M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_28958

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_28958 65 1.36 Mlig455_013865, Mlig455_015686, Mlig455_020580

Neo: Irradiation

Age: Up-Down-Down

 DNAJB4, HMCN1, RTL1

Mlig455_013865 {REF} {Length: 7570} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=109.5]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=99.4]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=99.0]; Integrase zinc binding domain [PF17921.3, score=56.4]; Integrase core domain [PF00665.28, score=43.0]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=113, Expect=2e-24]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [RH, Score=497, Expect=1e-156]} {RNA1509_2552} {RNA1310_55.1} {RNA815_1085}

Mlig455_015686 {REF} {Length: 8518} {Human: ENSG00000143341, HMCN1, hemicentin 1, [Score=51.6, Expect=5e-07]} {Mouse: ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=55.1, Expect=3e-08]} {Celegans: WBGene00000082, adt-1, ADAMTS family; ADT-1, [Score=48.5, Expect=2e-06]} {Smed: dd_Smed_v6_1161_0_1, dd_Smed_v6_1161_0_1, [Score=54.3, Expect=2e-08]} {RNA1509_2552} {RNA1310_55.1} {RNA815_1085}

Mlig455_020580 {REF} {Length: 6177} {Pfam: DnaJ domain [PF00226.33, score=57.1]; Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=47.8]; BFD-like [2Fe-2S] binding domain [PF04324.17, score=18.9]} {Human: ENSG00000162616, DNAJB4, DnaJ heat shock protein family (Hsp40) member B4, [Score=57.0, Expect=3e-09]} {Mouse: ENSMUSG00000028035, Dnajb4, DnaJ heat shock protein family (Hsp40) member B4, [Score=57.0, Expect=9e-09]; ENSMUSG00000047108, Dnajb7, DnaJ heat shock protein family (Hsp40) member B7, [Score=56.6, Expect=1e-08]; ENSMUSG00000029131, Dnajb6, DnaJ heat shock protein family (Hsp40) member B6, [Score=56.6, Expect=1e-08]; ENSMUSG00000024963, Dnajc4, DnaJ heat shock protein family (Hsp40) member C4, [Score=54.7, Expect=3e-08]} {Dmel: FBgn0035852, CG7387, [Score=55.5, Expect=3e-08]} {Celegans: WBGene00001026, dnj-8, DNaJ domain (Prokaryotic heat shock protein), [Score=57.8, Expect=5e-09]} {Smed: dd_Smed_v6_12392_0_1, dd_Smed_v6_12392_0_1, [Score=56.6, Expect=1e-09]} {RNA1509_2552} {RNA1310_55.1} {RNA815_1085}

Cumulative graph for MligTC455_28958

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.305 1.668 1.00000 1.00000
RegionR2 0.333 1.668 0.71886 1.00000
RegionR3 2.053 1.668 0.13686 0.63278
RegionR4 0.424 1.668 0.69675 0.98664
RegionR5 2.693 1.668 0.02361 0.10919
RegionR6 1.019 1.668 0.45813 1.00000
RegionR7 -0.039 1.668 0.86068 1.00000
RegionR8 -4.177 1.668 0.31361 0.94586

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -2.88 1.668 0.72131 1.00000
RegenerationR2 0.165 1.668 0.87998 1.00000
RegenerationR3 -0.79 1.668 0.50798 0.85990
RegenerationR4 -0.028 1.668 0.93485 1.00000
RegenerationR5 1.138 1.668 0.21749 0.65211
RegenerationR6 0.403 1.668 0.73808 0.94609
RegenerationBL -2.002 1.668 0.98809 1.00000
RegenerationTP 1.587 1.668 0.50632 0.90415


Genes with expression patterns similar to MligTC455_28958

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_28958 65 1.36 Mlig455_013865, Mlig455_015686, Mlig455_020580

Neo: Irradiation

Age: Up-Down-Down

 DNAJB4, HMCN1, RTL1 5 - 1.000 1.000 1.000 1.000 1.000

Mlig455_013865 {REF} {Length: 7570} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=109.5]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=99.4]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=99.0]; Integrase zinc binding domain [PF17921.3, score=56.4]; Integrase core domain [PF00665.28, score=43.0]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=113, Expect=2e-24]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [RH, Score=497, Expect=1e-156]} {RNA1509_2552} {RNA1310_55.1} {RNA815_1085}

Mlig455_015686 {REF} {Length: 8518} {Human: ENSG00000143341, HMCN1, hemicentin 1, [Score=51.6, Expect=5e-07]} {Mouse: ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=55.1, Expect=3e-08]} {Celegans: WBGene00000082, adt-1, ADAMTS family; ADT-1, [Score=48.5, Expect=2e-06]} {Smed: dd_Smed_v6_1161_0_1, dd_Smed_v6_1161_0_1, [Score=54.3, Expect=2e-08]} {RNA1509_2552} {RNA1310_55.1} {RNA815_1085}

Mlig455_020580 {REF} {Length: 6177} {Pfam: DnaJ domain [PF00226.33, score=57.1]; Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=47.8]; BFD-like [2Fe-2S] binding domain [PF04324.17, score=18.9]} {Human: ENSG00000162616, DNAJB4, DnaJ heat shock protein family (Hsp40) member B4, [Score=57.0, Expect=3e-09]} {Mouse: ENSMUSG00000028035, Dnajb4, DnaJ heat shock protein family (Hsp40) member B4, [Score=57.0, Expect=9e-09]; ENSMUSG00000047108, Dnajb7, DnaJ heat shock protein family (Hsp40) member B7, [Score=56.6, Expect=1e-08]; ENSMUSG00000029131, Dnajb6, DnaJ heat shock protein family (Hsp40) member B6, [Score=56.6, Expect=1e-08]; ENSMUSG00000024963, Dnajc4, DnaJ heat shock protein family (Hsp40) member C4, [Score=54.7, Expect=3e-08]} {Dmel: FBgn0035852, CG7387, [Score=55.5, Expect=3e-08]} {Celegans: WBGene00001026, dnj-8, DNaJ domain (Prokaryotic heat shock protein), [Score=57.8, Expect=5e-09]} {Smed: dd_Smed_v6_12392_0_1, dd_Smed_v6_12392_0_1, [Score=56.6, Expect=1e-09]} {RNA1509_2552} {RNA1310_55.1} {RNA815_1085}
2. MligTC455_28957 208 4.33 Mlig455_020247, Mlig455_071156

Neo: Irradiation

Age: logFC(26M/2M)=0.933

 DNAJB4, RTL1 3.545 - - 0.920 0.709 0.938 0.978

Mlig455_020247 {REF} {Length: 8180} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=109.6]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=99.3]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=99.1]; Integrase zinc binding domain [PF17921.3, score=56.5]; Integrase core domain [PF00665.28, score=43.0]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=112, Expect=3e-24]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [RH, Score=498, Expect=5e-157]} {RNA1509_2552} {RNA1310_55.1} {RNA815_1085}

Mlig455_071156 {REF} {Length: 8209} {Pfam: DnaJ domain [PF00226.33, score=56.6]; Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=46.4]} {Human: ENSG00000162616, DNAJB4, DnaJ heat shock protein family (Hsp40) member B4, [Score=57.0, Expect=3e-09]} {Mouse: ENSMUSG00000028035, Dnajb4, DnaJ heat shock protein family (Hsp40) member B4, [Score=57.0, Expect=8e-09]; ENSMUSG00000047108, Dnajb7, DnaJ heat shock protein family (Hsp40) member B7, [Score=57.0, Expect=9e-09]; ENSMUSG00000029131, Dnajb6, DnaJ heat shock protein family (Hsp40) member B6, [Score=56.6, Expect=9e-09]; ENSMUSG00000024963, Dnajc4, DnaJ heat shock protein family (Hsp40) member C4, [Score=54.7, Expect=3e-08]} {Dmel: FBgn0035852, CG7387, [Score=55.5, Expect=3e-08]} {Celegans: WBGene00001026, dnj-8, DNaJ domain (Prokaryotic heat shock protein), [Score=58.2, Expect=4e-09]} {Smed: dd_Smed_v6_12392_0_1, dd_Smed_v6_12392_0_1, [Score=56.6, Expect=1e-09]} {RNA1509_15195, RNA1509_18735, RNA1509_2552, RNA1509_37766} {RNA1310_55.1, RNA1509_15195, RNA1509_18735, RNA1509_2552, RNA1509_37766} {RNA1509_15195, RNA1509_18735, RNA1509_2552, RNA1509_37766, RNA815_1085}
3. MligTC455_29866 70 1.46 Mlig455_008787, Mlig455_068946

Neo: Irradiation

Age: Up-Down-Down

 MSH6 2.824 - - 0.944 - 0.923 0.957

Mlig455_008787 {REF} {Length: 10819} {TRANSSPLICED} {Pfam: MutS domain I [PF01624.22, score=121.8]; MutS domain III [PF05192.20, score=79.3]; PWWP domain [PF00855.19, score=51.3]; MutS domain II [PF05188.19, score=27.8]} {Human: ENSG00000116062, MSH6, mutS homolog 6, [Score=544, Expect=2e-177]} {Mouse: ENSMUSG00000005370, Msh6, mutS homolog 6, [Score=563, Expect=0.0]} {Dmel: FBgn0036486, Msh6, [Score=417, Expect=2e-128]} {Celegans: WBGene00003422, msh-6, MSH (MutS Homolog) family, [Score=409, Expect=2e-125]} {Smed: dd_Smed_v6_15463_0_2, dd_Smed_v6_15463_0_2, [Score=466, Expect=8e-150]} {RNA1509_2552, RNA1509_40096} {RNA1310_55.1, RNA1509_40096} {RNA1509_40096, RNA815_1085}

Mlig455_068946 {REF} {Length: 697} {Pfam: Integrase core domain [PF00665.28, score=38.6]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=126, Expect=2e-34]} {RNA1509_2552} {RNA1310_55.1} {RNA815_1085}
4. MligTC455_28956 70 1.47 Mlig455_019522

Neo: -

Age: Up-Down-Down

 2.811 - - 0.900 - 0.929 0.982 Mlig455_019522 {REF} {Length: 7605} {Pfam: Zinc knuckle [PF00098.25, score=30.0]; Eukaryotic translation initiation factor 3 subunit G [PF12353.10, score=20.0]} {Smed: dd_Smed_v6_10279_0_1, dd_Smed_v6_10279_0_1, [Score=48.9, Expect=6e-07]} {RNA1509_2552} {RNA1310_55.1} {RNA815_1085}
5. MligTC455_29342 150 3.13 Mlig455_025176, Mlig455_025188

Neo: -

Age: Up-Down-Up

Region-enriched R2: 4.014/0.03070

 2.791 - - 0.913 - 0.903 0.975

Mlig455_025176 {REF} {Length: 2991} {RNA1509_18735} {RNA1310_76847} {RNA815_13499.1}

Mlig455_025188 {REF} {Length: 2991} {RNA1509_18735} {RNA1310_76847} {RNA815_13499.1}
6. MligTC455_12690 30 0.62 Mlig455_013764

Neo: Irradiation

Age: Up-Down-Down

 2.689 - - 0.786 - 0.936 0.967 Mlig455_013764 {REF} {Length: 1033} {RNA1310_40888}
7. MligTC455_32692 101 2.1 Mlig455_027689, Mlig455_028092, Mlig455_038546, Mlig455_039196, Mlig455_039197, Mlig455_041117, Mlig455_050844, Mlig455_054359, Mlig455_069646

Neo: Irradiation

Age: Up-Down-Down

 NYNRIN, RTL1 1.837 - - - - 0.956 0.881

Mlig455_027689 {REF} {Length: 2645} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=123.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=119.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=83.3]; Integrase core domain [PF00665.28, score=23.8]; Integrase core domain [PF13683.8, score=21.0]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=80.1, Expect=1e-14]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=87.0, Expect=5e-17]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=86.7, Expect=7e-17]; ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=86.7, Expect=7e-17]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=285, Expect=1e-86]} {RNA1509_35014} {RNA1310_1636} {RNA815_24693}

Mlig455_028092 {REF} {Length: 4721} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=122.7]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=118.5]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=83.4]; Integrase zinc binding domain [PF17921.3, score=78.0]; SCAN domain [PF02023.19, score=53.2]; Retroviral aspartyl protease [PF00077.22, score=28.6]; Integrase core domain [PF00665.28, score=24.9]; Integrase core domain [PF13683.8, score=20.0]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=107, Expect=1e-22]} {Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=89.0, Expect=4e-17]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=89.0, Expect=4e-17]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=284, Expect=2e-83]} {RNA1509_37360} {RNA1310_1636, RNA1509_37360} {RNA1509_37360, RNA815_16797}

Mlig455_038546 {REF} {Length: 1206} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=126.0]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=121.2]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=33.0]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=75.1, Expect=2e-14]} {Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=87.4, Expect=9e-19]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=87.4, Expect=9e-19]} {Smed: dd_Smed_v6_15498_0_18, dd_Smed_v6_15498_0_18, [Score=197, Expect=5e-61]} {RNA1509_35014} {RNA1310_1636} {RNA815_24693}

Mlig455_039196 {REF} {Length: 346} {NoTransDecoderORF} {RNA1509_2515} {RNA1310_23566} {RNA815_3258.1}

Mlig455_039197 {REF} {Length: 657} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=123.4]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=123.2]} {Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=50.1, Expect=3e-07]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=50.1, Expect=3e-07]} {Smed: dd_Smed_v6_15498_0_18, dd_Smed_v6_15498_0_18, [Score=131, Expect=1e-37]} {RNA1509_37360} {RNA1310_1636} {RNA815_24693}

Mlig455_041117 {REF} {Length: 1170} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=125.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=121.5]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=29.7]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=75.5, Expect=1e-14]} {Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=89.7, Expect=1e-19]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=89.7, Expect=1e-19]} {Smed: dd_Smed_v6_15498_0_18, dd_Smed_v6_15498_0_18, [Score=201, Expect=1e-62]} {RNA1509_35014} {RNA1310_1636} {RNA815_24693}

Mlig455_050844 {REF} {Length: 4724} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=115.4]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=109.3]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=50.0]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=70.5, Expect=9e-13]} {Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=80.1, Expect=3e-16]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=80.1, Expect=3e-16]} {Smed: dd_Smed_v6_15498_0_18, dd_Smed_v6_15498_0_18, [Score=190, Expect=3e-58]} {RNA1509_37360} {RNA1310_1636} {RNA815_16797}

Mlig455_054359 {REF} {Length: 4717} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=123.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=101.9]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=84.3]; Integrase zinc binding domain [PF17921.3, score=78.7]; Integrase core domain [PF00665.28, score=25.5]; Integrase core domain [PF13683.8, score=21.1]; H2C2 zinc finger [PF09337.12, score=19.7]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=108, Expect=2e-23]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=119, Expect=1e-26]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=285, Expect=8e-86]} {RNA1509_37360} {RNA1310_1636} {RNA815_16797}

Mlig455_069646 {REF} {Length: 1946} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=119.3]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=79.5]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=32.0]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=72.4, Expect=2e-12]} {Mouse: ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=79.0, Expect=1e-14]; ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=79.0, Expect=1e-14]} {Smed: dd_Smed_v6_15498_0_18, dd_Smed_v6_15498_0_18, [Score=157, Expect=7e-43]} {RNA1509_35014} {RNA1310_1636} {RNA815_24693}
8. MligTC455_03193 44 0.92 Mlig455_049556, Mlig455_056822, Mlig455_056823, Mlig455_069856

Neo: -

Age: Down-Up-Down

Region-enriched R5: 5.241/0.03646

 1.819 - - 0.855 - - 0.964

Mlig455_049556 {REF} {Length: 232} {NoTransDecoderORF} {RNA1310_92110} {RNA815_55500}

Mlig455_056822 {REF} {Length: 951} {Pfam: CCDC144C protein coiled-coil region [PF14915.8, score=20.7]} {RNA1310_62374} {RNA815_55500}

Mlig455_056823 {REF} {Length: 1075} {Pfam: CCDC144C protein coiled-coil region [PF14915.8, score=20.7]} {RNA1310_62374} {RNA815_55500}

Mlig455_069856 {REF} {Length: 1026} {Pfam: CCDC144C protein coiled-coil region [PF14915.8, score=20.5]} {RNA1310_62374} {RNA815_55500}
9. MligTC455_14941 37 0.78 Mlig455_045502

Neo: -

Age: Up-Up-Down

 1.793 - - 0.836 - - 0.957 Mlig455_045502 {REF} {Length: 5086} {RNA1509_39915, RNA1509_47199} {RNA1310_14234, RNA1509_39915, RNA1509_47199} {RNA1509_39915, RNA1509_47199, RNA815_21867}
10. MligTC455_23202 2035 42.39 Mlig455_049148, Mlig455_049198

Neo: -

Age: Down-Down-Up

Region-enriched R3: 7.168/0.00000
Region-enriched R2: 4.894/0.01000

 1.769 - 0.964 - 0.805 - -

Mlig455_049148 {REF} {Length: 686} {Pfam: CUB domain [PF00431.22, score=29.6]} {Celegans: WBGene00008596, clec-54, C-type LECtin, [Score=44.3, Expect=1e-05]} {RNA1509_15319, RNA1509_26181} {RNA1310_56206, RNA1509_15319, RNA1509_26181} {RNA1509_15319, RNA1509_26181, RNA815_28296}

Mlig455_049198 {REF} {Length: 687} {Pfam: CUB domain [PF00431.22, score=29.3]} {Celegans: WBGene00008596, clec-54, C-type LECtin, [Score=44.3, Expect=1e-05]} {RNA1509_29109} {RNA1310_56206, RNA1509_29109} {RNA1509_29109, RNA815_28296}
11. MligTC455_35982 1405 29.27 Mlig455_009323, Mlig455_022837, Mlig455_022838, Mlig455_037709, Mlig455_042292, Mlig455_044783, Mlig455_052915, Mlig455_054665, Mlig455_055175, Mlig455_061419, Mlig455_063453, Mlig455_070549

Neo: Germline

Age: logFC(26M/2M)=0.698

Region-enriched R5: 4.319/0.01846

 1.758 - - 0.796 - - 0.962

Mlig455_009323 {REF} {Length: 486} {RNA1509_17965} {RNA1310_91224.1} {RNA815_48050.1}

Mlig455_022837 {REF} {Length: 1215} {Pfam: Endonuclease-reverse transcriptase [PF14529.8, score=67.0]; Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=45.0]} {RNA1509_30354} {RNA1310_91224.1} {RNA815_48050.1}

Mlig455_022838 {REF} {Length: 1533} {Pfam: RNase H [PF00075.26, score=49.9]; Reverse transcriptase-like [PF13456.8, score=22.0]} {RNA1509_53488} {RNA1310_43206} {RNA815_37912}

Mlig455_037709 {REF} {Length: 1046} {RNA1509_30354} {RNA1310_37492} {RNA815_48050.1}

Mlig455_042292 {REF} {Length: 1640} {Pfam: Subunit CCDC53 of WASH complex [PF10152.11, score=19.3]} {RNA1509_17965} {RNA1310_37492} {RNA815_48050.1}

Mlig455_044783 {REF} {Length: 488} {RNA1509_17965} {RNA1310_91224.1} {RNA815_48050.1}

Mlig455_052915 {REF} {Length: 373} {RNA1509_30354} {RNA1310_91224.1} {RNA815_48050.1}

Mlig455_054665 {REF} {Length: 485} {Pfam: RNase H [PF00075.26, score=54.6]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=30.8]; Protein of unknown function (DUF2722) [PF10846.10, score=26.8]; Photosynthesis affected mutant 68 [PF11947.10, score=21.5]; Reverse transcriptase-like [PF13456.8, score=21.2]} {RNA1509_17965} {RNA1310_91224.1} {RNA815_48050.1}

