Data search
Results for MligTC455_29020
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_29020 | 46 | 0.96 | Mlig455_009444 | Neo: - Age: logFC(26M/2M)=2.254 Regeneration-upregulated R4: 6.560 Regeneration-enriched R4: 6.560 |
Mlig455_009444 {REF} {Length: 3939} {Smed: dd_Smed_v6_129_2_2, dd_Smed_v6_129_2_2, [Score=105, Expect=5e-23]} {RNA1509_32396} {RNA1310_3059.1} {RNA815_7477.1} |
Cumulative graph for MligTC455_29020
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -3.377 | 1.158 | 0.99994 | 1.00000 | |
| RegionR2 | 3.029 | 1.158 | 0.99991 | 1.00000 | |
| RegionR3 | 0.697 | 1.158 | 0.99998 | 1.00000 | |
| RegionR4 | -2.538 | 1.158 | 0.99983 | 1.00000 | |
| RegionR5 | -0.275 | 1.158 | 0.99992 | 1.00000 | |
| RegionR6 | 0.692 | 1.158 | 0.99998 | 1.00000 | |
| RegionR7 | 0.952 | 1.158 | 0.99995 | 1.00000 | |
| RegionR8 | 0.821 | 1.158 | 0.99995 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 7.492 | 1.158 | 0.23558 | 0.96550 | |
| RegenerationR2 | 4.184 | 1.158 | 0.00215 | 0.07011 | |
| RegenerationR3 | 4.961 | 1.158 | 0.00705 | 0.15333 | |
| RegenerationR4 | 6.56 | 1.158 | 0.00004 | 0.00375 | Specific for R4: 6.560 |
| RegenerationR5 | 5.019 | 1.158 | 0.00052 | 0.03799 | |
| RegenerationR6 | 5.199 | 1.158 | 0.00452 | 0.08094 | |
| RegenerationBL | 0.888 | 1.158 | 0.73025 | 1.00000 | |
| RegenerationTP | 6.206 | 1.158 | 0.00522 | 0.12120 |
Genes with expression patterns similar to MligTC455_29020
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_29020 | 46 | 0.96 | Mlig455_009444 | Neo: - Age: logFC(26M/2M)=2.254 Regeneration-upregulated R4: 6.560 Regeneration-enriched R4: 6.560 |
3 | - | - | - | 1.000 | 1.000 | 1.000 | Mlig455_009444 {REF} {Length: 3939} {Smed: dd_Smed_v6_129_2_2, dd_Smed_v6_129_2_2, [Score=105, Expect=5e-23]} {RNA1509_32396} {RNA1310_3059.1} {RNA815_7477.1} | |
| 2. | MligTC455_27961 | 161 | 3.36 | Mlig455_033788 | Neo: Irradiation Age: Up-Down-Down Region-enriched R4: 2.381/0.02589 |
MYO18A | 0.989 | - | - | - | 0.989 | - | - | Mlig455_033788 {REF} {Length: 7335} {TRANSSPLICED} {Pfam: Myosin head (motor domain) [PF00063.23, score=304.4]; PDZ domain [PF17820.3, score=26.5]; PDZ domain [PF00595.26, score=25.5]; Myosin tail [PF01576.21, score=21.1]} {Human: ENSG00000196535, MYO18A, myosin XVIIIA, [RH, Score=872, Expect=0.0]} {Mouse: ENSMUSG00000000631, Myo18a, myosin XVIIIA, [RH, Score=866, Expect=0.0]} {Dmel: FBgn0026059, Mhcl, Myosin heavy chain-like, [RH, Score=877, Expect=0.0]} {Celegans: WBGene00003776, nmy-1, Non-muscle MYosin, [Score=362, Expect=3e-101]} {Smed: dd_Smed_v6_6277_0_1, dd_Smed_v6_6277_0_1, [RH, Score=798, Expect=0.0]} {RNA1509_9265} {RNA1310_390, RNA1509_9265} {RNA1509_9265, RNA815_386} |
| 3. | MligTC455_20590 | 333 | 6.95 | Mlig455_011663, Mlig455_049924 | Neo: Irradiation Age: Up-Down-Down, logFC(26M/2M)=-0.447 Region-specific R4: 6.602 Region-enriched R4: 3.679/0.00006 |
0.978 | - | - | - | 0.978 | - | - | Mlig455_011663 {REF} {Length: 3326} {Pfam: Transcription factor IIA, alpha/beta subunit [PF03153.15, score=19.7]} {RNA1509_16168} {RNA1310_7446.1} {RNA815_20506} Mlig455_049924 {REF} {Length: 3338} {RNA1509_16168, RNA1509_28346} {RNA1310_7446.1, RNA1509_16168, RNA1509_28346} {RNA1509_16168, RNA1509_28346, RNA815_20506} |
|
| 4. | MligTC455_19121 | 962 | 20.04 | Mlig455_033268 | Neo: - Age: Down-Up-Down Region-enriched R4: 1.638/0.00011 |
GOLGA7 | 0.957 | - | - | - | - | 0.957 | - | Mlig455_033268 {REF} {Length: 1061} {TRANSSPLICED} {Pfam: Golgin subfamily A member 7/ERF4 family [PF10256.11, score=93.5]} {Human: ENSG00000147533, GOLGA7, golgin A7, [RH, Score=120, Expect=8e-35]} {Mouse: ENSMUSG00000015341, Golga7, golgi autoantigen, golgin subfamily a, 7, [RH, Score=119, Expect=6e-35]} {Dmel: FBgn0039427, CG5447, [Score=121, Expect=2e-35]} {Celegans: WBGene00013323, Y57G11C.33, [Score=83.6, Expect=1e-20]} {Smed: dd_Smed_v6_5627_0_2, dd_Smed_v6_5627_0_2, [Score=103, Expect=6e-29]} {RNA1509_10331} {RNA1310_30594, RNA1509_10331} {RNA1509_10331, RNA815_15047} |
| 5. | MligTC455_12725 | 406 | 8.45 | Mlig455_020632, Mlig455_048832 | Neo: Germline Age: - Region-specific R4: 4.548 Region-enriched R4: 3.730/0.00000 |
0.952 | - | - | - | 0.952 | - | - | Mlig455_020632 {REF} {Length: 1639} {RNA1509_58758} {RNA1310_4057.1} {RNA815_29188} Mlig455_048832 {REF} {Length: 1707} {RNA1509_38156, RNA1509_58758} {RNA1310_9406, RNA1509_38156} {RNA1509_38156, RNA815_29188} |
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