TomoSeq data search

Data search

Results for MligTC455_29042

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_29042	208	4.32	Mlig455_041838	Neo: - Age: -		Mlig455_041838 {REF} {Length: 1271} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_24995} {RNA1310_50216} {RNA815_30799}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_29042

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-7.143	2.769	0.06542	0.57759
RegionR2	2.2	2.769	0.02541	0.17848
RegionR3	1.8	2.769	0.02594	0.27510
RegionR4	-0.344	2.769	0.93635	1.00000
RegionR5	1.49	2.769	0.05201	0.19306
RegionR6	0.992	2.769	0.30393	0.89506
RegionR7	0.43	2.769	0.68946	1.00000
RegionR8	0.575	2.769	0.64471	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	1.669	2.769	0.99982	1.00000
RegenerationR2	0.949	2.769	0.09226	0.48467
RegenerationR3	0.863	2.769	0.18712	0.62271
RegenerationR4	1.962	2.769	0.00454	0.09376
RegenerationR5	0.86	2.769	0.13987	0.55240
RegenerationR6	1.601	2.769	0.02029	0.17590
RegenerationBL	1.398	2.769	0.10613	0.38454
RegenerationTP	0.828	2.769	0.42865	0.85178

Genes with expression patterns similar to MligTC455_29042

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_29042	208	4.32	Mlig455_041838	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_041838 {REF} {Length: 1271} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_24995} {RNA1310_50216} {RNA815_30799}
2.	MligTC455_34285	182	3.79	Mlig455_029837	Neo: - Age: - Region-enriched R4: 3.268/0.00673		0.97	-	-	-	0.970	-	-	Mlig455_029837 {REF} {Length: 2097} {TRANSSPLICED} {Pfam: PKC-activated protein phosphatase-1 inhibitor [PF05361.14, score=45.3]} {Dmel: FBgn0032297, CG17124, [RH, Score=85.1, Expect=2e-22]} {Smed: dd_Smed_v6_6245_0_1, dd_Smed_v6_6245_0_1, [RH, Score=81.3, Expect=3e-21]} {RNA1509_28546, RNA1509_37788} {RNA1310_20897, RNA1509_28546, RNA1509_37788} {RNA1509_28546, RNA1509_37788, RNA815_19369.2}
3.	MligTC455_39242	206	4.3	Mlig455_042010	Neo: Int S/G2/M Age: -	NEK2	0.968	-	-	0.968	-	-	-	Mlig455_042010 {REF} {Length: 2678} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=210.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=142.1]; Kinase-like [PF14531.8, score=25.9]; ABC1 atypical kinase-like domain [PF03109.18, score=24.7]} {Human: ENSG00000117650, NEK2, NIMA related kinase 2, [RH, Score=335, Expect=4e-110]} {Mouse: ENSMUSG00000110797, Nek2, NIMA (never in mitosis gene a)-related expressed kinase 2, [RH, Score=324, Expect=3e-106]; ENSMUSG00000026622, Nek2, NIMA (never in mitosis gene a)-related expressed kinase 2, [RH, Score=324, Expect=3e-106]} {Dmel: FBgn0029970, Nek2, [RH, Score=263, Expect=2e-79]} {Celegans: WBGene00008956, nekl-3, Serine/threonine-protein kinase nekl-3, [Score=179, Expect=3e-52]} {Smed: dd_Smed_v6_8347_0_2, dd_Smed_v6_8347_0_2, [Score=187, Expect=2e-55]} {RNA1509_56527} {RNA1310_29373, RNA1509_56527} {RNA1509_56527, RNA815_3391.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_29042

208

4.32

Mlig455_041838

Neo: -

Age: -

1.000

Mlig455_041838 {REF} {Length: 1271} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_24995} {RNA1310_50216} {RNA815_30799}

MligTC455_34285

182

3.79

Mlig455_029837

Neo: -

Age: -

Region-enriched R4: 3.268/0.00673

0.97

0.970

Mlig455_029837 {REF} {Length: 2097} {TRANSSPLICED} {Pfam: PKC-activated protein phosphatase-1 inhibitor [PF05361.14, score=45.3]} {Dmel: FBgn0032297, CG17124, [RH, Score=85.1, Expect=2e-22]} {Smed: dd_Smed_v6_6245_0_1, dd_Smed_v6_6245_0_1, [RH, Score=81.3, Expect=3e-21]} {RNA1509_28546, RNA1509_37788} {RNA1310_20897, RNA1509_28546, RNA1509_37788} {RNA1509_28546, RNA1509_37788, RNA815_19369.2}

MligTC455_39242

206

4.3

Mlig455_042010

Neo: Int S/G2/M

Age: -

NEK2

0.968

Mlig455_042010 {REF} {Length: 2678} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=210.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=142.1]; Kinase-like [PF14531.8, score=25.9]; ABC1 atypical kinase-like domain [PF03109.18, score=24.7]} {Human: ENSG00000117650, NEK2, NIMA related kinase 2, [RH, Score=335, Expect=4e-110]} {Mouse: ENSMUSG00000110797, Nek2, NIMA (never in mitosis gene a)-related expressed kinase 2, [RH, Score=324, Expect=3e-106]; ENSMUSG00000026622, Nek2, NIMA (never in mitosis gene a)-related expressed kinase 2, [RH, Score=324, Expect=3e-106]} {Dmel: FBgn0029970, Nek2, [RH, Score=263, Expect=2e-79]} {Celegans: WBGene00008956, nekl-3, Serine/threonine-protein kinase nekl-3, [Score=179, Expect=3e-52]} {Smed: dd_Smed_v6_8347_0_2, dd_Smed_v6_8347_0_2, [Score=187, Expect=2e-55]} {RNA1509_56527} {RNA1310_29373, RNA1509_56527} {RNA1509_56527, RNA815_3391.1}