Mlig455_055175 {REF} {Length: 491} {Pfam: RNase H [PF00075.26, score=54.6]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=30.8]; Protein of unknown function (DUF2722) [PF10846.10, score=26.8]; Photosynthesis affected mutant 68 [PF11947.10, score=21.5]; Reverse transcriptase-like [PF13456.8, score=21.2]} {RNA1509_17965, RNA1509_18260} {RNA1310_91224.1, RNA1509_18260} {RNA1509_18260, RNA815_48050.1}

Mlig455_061419 {REF} {Length: 441} {Pfam: Subunit CCDC53 of WASH complex [PF10152.11, score=19.3]} {RNA1509_17965} {RNA1310_91224.1} {RNA815_48050.1}

Mlig455_063453 {REF} {Length: 458} {Pfam: Subunit CCDC53 of WASH complex [PF10152.11, score=19.3]} {RNA1509_17965} {RNA1310_91224.1} {RNA815_48050.1}

Mlig455_070549 {REF} {Length: 511} {RNA1509_17965} {RNA1310_91224.1} {RNA815_48050.1}
12. MligTC455_47735 70 1.45 Mlig455_054644

Neo: -

Age: -

Region-enriched R3: 5.950/0.00023

 1.741 - 0.953 - 0.788 - - Mlig455_054644 {REF} {Length: 804} {Pfam: Domain of unknown function (DUF4573) [PF15140.8, score=37.7]} {RNA1509_39145} {RNA1310_42379.1} {RNA815_34286.1}
13. MligTC455_42359 50 1.05 Mlig455_006820, Mlig455_038432, Mlig455_038569

Neo: -

Age: Up-Down-Up

 1.72 - 0.769 - - 0.951 -

Mlig455_006820 {REF} {Length: 1439} {Smed: dd_Smed_v6_15433_0_1, dd_Smed_v6_15433_0_1, [Score=58.9, Expect=1e-09]} {RNA1310_86618}

Mlig455_038432 {REF} {Length: 5209} {Smed: dd_Smed_v6_15433_0_1, dd_Smed_v6_15433_0_1, [Score=68.2, Expect=3e-11]} {RNA1509_41513} {RNA1310_34666} {RNA815_60037}

Mlig455_038569 {REF} {Length: 716} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_46306}
14. MligTC455_36020 1311 27.3 Mlig455_018390

Neo: -

Age: Down-Down-Up

Region-enriched R3: 5.222/0.00000
Region-enriched R2: 4.515/0.00230

 1.701 - 0.959 - 0.742 - - Mlig455_018390 {REF} {Length: 1439} {RNA1509_748} {RNA1310_90094, RNA1509_748} {RNA1509_748, RNA815_23687}
15. MligTC455_30754 12 0.25 Mlig455_007877

Neo: Germline

Age: Down-Down-Down

 NYNRIN 0.973 - - - - 0.973 - Mlig455_007877 {REF} {Length: 4733} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=123.3]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=119.1]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=83.4]; Integrase zinc binding domain [PF17921.3, score=74.9]; SCAN domain [PF02023.19, score=50.0]; Retroviral aspartyl protease [PF00077.22, score=26.9]; Integrase core domain [PF00665.28, score=21.8]; Integrase core domain [PF13683.8, score=19.9]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=105, Expect=6e-22]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=116, Expect=2e-25]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=288, Expect=7e-85]} {RNA1509_37360} {RNA1310_1636} {RNA815_16797}
16. MligTC455_43192 420 8.75 Mlig455_010853, Mlig455_010884

Neo: -

Age: -

Region-enriched R3: 5.568/0.01380

 0.972 - 0.972 - - - -

Mlig455_010853 {REF} {Length: 897} {RNA1310_121983}

Mlig455_010884 {REF} {Length: 898} {RNA1310_121983}
17. MligTC455_12237 17 0.35 Mlig455_003548

Neo: Irradiation

Age: Down-Down-Down, logFC(26M/2M)=-0.612

 PDP2 0.971 - - - - 0.971 - Mlig455_003548 {REF} {Length: 2902} {Pfam: Protein phosphatase 2C [PF00481.23, score=58.2]} {Human: ENSG00000172840, PDP2, pyruvate dehyrogenase phosphatase catalytic subunit 2, [Score=100, Expect=8e-22]; ENSG00000164951, PDP1, pyruvate dehyrogenase phosphatase catalytic subunit 1, [Score=97.4, Expect=8e-21]} {Mouse: ENSMUSG00000049225, Pdp1, pyruvate dehyrogenase phosphatase catalytic subunit 1, [Score=97.4, Expect=5e-21]} {Dmel: FBgn0029958, Pdp, Pyruvate dehydrogenase phosphatase, [Score=109, Expect=3e-25]} {Celegans: WBGene00022832, pdp-1, Pyruvate Dehydrogenase Phosphatase homolog, [Score=95.5, Expect=7e-21]} {Smed: dd_Smed_v6_4201_0_1, dd_Smed_v6_4201_0_1, [Score=120, Expect=1e-30]} {RNA1509_48674} {RNA1310_14443} {RNA815_18993}
18. MligTC455_27152 4844 100.91 Mlig455_010172

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-1.696

Region-enriched R3: 6.428/0.00000
Region-enriched R2: 6.057/0.00024

 SEL1L3 0.971 - 0.971 - - - - Mlig455_010172 {REF} {Length: 3493} {Pfam: Sel1 repeat [PF08238.14, score=40.6]; Concanavalin A-like lectin/glucanases superfamily [PF13385.8, score=19.4]} {Human: ENSG00000091490, SEL1L3, SEL1L family member 3, [Score=234, Expect=4e-63]} {Mouse: ENSMUSG00000029189, Sel1l3, sel-1 suppressor of lin-12-like 3 (C. elegans), [Score=237, Expect=5e-64]} {Dmel: FBgn0028475, Hrd3, HMG-coA reductase degradation 3, [Score=64.3, Expect=5e-10]} {Celegans: WBGene00004759, sel-1, SEL-1; Suppressor/Enhancer of Lin-12, [Score=68.2, Expect=2e-11]} {Smed: dd_Smed_v6_7527_0_2, dd_Smed_v6_7527_0_2, [Score=315, Expect=2e-91]} {RNA1509_21264} {RNA1310_3921} {RNA815_11098}
19. MligTC455_43193 359 7.49 Mlig455_033211

Neo: -

Age: -

 0.971 - 0.971 - - - - Mlig455_033211 {REF} {Length: 280} {NoTransDecoderORF} {RNA1310_121983}
20. MligTC455_27171 6125 127.61 Mlig455_010135

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.929

Region-enriched R3: 5.685/0.00000
Region-enriched R2: 5.498/0.00007

 0.97 - 0.970 - - - - Mlig455_010135 {REF} {Length: 854} {Pfam: Domain of unknown function (DUF4576) [PF15144.8, score=20.1]} {RNA1509_25486} {RNA1310_54429.2, RNA1509_25486} {RNA1509_25486, RNA815_7257.4}
21. MligTC455_27172 6085 126.78 Mlig455_010168

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-1.970

Region-enriched R3: 5.854/0.00000
Region-enriched R2: 5.648/0.00003

 0.97 - 0.970 - - - - Mlig455_010168 {REF} {Length: 844} {RNA1509_14337, RNA1509_21076, RNA1509_6051} {RNA1310_54429.1, RNA1509_14337, RNA1509_21076, RNA1509_6051} {RNA1509_14337, RNA1509_21076, RNA1509_6051, RNA815_23191}
22. MligTC455_27131 3362 70.04 Mlig455_010170

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-1.893

Region-enriched R3: 6.424/0.00000
Region-enriched R2: 5.578/0.00015

 0.969 - 0.969 - - - - Mlig455_010170 {REF} {Length: 578} {RNA1509_3816} {RNA1310_105811} {RNA815_7257.6}
23. MligTC455_27135 6448 134.32 Mlig455_010165

Neo: -

Age: logFC(26M/2M)=-1.751

Region-enriched R3: 5.523/0.00000
Region-enriched R2: 5.495/0.00004

 0.969 - 0.969 - - - - Mlig455_010165 {REF} {Length: 547} {RNA1509_2000} {RNA1310_57659} {RNA815_27379}
24. MligTC455_27136 12962 270.04 Mlig455_010130, Mlig455_010231

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-1.817

Region-enriched R3: 5.515/0.00000
Region-enriched R2: 5.440/0.00002

 0.969 - 0.969 - - - -

Mlig455_010130 {REF} {Length: 753} {RNA1509_906} {RNA1310_57659} {RNA815_27379}

Mlig455_010231 {REF} {Length: 423} {RNA1509_13891, RNA1509_906} {RNA1310_57659, RNA1509_13891} {RNA1509_13891, RNA815_27379}
25. MligTC455_27144 3959 82.47 Mlig455_010234

Neo: -

Age: logFC(26M/2M)=-2.003

Region-enriched R3: 6.983/0.00000
Region-enriched R2: 5.555/0.00267

 0.969 - 0.969 - - - - Mlig455_010234 {REF} {Length: 439} {RNA1509_34122, RNA1509_54249, RNA1509_5614} {RNA1310_56673, RNA1509_34122, RNA1509_54249, RNA1509_5614} {RNA1509_34122, RNA1509_54249, RNA1509_5614, RNA815_23606.1}
26. MligTC455_27146 4781 99.61 Mlig455_010131

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-2.192

Region-enriched R3: 6.873/0.00000
Region-enriched R2: 6.658/0.00009

 0.969 - 0.969 - - - - Mlig455_010131 {REF} {Length: 105} {NoTransDecoderORF} {RNA1509_1301} {RNA1310_108580} {RNA815_7257.1}
27. MligTC455_27149 162 3.38 Mlig455_010166

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-2.585

Region-enriched R3: 5.671/0.00012
Region-enriched R2: 4.829/0.04858

 0.969 - 0.969 - - - - Mlig455_010166 {REF} {Length: 595} {RNA1509_40054} {RNA1310_45578.1} {RNA815_7257.5}
28. MligTC455_27150 7792 162.33 Mlig455_010171, Mlig455_010239

