.9]} {RNA1509_18097} {RNA1310_30023} {RNA815_11171.1}
38. MligTC455_30659 7438 154.97 Mlig455_008135, Mlig455_012766, Mlig455_021205, Mlig455_026385, Mlig455_035726, Mlig455_035727, Mlig455_067397, Mlig455_070688, Mlig455_070937

Neo: -

Age: Down-Up-Down

Region-enriched R8: 1.647/0.04332

 KMT5A 0.953 - 0.953 - - - -

Mlig455_008135 {REF} {Length: 3237} {RNA1509_2996} {RNA1310_18007} {RNA815_15022}

Mlig455_012766 {REF} {Length: 4660} {TRANSSPLICED} {RNA1509_2996} {RNA1310_18007} {RNA815_15022}

Mlig455_021205 {REF} {Length: 3235} {RNA1509_2996} {RNA1310_18007} {RNA815_15022}

Mlig455_026385 {REF} {Length: 2839} {TRANSSPLICED} {RNA1509_44078} {RNA1310_33930} {RNA815_15022}

Mlig455_035726 {REF} {Length: 1020} {Pfam: SET domain [PF00856.30, score=45.1]} {Human: ENSG00000183955, KMT5A, lysine methyltransferase 5A, [Score=62.4, Expect=2e-10]} {Mouse: ENSMUSG00000049327, Kmt5a, lysine methyltransferase 5A, [Score=64.7, Expect=2e-11]} {Dmel: FBgn0011474, PR-Set7, PR/SET domain containing protein 7, [Score=76.6, Expect=3e-15]} {Celegans: WBGene00004781, set-1, Histone-lysine N-methyltransferase set-1, [Score=77.0, Expect=2e-16]} {Smed: dd_Smed_v6_5677_0_1, dd_Smed_v6_5677_0_1, [Score=78.2, Expect=2e-16]} {RNA1509_2996} {RNA1310_18007} {RNA815_15022}

Mlig455_035727 {REF} {Length: 2924} {TRANSSPLICED} {RNA1509_44078} {RNA1310_31019} {RNA815_15022}

Mlig455_067397 {REF} {Length: 2535} {RNA1509_2996} {RNA1310_18007} {RNA815_15022}

Mlig455_070688 {REF} {Length: 2537} {RNA1509_2996} {RNA1310_18007, RNA1509_2996} {RNA1509_2996, RNA815_15022}

Mlig455_070937 {REF} {Length: 2433} {RNA1509_2996, RNA1509_31638} {RNA1310_18007, RNA1509_31638} {RNA1509_31638, RNA815_15022}
39. MligTC455_51246 58 1.2 Mlig455_014016

Neo: -

Age: -

 0.952 - - - - 0.952 - Mlig455_014016 {REF} {Length: 2834} {NoTransDecoderORF} {RNA1509_57004} {RNA1310_22299} {RNA815_15623}
40. MligTC455_30656 531 11.06 Mlig455_000273

Neo: -

Age: -

Region-enriched R8: 2.263/0.01198

 0.95 - 0.950 - - - - Mlig455_000273 {REF} {Length: 356} {NoTransDecoderORF} {RNA1509_2996} {RNA1310_69787} {RNA815_15022}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA