TomoSeq data search

Data search

Results for MligTC455_28955

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_28955

189

3.93

Mlig455_015887

Neo: -

Age: logFC(26M/2M)=-0.508

STOML1

Mlig455_015887 {REF} {Length: 2338} {Pfam: SPFH domain / Band 7 family [PF01145.27, score=49.2]; SCP-2 sterol transfer family [PF02036.19, score=22.5]} {Human: ENSG00000067221, STOML1, stomatin like 1, [Score=124, Expect=5e-31]} {Mouse: ENSMUSG00000032333, Stoml1, stomatin-like 1, [Score=110, Expect=4e-26]} {Dmel: FBgn0030993, Mec2, [Score=73.6, Expect=5e-14]} {Celegans: WBGene00006761, unc-24, UNC-24, [Score=89.4, Expect=3e-19]} {Smed: dd_Smed_v6_14375_0_1, dd_Smed_v6_14375_0_1, [RH, Score=77.8, Expect=2e-15]} {RNA1509_39522} {RNA1310_33751.1} {RNA815_30963}

Cumulative graph for MligTC455_28955

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.319	2.587	0.38990	1.00000
RegionR2	1.756	2.587	0.01814	0.14408
RegionR3	-0.216	2.587	0.73539	1.00000
RegionR4	-0.951	2.587	0.17326	0.43836
RegionR5	-0.131	2.587	0.80198	1.00000
RegionR6	0.001	2.587	0.99624	1.00000
RegionR7	0.271	2.587	0.72749	1.00000
RegionR8	0.589	2.587	0.52444	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-3.551	2.587	0.57063	1.00000
RegenerationR2	0.164	2.587	0.78756	0.98557
RegenerationR3	1.207	2.587	0.11961	0.53747
RegenerationR4	0.493	2.587	0.50884	0.87389
RegenerationR5	-0.122	2.587	0.86697	1.00000
RegenerationR6	0.242	2.587	0.76999	0.96205
RegenerationBL	-1.325	2.587	0.31964	0.68688
RegenerationTP	0.42	2.587	0.66924	0.99946

Genes with expression patterns similar to MligTC455_28955

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_28955	189	3.93	Mlig455_015887	Neo: - Age: logFC(26M/2M)=-0.508	STOML1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_015887 {REF} {Length: 2338} {Pfam: SPFH domain / Band 7 family [PF01145.27, score=49.2]; SCP-2 sterol transfer family [PF02036.19, score=22.5]} {Human: ENSG00000067221, STOML1, stomatin like 1, [Score=124, Expect=5e-31]} {Mouse: ENSMUSG00000032333, Stoml1, stomatin-like 1, [Score=110, Expect=4e-26]} {Dmel: FBgn0030993, Mec2, [Score=73.6, Expect=5e-14]} {Celegans: WBGene00006761, unc-24, UNC-24, [Score=89.4, Expect=3e-19]} {Smed: dd_Smed_v6_14375_0_1, dd_Smed_v6_14375_0_1, [RH, Score=77.8, Expect=2e-15]} {RNA1509_39522} {RNA1310_33751.1} {RNA815_30963}
2.	MligTC455_07911	3223	67.15	Mlig455_056355, Mlig455_056368	Neo: - Age: Down-Up-Down		0.963	-	-	-	-	-	0.963	Mlig455_056355 {REF} {Length: 1592} {Pfam: Immediate early response protein (IER) [PF05760.14, score=28.5]} {RNA1509_18831, RNA1509_32087} {RNA1310_34308, RNA1509_32087} {RNA1509_32087, RNA815_15730} Mlig455_056368 {REF} {Length: 1599} {Pfam: Immediate early response protein (IER) [PF05760.14, score=24.4]} {RNA1509_18831, RNA1509_36483} {RNA1310_34308, RNA1509_18831, RNA1509_36483} {RNA1509_18831, RNA1509_36483, RNA815_15730}
3.	MligTC455_40771	650	13.55	Mlig455_030524	Neo: - Age: -		0.96	0.960	-	-	-	-	-	Mlig455_030524 {REF} {Length: 4171} {TRANSSPLICED} {Smed: dd_Smed_v6_4196_0_1, dd_Smed_v6_4196_0_1, [RH, Score=70.9, Expect=2e-12]} {RNA1509_21134, RNA1509_9133} {RNA1310_6780, RNA1509_21134} {RNA1509_21134, RNA815_18387}
4.	MligTC455_35331	61	1.28	Mlig455_057521	Neo: - Age: Up-Down-Down, logFC(26M/2M)=0.473		0.955	-	-	0.955	-	-	-	Mlig455_057521 {REF} {Length: 3920} {NoTransDecoderORF} {RNA1509_36899} {RNA1310_12697} {RNA815_6610}
5.	MligTC455_35254	33	0.68	Mlig455_026615, Mlig455_039112	Neo: - Age: - Region-enriched R4: 5.104/0.01808		0.953	-	-	-	-	0.953	-	Mlig455_026615 {REF} {Length: 1454} {NoTransDecoderORF} {RNA1509_30139} {RNA1310_66231} {RNA815_6433.1} Mlig455_039112 {REF} {Length: 1080} {NoTransDecoderORF} {RNA1509_30139} {RNA1310_66231} {RNA815_6433.1}
6.	MligTC455_37432	1360	28.33	Mlig455_011793	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.568 Region-enriched R3: 1.726/0.00029 Region-enriched R2: 1.472/0.02738 Regeneration-depleted R6: -1.940 Regeneration-depleted R2: -1.888		0.952	-	-	-	-	0.952	-	Mlig455_011793 {REF} {Length: 3033} {RNA1509_34717} {RNA1310_23997.1} {RNA815_22988.1}

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