Neo: -

Age: logFC(26M/2M)=-1.698

Region-enriched R3: 5.463/0.00000
Region-enriched R2: 4.066/0.00238

 0.969 - 0.969 - - - -

Mlig455_010171 {REF} {Length: 6198} {Pfam: SAP domain [PF02037.29, score=29.5]} {RNA1509_54462, RNA1509_8096} {RNA1310_3502, RNA1509_54462} {RNA1509_54462, RNA815_801}

Mlig455_010239 {REF} {Length: 2710} {RNA1509_8096} {RNA1310_3502} {RNA815_39543}
29. MligTC455_27151 2425 50.53 Mlig455_010141

Neo: Int S/G2/M

Age: logFC(26M/2M)=-1.620

Region-enriched R3: 6.747/0.00000
Region-enriched R2: 6.319/0.00053

 0.969 - 0.969 - - - - Mlig455_010141 {REF} {Length: 873} {RNA1509_6591} {RNA1310_101555} {RNA815_33850}
30. MligTC455_00922 1 0.02 Mlig455_060839

Neo: -

Age: -

 0.968 - - - - - 0.968 Mlig455_060839 {REF} {Length: 488} {RNA1509_40661} {RNA1310_12689.2} {RNA815_44840}
31. MligTC455_01779 3 0.06 Mlig455_038139, Mlig455_039804

Neo: -

Age: -

 0.968 - - - - - 0.968

Mlig455_038139 {REF} {Length: 597} {Pfam: Interleukin-4 receptor alpha chain, N-terminal [PF09238.12, score=21.1]}

Mlig455_039804 {REF} {Length: 537} {Pfam: Interleukin-4 receptor alpha chain, N-terminal [PF09238.12, score=19.9]}
32. MligTC455_06994 9 0.18 Mlig455_019650

Neo: -

Age: -

 0.968 - - - - - 0.968 Mlig455_019650 {REF} {Length: 1165} {TRANSSPLICED} {RNA1310_29294} {RNA815_25557}
33. MligTC455_06995 7 0.15 Mlig455_070826

Neo: -

Age: Up-Down-Down

 0.968 - - - - - 0.968 Mlig455_070826 {REF} {Length: 1159} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF 659) [PF04937.17, score=40.5]} {Celegans: WBGene00015662, C10A4.1, [Score=69.3, Expect=2e-13]} {RNA1310_29294} {RNA815_25557}
34. MligTC455_07545 14 0.29 Mlig455_001083

Neo: -

Age: -

 0.968 - - - - - 0.968 Mlig455_001083 {REF} {Length: 859} {NoTransDecoderORF} {RNA1509_51478} {RNA1310_121350} {RNA815_4833.2}
35. MligTC455_09780 3 0.06 Mlig455_040799

Neo: -

Age: -

 0.968 - 0.968 - - - - Mlig455_040799 {REF} {Length: 811}
36. MligTC455_11098 12 0.25 Mlig455_018329

Neo: -

Age: -

 0.968 - 0.968 - - - - Mlig455_018329 {REF} {Length: 1443} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=34.8]} {Smed: dd_Smed_v6_31564_0_1, dd_Smed_v6_31564_0_1, [Score=77.0, Expect=1e-15]} {RNA1310_17047.1} {RNA815_33028}
37. MligTC455_12359 34 0.71 Mlig455_036860, Mlig455_053000

Neo: -

Age: -

 0.968 - 0.968 - - - -

Mlig455_036860 {REF} {Length: 2052} {Pfam: Ammonium Transporter Family [PF00909.23, score=351.9]} {Dmel: FBgn0038309, Amt, Ammonium transporter, [Score=177, Expect=1e-48]} {Celegans: WBGene00000136, amt-4, Ammonium transporter, [Score=361, Expect=7e-119]} {RNA1310_63464} {RNA815_52017}

Mlig455_053000 {REF} {Length: 2052} {Pfam: Ammonium Transporter Family [PF00909.23, score=351.9]} {Dmel: FBgn0038309, Amt, Ammonium transporter, [Score=177, Expect=1e-48]} {Celegans: WBGene00000136, amt-4, Ammonium transporter, [Score=361, Expect=7e-119]} {RNA1310_63464} {RNA815_52017}
38. MligTC455_17579 76 1.58 Mlig455_042836, Mlig455_045854, Mlig455_045870

Neo: -

Age: -

 RNF217 0.968 - 0.968 - - - -

Mlig455_042836 {REF} {Length: 3004} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=75.3]} {Human: ENSG00000146373, RNF217, ring finger protein 217, [Score=83.6, Expect=5e-16]} {Mouse: ENSMUSG00000063760, Rnf217, ring finger protein 217, [Score=83.2, Expect=4e-16]} {Dmel: FBgn0036082, CG12362, [Score=57.0, Expect=4e-08]} {Celegans: WBGene00020462, T12E12.1, Potential E3 ubiquitin-protein ligase ariadne-2, [Score=57.0, Expect=4e-08]} {Smed: dd_Smed_v6_7986_0_1, dd_Smed_v6_7986_0_1, [Score=61.2, Expect=1e-09]} {RNA1310_42946} {RNA815_24345}

Mlig455_045854 {REF} {Length: 3004} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=74.7]} {Human: ENSG00000146373, RNF217, ring finger protein 217, [Score=83.2, Expect=5e-16]} {Mouse: ENSMUSG00000063760, Rnf217, ring finger protein 217, [Score=83.2, Expect=4e-16]} {Dmel: FBgn0036082, CG12362, [Score=57.4, Expect=3e-08]} {Celegans: WBGene00020462, T12E12.1, Potential E3 ubiquitin-protein ligase ariadne-2, [Score=57.8, Expect=2e-08]} {Smed: dd_Smed_v6_7986_0_1, dd_Smed_v6_7986_0_1, [Score=61.2, Expect=1e-09]} {RNA1310_42946} {RNA815_24345}

Mlig455_045870 {REF} {Length: 3004} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=74.9]} {Human: ENSG00000146373, RNF217, ring finger protein 217, [Score=83.2, Expect=5e-16]} {Mouse: ENSMUSG00000063760, Rnf217, ring finger protein 217, [Score=83.2, Expect=4e-16]} {Dmel: FBgn0036082, CG12362, [Score=57.4, Expect=3e-08]} {Celegans: WBGene00020462, T12E12.1, Potential E3 ubiquitin-protein ligase ariadne-2, [Score=57.0, Expect=4e-08]} {Smed: dd_Smed_v6_7986_0_1, dd_Smed_v6_7986_0_1, [Score=61.2, Expect=1e-09]} {RNA1310_42946} {RNA815_24345}
39. MligTC455_18009 6 0.13 Mlig455_029193

Neo: -

Age: -

 0.968 - 0.968 - - - - Mlig455_029193 {REF} {Length: 475}
40. MligTC455_19911 3456 72.01 Mlig455_010146

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.657

Region-enriched R3: 6.134/0.00000
Region-enriched R2: 5.918/0.00015

 0.968 - 0.968 - - - - Mlig455_010146 {REF} {Length: 497} {RNA1509_40525} {RNA1310_91403} {RNA815_34947.3}
41. MligTC455_22400 2410 50.2 Mlig455_049145

Neo: -

Age: logFC(26M/2M)=0.314

Region-enriched R3: 6.393/0.00000

 0.968 - 0.968 - - - - Mlig455_049145 {REF} {Length: 929} {RNA1509_6763, RNA1509_7997} {RNA1310_46088, RNA1509_6763, RNA1509_7997} {RNA1509_6763, RNA1509_7997, RNA815_22985}
42. MligTC455_22686 26 0.55 Mlig455_000566, Mlig455_030366

Neo: -

Age: -

 GRIK3 0.968 - 0.968 - - - -

Mlig455_000566 {REF} {Length: 2943} {Pfam: Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=78.1]; Ligand-gated ion channel [PF00060.28, score=52.0]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=48.7]} {Human: ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=157, Expect=5e-39]; ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [Score=154, Expect=6e-38]; ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=154, Expect=7e-38]} {Mouse: ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=152, Expect=2e-37]; ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=151, Expect=4e-37]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=150, Expect=4e-37]; ENSMUSG00000003378, Grik5, glutamate receptor, ionotropic, kainate 5 (gamma 2), [Score=145, Expect=2e-35]} {Dmel: FBgn0039916, Ekar, Eye-enriched kainate receptor, [Score=147, Expect=4e-36]} {Celegans: WBGene00001614, glr-3, GLutamate Receptor family (AMPA), [Score=137, Expect=4e-33]} {Smed: dd_Smed_v6_22973_0_1, dd_Smed_v6_22973_0_1, [Score=155, Expect=5e-39]} {RNA1310_20394.1} {RNA815_45848}

Mlig455_030366 {REF} {Length: 2933} {Pfam: Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=78.1]; Ligand-gated ion channel [PF00060.28, score=51.5]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=48.7]} {Human: ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=157, Expect=4e-39]; ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [Score=154, Expect=5e-38]; ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=152, Expect=2e-37]} {Mouse: ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=151, Expect=4e-37]; ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=150, Expect=5e-37]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=150, Expect=4e-37]; ENSMUSG00000003378, Grik5, glutamate receptor, ionotropic, kainate 5 (gamma 2), [Score=145, Expect=3e-35]; ENSMUSG00000032017, Grik4, glutamate receptor, ionotropic, kainate 4, [Score=144, Expect=9e-35]} {Dmel: FBgn0039916, Ekar, Eye-enriched kainate receptor, [Score=147, Expect=5e-36]} {Celegans: WBGene00001614, glr-3, GLutamate Receptor family (AMPA), [Score=137, Expect=5e-33]} {Smed: dd_Smed_v6_22973_0_1, dd_Smed_v6_22973_0_1, [Score=154, Expect=1e-38]} {RNA1310_20394.1} {RNA815_45848}
43. MligTC455_24612 12 0.25 Mlig455_000425, Mlig455_000489, Mlig455_000526, Mlig455_024858

