Data search
Results for MligTC455_29091
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_29091 | 132 | 2.74 | Mlig455_007019 | Neo: - Age: Down-Up-Down |
Mlig455_007019 {REF} {Length: 4080} {TRANSSPLICED} {RNA1509_13072} {RNA1310_989.1} {RNA815_1327.1} |
Cumulative graph for MligTC455_29091
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -4.259 | 2.039 | 0.42492 | 1.00000 | |
| RegionR2 | 2.491 | 2.039 | 0.03846 | 0.22757 | |
| RegionR3 | 0.191 | 2.039 | 0.80348 | 1.00000 | |
| RegionR4 | 0.205 | 2.039 | 0.78076 | 1.00000 | |
| RegionR5 | -0.269 | 2.039 | 0.92813 | 1.00000 | |
| RegionR6 | 0.582 | 2.039 | 0.61916 | 1.00000 | |
| RegionR7 | 0.012 | 2.039 | 0.88958 | 1.00000 | |
| RegionR8 | 1.048 | 2.039 | 0.60849 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 6.984 | 2.039 | 0.11739 | 0.84468 | |
| RegenerationR2 | 0.802 | 2.039 | 0.23475 | 0.68218 | |
| RegenerationR3 | 2.074 | 2.039 | 0.03180 | 0.31833 | |
| RegenerationR4 | 0.844 | 2.039 | 0.35721 | 0.78621 | |
| RegenerationR5 | 1.709 | 2.039 | 0.04158 | 0.33464 | |
| RegenerationR6 | 1.755 | 2.039 | 0.05845 | 0.30336 | |
| RegenerationBL | 1.671 | 2.039 | 0.15373 | 0.46913 | |
| RegenerationTP | 2.296 | 2.039 | 0.07556 | 0.44017 |
Genes with expression patterns similar to MligTC455_29091
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_29091 | 132 | 2.74 | Mlig455_007019 | Neo: - Age: Down-Up-Down |
5 | - | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_007019 {REF} {Length: 4080} {TRANSSPLICED} {RNA1509_13072} {RNA1310_989.1} {RNA815_1327.1} | |
| 2. | MligTC455_29095 | 291 | 6.07 | Mlig455_008520, Mlig455_062905, Mlig455_064803 | Neo: - Age: - |
3.33 | - | 0.714 | 0.844 | 0.790 | 0.982 | - | Mlig455_008520 {REF} {Length: 5586} {RNA1509_55508} {RNA1310_19597} {RNA815_1327.1} Mlig455_062905 {REF} {Length: 2632} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=121.7]; Endonuclease-reverse transcriptase [PF14529.8, score=48.8]} {Smed: dd_Smed_v6_16441_0_5, dd_Smed_v6_16441_0_5, [Score=105, Expect=8e-24]} {RNA1509_13072, RNA1509_29940} {RNA1310_4523, RNA1509_29940} {RNA1509_29940, RNA815_17419} Mlig455_064803 {REF} {Length: 1273} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=121.7]; Endonuclease-reverse transcriptase [PF14529.8, score=48.8]} {Smed: dd_Smed_v6_16441_0_5, dd_Smed_v6_16441_0_5, [Score=105, Expect=8e-24]} {RNA1509_13072} {RNA1310_989.1} {RNA815_1327.1} |
|
| 3. | MligTC455_12946 | 52 | 1.07 | Mlig455_050111 | Neo: - Age: - Regeneration-upregulated R2: 5.740 Regeneration-enriched R2: 5.740 |
1.666 | - | - | - | 0.709 | - | 0.957 | Mlig455_050111 {REF} {Length: 1442} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=50.7]} {Smed: dd_Smed_v6_17171_0_1, dd_Smed_v6_17171_0_1, [Score=167, Expect=3e-48]} | |
| 4. | MligTC455_53071 | 32 | 0.68 | Mlig455_057414 | Neo: - Age: Up-Down-Up |
CASK | 0.953 | - | - | 0.953 | - | - | - | Mlig455_057414 {REF} {Length: 5916} {Pfam: Protein kinase domain [PF00069.27, score=205.8]; Guanylate kinase [PF00625.23, score=201.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=88.9]; PDZ domain [PF00595.26, score=62.9]; L27 domain [PF02828.18, score=58.1]; PDZ domain [PF17820.3, score=29.0]; Variant SH3 domain [PF07653.19, score=23.4]; SH3 domain [PF00018.30, score=21.6]; PDZ domain [PF13180.8, score=19.2]} {Human: ENSG00000147044, CASK, calcium/calmodulin dependent serine protein kinase, [RH, Score=1184, Expect=0.0]} {Mouse: ENSMUSG00000031012, Cask, calcium/calmodulin-dependent serine protein kinase (MAGUK family), [RH, Score=1184, Expect=0.0]} {Dmel: FBgn0013759, CASK, [RH, Score=1030, Expect=0.0]} {Celegans: WBGene00002991, lin-2, [RH, Score=794, Expect=0.0]} {Smed: dd_Smed_v6_7723_0_1, dd_Smed_v6_7723_0_1, [RH, Score=1314, Expect=0.0]} {RNA1509_13322} {RNA1310_1798.3} {RNA815_879} |
| 5. | MligTC455_17966 | 1490 | 31.04 | Mlig455_026737 | Neo: - Age: logFC(26M/2M)=-0.346 Region-specific R2: 3.759 Region-enriched R2: 2.729/0.00000 Regeneration-downregulated R6: -2.271 Regeneration-depleted R6: -2.271 |
0.951 | - | - | 0.951 | - | - | - | Mlig455_026737 {REF} {Length: 1222} {Pfam: YqbF, hypothetical protein domain [PF14553.8, score=36.3]; Zinc-finger of nitric oxide synthase-interacting protein [PF15906.7, score=26.5]; Protein of unknown function (DUF559) [PF04480.14, score=20.7]; REase_MTES_1575 [PF18741.3, score=20.0]} {RNA1509_18273} {RNA1310_34603.1} {RNA815_20381} |
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