Neo: -

Age: -

 SCN1A 0.968 - 0.968 - - - -

Mlig455_000425 {REF} {Length: 2186} {Pfam: Ion transport protein [PF00520.33, score=296.1]; Voltage-dependent L-type calcium channel, IQ-associated [PF16905.7, score=31.9]; Polycystin cation channel [PF08016.14, score=23.2]} {Human: ENSG00000144285, SCN1A, sodium voltage-gated channel alpha subunit 1, [Score=502, Expect=4e-157]; ENSG00000136531, SCN2A, sodium voltage-gated channel alpha subunit 2, [Score=498, Expect=2e-156]; ENSG00000169432, SCN9A, sodium voltage-gated channel alpha subunit 9, [Score=490, Expect=7e-153]; ENSG00000153253, SCN3A, sodium voltage-gated channel alpha subunit 3, [Score=486, Expect=2e-151]; ENSG00000183873, SCN5A, sodium voltage-gated channel alpha subunit 5, [Score=486, Expect=9e-152]; ENSG00000196876, SCN8A, sodium voltage-gated channel alpha subunit 8, [Score=481, Expect=1e-149]; ENSG00000007314, SCN4A, sodium voltage-gated channel alpha subunit 4, [Score=481, Expect=4e-150]} {Mouse: ENSMUSG00000064329, Scn1a, sodium channel, voltage-gated, type I, alpha, [Score=500, Expect=7e-157]; ENSMUSG00000001027, Scn4a, sodium channel, voltage-gated, type IV, alpha, [Score=494, Expect=3e-155]; ENSMUSG00000075318, Scn2a, sodium channel, voltage-gated, type II, alpha, [Score=490, Expect=4e-153]; ENSMUSG00000057182, Scn3a, sodium channel, voltage-gated, type III, alpha, [Score=484, Expect=2e-151]; ENSMUSG00000075316, Scn9a, sodium channel, voltage-gated, type IX, alpha, [Score=484, Expect=4e-151]; ENSMUSG00000032511, Scn5a, sodium channel, voltage-gated, type V, alpha, [Score=483, Expect=1e-150]; ENSMUSG00000023033, Scn8a, sodium channel, voltage-gated, type VIII, alpha, [Score=481, Expect=5e-150]; ENSMUSG00000034533, Scn10a, sodium channel, voltage-gated, type X, alpha, [Score=475, Expect=6e-148]} {Dmel: FBgn0285944, para, paralytic, [Score=538, Expect=2e-170]} {Celegans: WBGene00001187, egl-19, Voltage-dependent L-type calcium channel subunit alpha, [Score=189, Expect=6e-50]} {Smed: dd_Smed_v6_13973_0_1, dd_Smed_v6_13973_0_1, [Score=610, Expect=0.0]} {RNA1509_56147} {RNA1310_51142}

Mlig455_000489 {REF} {Length: 2384} {Pfam: Ion transport protein [PF00520.33, score=296.0]; Voltage-dependent L-type calcium channel, IQ-associated [PF16905.7, score=31.7]; Polycystin cation channel [PF08016.14, score=23.0]} {Human: ENSG00000144285, SCN1A, sodium voltage-gated channel alpha subunit 1, [Score=504, Expect=4e-157]; ENSG00000136531, SCN2A, sodium voltage-gated channel alpha subunit 2, [Score=501, Expect=2e-156]; ENSG00000169432, SCN9A, sodium voltage-gated channel alpha subunit 9, [Score=492, Expect=9e-153]; ENSG00000183873, SCN5A, sodium voltage-gated channel alpha subunit 5, [Score=489, Expect=1e-151]; ENSG00000153253, SCN3A, sodium voltage-gated channel alpha subunit 3, [Score=488, Expect=2e-151]; ENSG00000196876, SCN8A, sodium voltage-gated channel alpha subunit 8, [Score=483, Expect=9e-150]; ENSG00000007314, SCN4A, sodium voltage-gated channel alpha subunit 4, [Score=482, Expect=8e-150]; ENSG00000185313, SCN10A, sodium voltage-gated channel alpha subunit 10, [Score=479, Expect=4e-148]} {Mouse: ENSMUSG00000064329, Scn1a, sodium channel, voltage-gated, type I, alpha, [Score=502, Expect=1e-156]; ENSMUSG00000001027, Scn4a, sodium channel, voltage-gated, type IV, alpha, [Score=496, Expect=3e-155]; ENSMUSG00000075318, Scn2a, sodium channel, voltage-gated, type II, alpha, [Score=493, Expect=2e-153]; ENSMUSG00000075316, Scn9a, sodium channel, voltage-gated, type IX, alpha, [Score=487, Expect=4e-151]; ENSMUSG00000032511, Scn5a, sodium channel, voltage-gated, type V, alpha, [Score=486, Expect=1e-150]; ENSMUSG00000057182, Scn3a, sodium channel, voltage-gated, type III, alpha, [Score=486, Expect=4e-151]; ENSMUSG00000023033, Scn8a, sodium channel, voltage-gated, type VIII, alpha, [Score=483, Expect=6e-150]; ENSMUSG00000034533, Scn10a, sodium channel, voltage-gated, type X, alpha, [Score=478, Expect=7e-148]} {Dmel: FBgn0285944, para, paralytic, [Score=541, Expect=1e-170]} {Celegans: WBGene00001187, egl-19, Voltage-dependent L-type calcium channel subunit alpha, [Score=191, Expect=5e-50]} {Smed: dd_Smed_v6_14386_0_1, dd_Smed_v6_14386_0_1, [Score=627, Expect=0.0]} {RNA1509_56147} {RNA1310_51142}

Mlig455_000526 {REF} {Length: 2384} {Pfam: Ion transport protein [PF00520.33, score=296.7]; Voltage-dependent L-type calcium channel, IQ-associated [PF16905.7, score=31.7]; Polycystin cation channel [PF08016.14, score=22.9]} {Human: ENSG00000144285, SCN1A, sodium voltage-gated channel alpha subunit 1, [Score=503, Expect=3e-157]; ENSG00000136531, SCN2A, sodium voltage-gated channel alpha subunit 2, [Score=501, Expect=2e-156]; ENSG00000169432, SCN9A, sodium voltage-gated channel alpha subunit 9, [Score=492, Expect=8e-153]; ENSG00000183873, SCN5A, sodium voltage-gated channel alpha subunit 5, [Score=489, Expect=8e-152]; ENSG00000153253, SCN3A, sodium voltage-gated channel alpha subunit 3, [Score=488, Expect=2e-151]; ENSG00000196876, SCN8A, sodium voltage-gated channel alpha subunit 8, [Score=484, Expect=1e-149]; ENSG00000007314, SCN4A, sodium voltage-gated channel alpha subunit 4, [Score=483, Expect=6e-150]; ENSG00000185313, SCN10A, sodium voltage-gated channel alpha subunit 10, [Score=478, Expect=5e-148]} {Mouse: ENSMUSG00000064329, Scn1a, sodium channel, voltage-gated, type I, alpha, [Score=502, Expect=1e-156]; ENSMUSG00000001027, Scn4a, sodium channel, voltage-gated, type IV, alpha, [Score=496, Expect=3e-155]; ENSMUSG00000075318, Scn2a, sodium channel, voltage-gated, type II, alpha, [Score=493, Expect=3e-153]; ENSMUSG00000075316, Scn9a, sodium channel, voltage-gated, type IX, alpha, [Score=487, Expect=4e-151]; ENSMUSG00000057182, Scn3a, sodium channel, voltage-gated, type III, alpha, [Score=486, Expect=4e-151]; ENSMUSG00000032511, Scn5a, sodium channel, voltage-gated, type V, alpha, [Score=486, Expect=2e-150]; ENSMUSG00000023033, Scn8a, sodium channel, voltage-gated, type VIII, alpha, [Score=484, Expect=5e-150]; ENSMUSG00000034533, Scn10a, sodium channel, voltage-gated, type X, alpha, [Score=478, Expect=7e-148]} {Dmel: FBgn0285944, para, paralytic, [Score=541, Expect=1e-170]} {Celegans: WBGene00001187, egl-19, Voltage-dependent L-type calcium channel subunit alpha, [Score=191, Expect=6e-50]} {Smed: dd_Smed_v6_14386_0_1, dd_Smed_v6_14386_0_1, [Score=628, Expect=0.0]} {RNA1509_56147} {RNA1310_51142}

Mlig455_024858 {REF} {Length: 1954} {Pfam: Ion transport protein [PF00520.33, score=318.3]; Voltage-dependent L-type calcium channel, IQ-associated [PF16905.7, score=32.1]; Polycystin cation channel [PF08016.14, score=30.0]} {Human: ENSG00000144285, SCN1A, sodium voltage-gated channel alpha subunit 1, [Score=660, Expect=0.0]; ENSG00000136531, SCN2A, sodium voltage-gated channel alpha subunit 2, [Score=654, Expect=0.0]; ENSG00000169432, SCN9A, sodium voltage-gated channel alpha subunit 9, [Score=649, Expect=0.0]; ENSG00000183873, SCN5A, sodium voltage-gated channel alpha subunit 5, [Score=640, Expect=0.0]; ENSG00000153253, SCN3A, sodium voltage-gated channel alpha subunit 3, [Score=639, Expect=0.0]; ENSG00000007314, SCN4A, sodium voltage-gated channel alpha subunit 4, [Score=635, Expect=0.0]; ENSG00000196876, SCN8A, sodium voltage-gated channel alpha subunit 8, [Score=631, Expect=0.0]; ENSG00000185313, SCN10A, sodium voltage-gated channel alpha subunit 10, [Score=627, Expect=0.0]} {Mouse: ENSMUSG00000064329, Scn1a, sodium channel, voltage-gated, type I, alpha, [Score=655, Expect=0.0]; ENSMUSG00000001027, Scn4a, sodium channel, voltage-gated, type IV, alpha, [Score=652, Expect=0.0]; ENSMUSG00000075318, Scn2a, sodium channel, voltage-gated, type II, alpha, [Score=646, Expect=0.0]; ENSMUSG00000075316, Scn9a, sodium channel, voltage-gated, type IX, alpha, [Score=645, Expect=0.0]; ENSMUSG00000057182, Scn3a, sodium channel, voltage-gated, type III, alpha, [Score=637, Expect=0.0]; ENSMUSG00000032511, Scn5a, sodium channel, voltage-gated, type V, alpha, [Score=635, Expect=0.0]; ENSMUSG00000023033, Scn8a, sodium channel, voltage-gated, type VIII, alpha, [Score=630, Expect=0.0]; ENSMUSG00000034533, Scn10a, sodium channel, voltage-gated, type X, alpha, [Score=623, Expect=0.0]} {Dmel: FBgn0285944, para, paralytic, [Score=701, Expect=0.0]} {Celegans: WBGene00001187, egl-19, Voltage-dependent L-type calcium channel subunit alpha, [Score=268, Expect=3e-77]} {Smed: dd_Smed_v6_14386_0_1, dd_Smed_v6_14386_0_1, [Score=816, Expect=0.0]} {RNA1310_51142}
44. MligTC455_26653 3263 67.97 Mlig455_049144, Mlig455_049196

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.518

Region-specific R3: 7.699

Region-enriched R3: 6.693/0.00000
Region-enriched R2: 4.831/0.00028

 0.968 - 0.968 - - - -

Mlig455_049144 {REF} {Length: 862} {Pfam: CUB domain [PF00431.22, score=21.5]} {RNA1509_5316} {RNA1310_45244} {RNA815_23025}

Mlig455_049196 {REF} {Length: 3464} {Pfam: CUB domain [PF00431.22, score=21.5]} {RNA1509_23994, RNA1509_5316} {RNA1310_45244, RNA1509_23994, RNA1509_5316} {RNA1509_23994, RNA1509_5316, RNA815_23025}
45. MligTC455_27143 5346 111.38 Mlig455_010167

Neo: -

Age: Down-Down-Down

Region-enriched R3: 6.246/0.00000
Region-enriched R2: 5.974/0.00003

 0.968 - 0.968 - - - - Mlig455_010167 {REF} {Length: 734} {Pfam: Domain of unknown function (DUF4576) [PF15144.8, score=26.9]; Glycine rich protein family [PF07172.13, score=19.2]; Protein of unknown function (DUF2615) [PF11027.10, score=18.9]} {RNA1509_3211} {RNA1310_56673} {RNA815_23606.2}
46. MligTC455_27147 3478 72.45 Mlig455_010133

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-1.490

Region-enriched R3: 5.885/0.00000
Region-enriched R2: 4.733/0.00253

 0.968 - 0.968 - - - - Mlig455_010133 {REF} {Length: 571} {RNA1509_1301, RNA1509_1962, RNA1509_47216, RNA1509_6478} {RNA1310_108580, RNA1509_1301, RNA1509_1962, RNA1509_47216, RNA1509_6478} {RNA1509_1301, RNA1509_1962, RNA1509_47216, RNA1509_6478, RNA815_7257.5}
47. MligTC455_27170 6178 128.71 Mlig455_010134

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-1.205

Region-enriched R3: 6.364/0.00000
Region-enriched R2: 6.315/0.00001

 0.968 - 0.968 - - - - Mlig455_010134 {REF} {Length: 469} {RNA1509_21187, RNA1509_51739, RNA1509_5551} {RNA1310_98423, RNA1509_51739, RNA1509_5551} {RNA1509_51739, RNA1509_5551, RNA815_7257.5}
48. MligTC455_27173 6630 138.13 Mlig455_010136

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-2.151

Region-enriched R2: 5.597/0.00003
Region-enriched R3: 5.480/0.00000

 0.968 - 0.968 - - - - Mlig455_010136 {REF} {Length: 444} {RNA1509_3137, RNA1509_43912} {RNA1310_102847, RNA1509_43912} {RNA1509_43912, RNA815_23606.3}
49. MligTC455_27174 7192 149.83 Mlig455_010138

Neo: -

Age: logFC(26M/2M)=-1.319

Region-enriched R2: 6.471/0.00001
Region-enriched R3: 6.364/0.00000

 0.968 - 0.968 - - - - Mlig455_010138 {REF} {Length: 639} {RNA1509_18870, RNA1509_20242, RNA1509_3674} {RNA1310_72305, RNA1509_18870, RNA1509_20242, RNA1509_3674} {RNA1509_18870, RNA1509_20242, RNA1509_3674, RNA815_7257.4}
50. MligTC455_27187 3569 74.36 Mlig455_010139, Mlig455_010238

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-2.816

Region-enriched R3: 7.270/0.00000
Region-enriched R2: 5.462/0.00180

 0.968 - 0.968 - - - -

Mlig455_010139 {REF} {Length: 1000} {RNA1509_37487} {RNA1310_97543.1} {RNA815_20558}

Mlig455_010238 {REF} {Length: 763} {RNA1509_37487} {RNA1310_97543.1} {RNA815_20558}
51. MligTC455_33907 20 0.42 Mlig455_008159, Mlig455_069580

Neo: -

Age: -

 0.968 - - - - - 0.968

Mlig455_008159 {REF} {Length: 168} {NoTransDecoderORF} {RNA815_40467}

Mlig455_069580 {REF} {Length: 1478} {RNA815_40467}
52. MligTC455_38670 7 0.15 Mlig455_006879

Neo: -

Age: -

 0.968 - - - - - 0.968 Mlig455_006879 {REF} {Length: 795} {RNA1509_50839} {RNA1310_131129} {RNA815_18706.1}
53. MligTC455_40068 15 0.32 Mlig455_046778, Mlig455_046807

Neo: -

Age: Up-Down-Down

 CHRM1 0.968 - 0.968 - - - -

Mlig455_046778 {REF} {Length: 3211} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=234.7]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=71.2]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=33.5]; Serpentine type 7TM GPCR chemoreceptor Srv [PF10323.11, score=23.9]} {Human: ENSG00000168539, CHRM1, cholinergic receptor muscarinic 1, [Score=153, Expect=2e-39]; ENSG00000180720, CHRM4, cholinergic receptor muscarinic 4, [Score=151, Expect=2e-38]; ENSG00000184984, CHRM5, cholinergic receptor muscarinic 5, [Score=150, Expect=6e-38]; ENSG00000133019, CHRM3, cholinergic receptor muscarinic 3, [Score=147, Expect=1e-36]; ENSG00000181072, CHRM2, cholinergic receptor muscarinic 2, [Score=147, Expect=3e-37]} {Mouse: ENSMUSG00000032773, Chrm1, cholinergic receptor, muscarinic 1, CNS, [Score=152, Expect=4e-39]; ENSMUSG00000040495, Chrm4, cholinergic receptor, muscarinic 4, [Score=152, Expect=6e-39]; ENSMUSG00000045613, Chrm2, cholinergic receptor, muscarinic 2, cardiac, [Score=149, Expect=5e-38]; ENSMUSG00000074939, Chrm5, cholinergic receptor, muscarinic 5, [Score=149, Expect=2e-37]; ENSMUSG00000046159, Chrm3, cholinergic receptor, muscarinic 3, cardiac, [Score=148, Expect=6e-37]} {Dmel: FBgn0037546, mAChR-B, muscarinic Acetylcholine Receptor, B-type, [RH, Score=233, Expect=4e-64]} {Celegans: WBGene00001518, gar-2, Probable muscarinic acetylcholine receptor gar-2, [RH, Score=189, Expect=1e-54]} {Smed: dd_Smed_v6_13962_0_1, dd_Smed_v6_13962_0_1, [RH, Score=317, Expect=4e-97]} {RNA1310_44335} {RNA815_48112}

Mlig455_046807 {REF} {Length: 3408} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=235.1]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=70.9]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=33.1]; Serpentine type 7TM GPCR chemoreceptor Srv [PF10323.11, score=23.8]} {Human: ENSG00000168539, CHRM1, cholinergic receptor muscarinic 1, [Score=152, Expect=5e-39]; ENSG00000180720, CHRM4, cholinergic receptor muscarinic 4, [Score=151, Expect=1e-38]; ENSG00000184984, CHRM5, cholinergic receptor muscarinic 5, [Score=151, Expect=5e-38]; ENSG00000133019, CHRM3, cholinergic receptor muscarinic 3, [Score=148, Expect=1e-36]; ENSG00000181072, CHRM2, cholinergic receptor muscarinic 2, [Score=147, Expect=3e-37]} {Mouse: ENSMUSG00000032773, Chrm1, cholinergic receptor, muscarinic 1, CNS, [Score=154, Expect=1e-39]; ENSMUSG00000040495, Chrm4, cholinergic receptor, muscarinic 4, [Score=152, Expect=6e-39]; ENSMUSG00000045613, Chrm2, cholinergic receptor, muscarinic 2, cardiac, [Score=149, Expect=5e-38]; ENSMUSG00000074939, Chrm5, cholinergic receptor, muscarinic 5, [Score=149, Expect=2e-37]; ENSMUSG00000046159, Chrm3, cholinergic receptor, muscarinic 3, cardiac, [Score=148, Expect=6e-37]} {Dmel: FBgn0037546, mAChR-B, muscarinic Acetylcholine Receptor, B-type, [RH, Score=232, Expect=2e-63]} {Celegans: WBGene00001518, gar-2, Probable muscarinic acetylcholine receptor gar-2, [RH, Score=189, Expect=2e-54]} {Smed: dd_Smed_v6_13962_0_1, dd_Smed_v6_13962_0_1, [RH, Score=316, Expect=4e-96]} {RNA1310_44335} {RNA815_48112}
54. MligTC455_41049 9 0.18 Mlig455_037417

Neo: -

Age: -

 CHRNA7 0.968 - - - - - 0.968 Mlig455_037417 {REF} {Length: 2364} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=78.3]; Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=68.2]} {Human: ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=89.0, Expect=6e-18]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=88.6, Expect=9e-18]; ENSG00000166664, CHRFAM7A, CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, [Score=88.2, Expect=2e-18]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=88.2, Expect=9e-18]; ENSG00000275917, CHRFAM7A, CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, [Score=87.8, Expect=3e-18]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=87.4, Expect=1e-17]; ENSMUSG00000027950, Chrnb2, cholinergic receptor, nicotinic, beta polypeptide 2 (neuronal), [Score=83.6, Expect=4e-16]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=91.7, Expect=5e-19]} {Celegans: WBGene00001133, eat-2, Neuronal acetylcholine receptor subunit eat-2, [Score=87.4, Expect=6e-18]} {Smed: dd_Smed_v6_8058_0_1, dd_Smed_v6_8058_0_1, [Score=100, Expect=4e-22]} {RNA1310_62298} {RNA815_39342}
55. MligTC455_52469 900 18.74 Mlig455_021754

Neo: Irradiation

Age: -

Region-enriched R8: 7.394/0.00000
Region-enriched R7: 3.293/0.04183

 TACR3 0.968 - - - - 0.968 - Mlig455_021754 {REF} {Length: 2340} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=73.6]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=20.7]} {Human: ENSG00000169836, TACR3, tachykinin receptor 3, [Score=65.1, Expect=8e-11]; ENSG00000075073, TACR2, tachykinin receptor 2, [Score=63.2, Expect=3e-10]} {Mouse: ENSMUSG00000028172, Tacr3, tachykinin receptor 3, [Score=64.3, Expect=9e-11]; ENSMUSG00000020081, Tacr2, tachykinin receptor 2, [Score=63.9, Expect=1e-10]} {Dmel: FBgn0085410, TrissinR, Trissin receptor, [Score=66.2, Expect=2e-11]} {Celegans: WBGene00022004, npr-22, NeuroPeptide Receptor family, [Score=70.1, Expect=8e-13]} {Smed: dd_Smed_v6_45004_0_1, dd_Smed_v6_45004_0_1, [Score=58.2, Expect=3e-09]} {RNA1509_15830} {RNA1310_8194} {RNA815_11760.1}
56. MligTC455_22399 3614 75.29 Mlig455_049143

Neo: -

Age: Down-Down-Up

Region-enriched R3: 6.448/0.00000
Region-enriched R2: 3.999/0.01851

 0.967 - 0.967 - - - - Mlig455_049143 {REF} {Length: 1035} {RNA1509_3861, RNA1509_6763} {RNA1310_46088, RNA1509_3861} {RNA1509_3861, RNA815_22985}
57. MligTC455_27142 5464 113.84 Mlig455_010132

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-1.296

Region-enriched R3: 6.613/0.00000
Region-enriched R2: 6.470/0.00001

 0.967 - 0.967 - - - - Mlig455_010132 {REF} {Length: 587} {RNA1509_3211} {RNA1310_56673, RNA1509_3211} {RNA1509_3211, RNA815_23606.2}
58. MligTC455_26980 15519 323.32 Mlig455_010145, Mlig455_010242

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-1.728

Region-enriched R3: 5.655/0.00000
Region-enriched R2: 5.421/0.00011

 0.966 - 0.966 - - - -

Mlig455_010145 {REF} {Length: 1133} {RNA1509_21264} {RNA1310_3921} {RNA815_47474}

Mlig455_010242 {REF} {Length: 436} {RNA1509_25410, RNA1509_2711, RNA1509_41704} {RNA1310_56005, RNA1509_25410, RNA1509_2711, RNA1509_41704} {RNA1509_25410, RNA1509_2711, RNA1509_41704, RNA815_23023.2}
59. MligTC455_11332 54 1.12 Mlig455_030269

Neo: Irradiation

Age: logFC(26M/2M)=0.396

Region-enriched R2: 7.723/0.02062
Region-enriched R5: 4.672/0.01786

 0.965 - - - - 0.965 - Mlig455_030269 {REF} {Length: 4073} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=22.9]} {RNA1509_30357} {RNA1310_40025} {RNA815_26955}
60. MligTC455_22174 107 2.24 Mlig455_035328

Neo: -

Age: logFC(26M/2M)=-0.830

 0.965 - - - 0.965 - - Mlig455_035328 {REF} {Length: 1563} {Pfam: Methyltransferase FkbM domain [PF05050.14, score=18.7]} {Smed: dd_Smed_v6_12148_0_2, dd_Smed_v6_12148_0_2, [Score=66.2, Expect=9e-13]} {RNA1310_20880} {RNA815_24398}
61. MligTC455_27148 6221 129.59 Mlig455_010235

Neo: -

Age: logFC(26M/2M)=-2.081

Region-enriched R3: 7.088/0.00000
Region-enriched R2: 7.010/0.00001

 0.965 - 0.965 - - - - Mlig455_010235 {REF} {Length: 111} {NoTransDecoderORF} {RNA1509_1301, RNA1509_33935} {RNA1310_108580, RNA1509_33935} {RNA1509_33935, RNA815_7257.1}
62. MligTC455_48324 1746 36.38 Mlig455_058196

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.604

Region-enriched R3: 5.386/0.00000

 ZAN 0.965 - 0.965 - - - - Mlig455_058196 {REF} {Length: 2399} {Human: ENSG00000146839, ZAN, zonadhesin (gene/pseudogene), [Score=150, Expect=3e-37]} {Mouse: ENSMUSG00000049008, BB014433, expressed sequence BB014433, [Score=67.0, Expect=2e-11]; ENSMUSG00000079173, Zan, zonadhesin, [Score=63.9, Expect=5e-10]} {Dmel: FBgn0034294, Muc55B, Mucin 55B, [Score=109, Expect=6e-25]} {RNA1509_27445} {RNA1310_7841} {RNA815_14882.1}
63. MligTC455_13469 72 1.49 Mlig455_053617

Neo: Irradiation

Age: Up-Down-Down

 0.964 - - - - 0.964 - Mlig455_053617 {REF} {Length: 2463} {tRNA: Thr(CGT),pseudo, score=28.2} {Pfam: F-box domain [PF00646.35, score=33.5]; F-box-like [PF12937.9, score=26.8]} {RNA1509_46688} {RNA1310_36647.1} {RNA815_23340}
64. MligTC455_27175 1238 25.79 Mlig455_010169

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.628

Region-enriched R3: 6.302/0.00000
Region-enriched R2: 5.158/0.00877

 0.964 - 0.964 - - - - Mlig455_010169 {REF} {Length: 446} {RNA1509_20242} {RNA1310_91812.1} {RNA815_23606.3}
65. MligTC455_36286 2583 53.81 Mlig455_049146

Neo: -

Age: Down-Down-Up

Region-enriched R3: 6.207/0.00000
Region-enriched R2: 4.650/0.00131

 0.963 - 0.963 - - - - Mlig455_049146 {REF} {Length: 746} {Pfam: CUB domain [PF00431.22, score=28.0]} {RNA1509_1672} {RNA1310_53620, RNA1509_1672} {RNA1509_1672, RNA815_26829}
66. MligTC455_05615 16 0.33 Mlig455_033660

Neo: -

Age: Down-Down-Up

 EPHX1 0.962 - - - - - 0.962 Mlig455_033660 {REF} {Length: 3319} {Pfam: Epoxide hydrolase N terminus [PF06441.14, score=106.2]; alpha/beta hydrolase fold [PF00561.22, score=52.7]} {Human: ENSG00000143819, EPHX1, epoxide hydrolase 1, [Score=239, Expect=9e-75]} {Mouse: ENSMUSG00000038776, Ephx1, epoxide hydrolase 1, microsomal, [Score=237, Expect=4e-74]} {Dmel: FBgn0034406, Jheh3, Juvenile hormone epoxide hydrolase 3, [Score=229, Expect=2e-71]} {Celegans: WBGene00020909, W01A11.1, Epoxide hydrolase, [Score=233, Expect=1e-72]} {Smed: dd_Smed_v6_5113_0_1, dd_Smed_v6_5113_0_1, [Score=230, Expect=6e-72]} {RNA1509_43798} {RNA1310_15477} {RNA815_6806.1}
67. MligTC455_27186 28 0.57 Mlig455_010236

Neo: -

Age: logFC(26M/2M)=-1.855

 0.962 - 0.962 - - - - Mlig455_010236 {REF} {Length: 486} {RNA1509_7146} {RNA1310_76234.2} {RNA815_34947.2}
68. MligTC455_01757 9 0.19 Mlig455_051452

Neo: -

Age: -

 0.961 - - - - - 0.961 Mlig455_051452 {REF} {Length: 298} {NoTransDecoderORF} {RNA1310_58092} {RNA815_50705}
69. MligTC455_11648 38 0.8 Mlig455_031073

Neo: Irradiation

Age: -

Region-enriched R5: 3.267/0.03926

 0.961 - - - - - 0.961 Mlig455_031073 {REF} {Length: 1035} {Mouse: ENSMUSG00000070425, Xntrpc, Xndc1-transient receptor potential cation channel, subfamily C, member 2 readthrough, [Score=76.6, Expect=3e-15]; ENSMUSG00000100254, Trpc2, transient receptor potential cation channel, subfamily C, member 2, [Score=74.3, Expect=2e-14]} {RNA1310_35920} {RNA815_60543}
70. MligTC455_03028 1 0.02 Mlig455_006543, Mlig455_017427, Mlig455_030891

Neo: -

Age: Down-Up-Down

 SETMAR 0.96 - - - - - 0.960

Mlig455_006543 {REF} {Length: 516} {Pfam: DDE superfamily endonuclease [PF13358.8, score=28.0]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=67.8, Expect=1e-13]} {Smed: dd_Smed_v6_52102_0_1, dd_Smed_v6_52102_0_1, [Score=67.0, Expect=2e-15]} {RNA1509_29296} {RNA1310_9888.1} {RNA815_18385}

Mlig455_017427 {REF} {Length: 577} {Pfam: Transposase (partial DDE domain) [PF01359.20, score=46.7]} {RNA1509_29296} {RNA1310_20473.2} {RNA815_18385}

Mlig455_030891 {REF} {Length: 622} {Pfam: Transposase (partial DDE domain) [PF01359.20, score=46.9]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=54.3, Expect=7e-09]} {RNA1509_29296} {RNA1310_20473.2} {RNA815_18385}
71. MligTC455_40203 207 4.32 Mlig455_005100, Mlig455_005208

Neo: -

Age: -

 0.959 - - - - - 0.959

Mlig455_005100 {REF} {Length: 2108} {RNA1509_4618} {RNA1310_30950} {RNA815_29369}

Mlig455_005208 {REF} {Length: 2172} {RNA1310_30060} {RNA815_29369}
72. MligTC455_31787 8 0.17 Mlig455_052630

Neo: -

Age: -

 TRIM3 0.958 - - - - 0.958 - Mlig455_052630 {REF} {Length: 2227} {Pfam: NHL repeat [PF01436.23, score=30.0]} {Human: ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=59.3, Expect=6e-09]} {Mouse: ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=59.3, Expect=4e-09]} {RNA1509_15622} {RNA1310_14145.1} {RNA815_3900.1}
73. MligTC455_38463 19 0.39 Mlig455_057313

Neo: -

Age: -

 0.958 - - - - 0.958 - Mlig455_057313 {REF} {Length: 937} {NoTransDecoderORF} {RNA1509_25022} {RNA1310_113003} {RNA815_23623}
74. MligTC455_04381 14 0.28 Mlig455_048984, Mlig455_049000

Neo: -

Age: -

 0.957 - - - - 0.957 -

Mlig455_048984 {REF} {Length: 259} {NoTransDecoderORF} {RNA1509_46403} {RNA1310_8957} {RNA815_3385.1}

Mlig455_049000 {REF} {Length: 161} {NoTransDecoderORF} {RNA1509_46403} {RNA1310_8957} {RNA815_1210.1}
75. MligTC455_18819 6 0.13 Mlig455_027535

Neo: -

Age: -

 0.957 - - - - 0.957 - Mlig455_027535 {REF} {Length: 226} {NoTransDecoderORF} {RNA1509_37388} {RNA1310_340.1} {RNA815_14498.2}
76. MligTC455_27145 8401 175.01 Mlig455_010143

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-2.284

Region-enriched R2: 5.717/0.00021
Region-enriched R3: 5.326/0.00000

 0.957 - 0.957 - - - - Mlig455_010143 {REF} {Length: 787} {RNA1509_20914, RNA1509_35431} {RNA1310_45578.1, RNA1509_35431} {RNA1509_35431, RNA815_23023.1}
77. MligTC455_26979 7955 165.73 Mlig455_010144

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-2.259

Region-enriched R2: 5.244/0.00009
Region-enriched R3: 5.229/0.00000

 0.956 - 0.956 - - - - Mlig455_010144 {REF} {Length: 856} {RNA1509_22365, RNA1509_23116, RNA1509_7551} {RNA1310_62616, RNA1509_22365, RNA1509_7551} {RNA1509_22365, RNA1509_7551, RNA815_23023.3}
78. MligTC455_01053 33 0.69 Mlig455_008206

Neo: -

Age: -

 0.955 - - - - 0.955 - Mlig455_008206 {REF} {Length: 1189} {Pfam: F5/8 type C domain [PF00754.27, score=27.4]} {Smed: dd_Smed_v6_46759_0_1, dd_Smed_v6_46759_0_1, [Score=44.7, Expect=7e-06]} {RNA1310_28170} {RNA815_37289}
79. MligTC455_27153 7470 155.63 Mlig455_010233

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.758

Region-enriched R3: 5.499/0.00000
Region-enriched R2: 5.080/0.00005

 0.955 - 0.955 - - - - Mlig455_010233 {REF} {Length: 2801} {RNA1509_20914, RNA1509_21187, RNA1509_3137, RNA1509_37402, RNA1509_37487, RNA1509_40054, RNA1509_445, RNA1509_50593} {RNA1310_45578.1, RNA1509_20914, RNA1509_21187, RNA1509_3137, RNA1509_37402, RNA1509_37487, RNA1509_40054, RNA1509_445, RNA1509_50593} {RNA1509_20914, RNA1509_21187, RNA1509_3137, RNA1509_37402, RNA1509_37487, RNA1509_40054, RNA1509_445, RNA1509_50593, RNA815_7257.5}
80. MligTC455_05798 6 0.12 Mlig455_064077

Neo: -

Age: -

 0.952 - - - - 0.952 - Mlig455_064077 {REF} {Length: 286} {NoTransDecoderORF} {RNA1509_15229} {RNA1310_12845.1}
81. MligTC455_09784 208 4.33 Mlig455_040642

Neo: -

Age: -

 0.952 - - - - 0.952 - Mlig455_040642 {REF} {Length: 758} {NoTransDecoderORF}
82. MligTC455_12796 7 0.14 Mlig455_022864

Neo: -

Age: -

 0.952 - - - - 0.952 - Mlig455_022864 {REF} {Length: 432} {NoTransDecoderORF} {RNA1310_62625}
83. MligTC455_00805 9 0.18 Mlig455_050616

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_050616 {REF} {Length: 340} {NoTransDecoderORF} {RNA1310_103921} {RNA815_53976}
84. MligTC455_07399 13 0.27 Mlig455_042484

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_042484 {REF} {Length: 3577} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=95.6]} {Smed: dd_Smed_v6_17245_0_1, dd_Smed_v6_17245_0_1, [Score=62.0, Expect=8e-10]} {RNA1310_65251} {RNA815_37174}
85. MligTC455_16344 8 0.17 Mlig455_049962

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_049962 {REF} {Length: 3400} {TRANSSPLICED} {Pfam: Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=143.4]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=27.8]} {RNA1509_31227} {RNA1310_23862.1} {RNA815_8951}
86. MligTC455_20832 9 0.18 Mlig455_064272

Neo: -

Age: Up-Down-Down

 NYNRIN 0.951 - - - - 0.951 - Mlig455_064272 {REF} {Length: 3385} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=76.0]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=72.0]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=46.6]; Integrase core domain [PF00665.28, score=29.4]; Zinc knuckle [PF00098.25, score=25.0]; Retroviral aspartyl protease [PF00077.22, score=19.9]; Aspartyl protease [PF13650.8, score=19.4]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=62.4, Expect=5e-09]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=214, Expect=5e-57]} {RNA1509_52470} {RNA1310_7413} {RNA815_28741}
87. MligTC455_32283 8 0.16 Mlig455_036099

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_036099 {REF} {Length: 575} {Pfam: Transcription factor IIA, alpha/beta subunit [PF03153.15, score=20.3]} {RNA1310_12760} {RNA815_50138}
88. MligTC455_09661 16 0.32 Mlig455_069854

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_069854 {REF} {Length: 2803} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=54.1]; Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=36.5]; Endonuclease-reverse transcriptase [PF14529.8, score=31.2]; PHD-finger [PF00628.31, score=19.8]} {RNA1310_54800}
89. MligTC455_27673 123 2.56 Mlig455_041241, Mlig455_053095

Neo: -

Age: Up-Down-Up

 GLRA1, GLRA3 0.95 - - - 0.950 - -

Mlig455_041241 {REF} {Length: 4857} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=165.7]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=84.7]} {Human: ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=253, Expect=3e-78]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=249, Expect=9e-77]; ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=246, Expect=1e-75]} {Mouse: ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=246, Expect=7e-76]; ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=244, Expect=2e-74]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [Score=243, Expect=1e-74]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=240, Expect=2e-73]} {Dmel: FBgn0024963, GluClalpha, [Score=256, Expect=1e-79]} {Celegans: WBGene00000233, avr-15, GluClalpha2B protein, [RH, Score=247, Expect=6e-76]} {Smed: dd_Smed_v6_11342_0_1, dd_Smed_v6_11342_0_1, [RH, Score=440, Expect=1e-151]} {RNA1509_35986} {RNA1310_28655} {RNA815_20247}

Mlig455_053095 {REF} {Length: 4892} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=163.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=83.4]} {Human: ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=254, Expect=9e-79]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=251, Expect=1e-77]; ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=243, Expect=9e-75]} {Mouse: ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [Score=248, Expect=9e-77]; ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=244, Expect=5e-75]; ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=242, Expect=4e-74]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=236, Expect=2e-72]} {Dmel: FBgn0024963, GluClalpha, [Score=257, Expect=4e-80]} {Celegans: WBGene00000233, avr-15, GluClalpha2B protein, [Score=252, Expect=3e-78]} {Smed: dd_Smed_v6_11342_0_1, dd_Smed_v6_11342_0_1, [Score=449, Expect=1e-155]} {RNA1509_54479} {RNA1310_56579} {RNA815_20247}
90. MligTC455_28839 4 0.08 Mlig455_005360

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_005360 {REF} {Length: 3937} {RNA1509_44518} {RNA1310_34830.1} {RNA815_18494}
91. MligTC455_38222 10 0.21 Mlig455_020659

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_020659 {REF} {Length: 1868} {NoTransDecoderORF} {RNA1509_57328} {RNA1310_4461} {RNA815_2341}
92. MligTC455_52902 41 0.84 Mlig455_053281

Neo: -

Age: -

 TRPC6 0.95 - - - 0.950 - - Mlig455_053281 {REF} {Length: 3581} {Pfam: Ion transport protein [PF00520.33, score=32.2]} {Human: ENSG00000137672, TRPC6, transient receptor potential cation channel subfamily C member 6, [Score=124, Expect=2e-28]} {Mouse: ENSMUSG00000031997, Trpc6, transient receptor potential cation channel, subfamily C, member 6, [Score=115, Expect=4e-26]; ENSMUSG00000021541, Trpc7, transient receptor potential cation channel, subfamily C, member 7, [Score=112, Expect=4e-25]} {Dmel: FBgn0032593, Trpgamma, Transient receptor potential cation channel gamma, [Score=111, Expect=9e-25]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=66.6, Expect=5e-11]} {Smed: dd_Smed_v6_13048_0_2, dd_Smed_v6_13048_0_2, [Score=85.9, Expect=4e-17]} {RNA1509_36039} {RNA1310_4382} {RNA815_15390}
93. MligTC455_55712 4 0.07 Mlig455_031873

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_031873 {REF} {Length: 1538} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=54.9]; Zinc knuckle [PF00098.25, score=24.8]; Aspartyl protease [PF13650.8, score=21.0]; gag-polyprotein putative aspartyl protease [PF13975.8, score=20.7]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=99.0, Expect=1e-21]} {RNA1509_44038} {RNA1310_11212} {RNA815_52853}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA