TomoSeq data search

Data search

Results for MligTC455_29135

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_29135

1908

39.75

Mlig455_034914

Neo: -

Age: -

Region-enriched R8: 1.494/0.00280
Region-enriched R7: 1.331/0.00063

Regeneration-downregulated TP: -2.060

Regeneration-depleted TP: -2.060

SOGA1

Mlig455_034914 {REF} {Length: 8571} {Pfam: Protein SOGA [PF11365.10, score=30.4]; Growth-arrest specific micro-tubule binding [PF13851.8, score=23.0]; Autophagy protein 16 (ATG16) [PF08614.13, score=22.9]; Fez1 [PF06818.17, score=19.9]; TPR/MLP1/MLP2-like protein [PF07926.14, score=19.4]; Crescentin protein [PF19220.2, score=18.5]} {Human: ENSG00000149639, SOGA1, suppressor of glucose, autophagy associated 1, [RH, Score=122, Expect=6e-27]; ENSG00000168502, MTCL1, microtubule crosslinking factor 1, [RH, Score=119, Expect=5e-26]; ENSG00000255330, AL096711.2, novel transcript, [RH, Score=117, Expect=9e-26]; ENSG00000214338, SOGA3, SOGA family member 3, [RH, Score=117, Expect=9e-26]} {Mouse: ENSMUSG00000055485, Soga1, suppressor of glucose, autophagy associated 1, [RH, Score=127, Expect=9e-29]} {Dmel: FBgn0031869, CG18304, [RH, Score=100, Expect=1e-20]} {Celegans: WBGene00044079, tag-241, [RH, Score=157, Expect=3e-38]} {Smed: dd_Smed_v6_2373_0_2, dd_Smed_v6_2373_0_2, [RH, Score=593, Expect=2e-178]} {RNA1509_3070, RNA1509_57537} {RNA1310_398, RNA1509_57537} {RNA1509_57537, RNA815_2060}

Cumulative graph for MligTC455_29135

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.432	5.423	0.57478	1.00000
RegionR2	-0.701	5.423	0.04839	0.26138
RegionR3	-1.056	5.423	0.00076	0.02408
RegionR4	-0.124	5.423	0.72485	1.00000
RegionR5	-0.906	5.423	0.00239	0.01992
RegionR6	0.395	5.423	0.15849	0.70948
RegionR7	1.331	5.423	0.00001	0.00063
RegionR8	1.494	5.423	0.00003	0.00280

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.071	5.423	0.36097	1.00000
RegenerationR2	0.067	5.423	0.83734	1.00000
RegenerationR3	-0.026	5.423	0.94212	1.00000
RegenerationR4	-0.514	5.423	0.14655	0.57276
RegenerationR5	0.367	5.423	0.28709	0.71531
RegenerationR6	-0.656	5.423	0.05420	0.29173
RegenerationBL	-0.583	5.423	0.08407	0.33960
RegenerationTP	-2.06	5.423	0.00000	0.00012	Specific for TP: -2.060

Genes with expression patterns similar to MligTC455_29135

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_29135	1908	39.75	Mlig455_034914	Neo: - Age: - Region-enriched R8: 1.494/0.00280 Region-enriched R7: 1.331/0.00063 Regeneration-downregulated TP: -2.060 Regeneration-depleted TP: -2.060	SOGA1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_034914 {REF} {Length: 8571} {Pfam: Protein SOGA [PF11365.10, score=30.4]; Growth-arrest specific micro-tubule binding [PF13851.8, score=23.0]; Autophagy protein 16 (ATG16) [PF08614.13, score=22.9]; Fez1 [PF06818.17, score=19.9]; TPR/MLP1/MLP2-like protein [PF07926.14, score=19.4]; Crescentin protein [PF19220.2, score=18.5]} {Human: ENSG00000149639, SOGA1, suppressor of glucose, autophagy associated 1, [RH, Score=122, Expect=6e-27]; ENSG00000168502, MTCL1, microtubule crosslinking factor 1, [RH, Score=119, Expect=5e-26]; ENSG00000255330, AL096711.2, novel transcript, [RH, Score=117, Expect=9e-26]; ENSG00000214338, SOGA3, SOGA family member 3, [RH, Score=117, Expect=9e-26]} {Mouse: ENSMUSG00000055485, Soga1, suppressor of glucose, autophagy associated 1, [RH, Score=127, Expect=9e-29]} {Dmel: FBgn0031869, CG18304, [RH, Score=100, Expect=1e-20]} {Celegans: WBGene00044079, tag-241, [RH, Score=157, Expect=3e-38]} {Smed: dd_Smed_v6_2373_0_2, dd_Smed_v6_2373_0_2, [RH, Score=593, Expect=2e-178]} {RNA1509_3070, RNA1509_57537} {RNA1310_398, RNA1509_57537} {RNA1509_57537, RNA815_2060}
2.	MligTC455_41046	1124	23.42	Mlig455_051459, Mlig455_066689, Mlig455_066716	Neo: - Age: -	SLC16A12	0.969	-	-	-	0.969	-	-	Mlig455_051459 {REF} {Length: 2894} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=107.8]} {Human: ENSG00000152779, SLC16A12, solute carrier family 16 member 12, [Score=118, Expect=2e-27]} {Mouse: ENSMUSG00000009378, Slc16a12, solute carrier family 16 (monocarboxylic acid transporters), member 12, [Score=120, Expect=2e-28]} {Dmel: FBgn0035173, CG13907, [Score=311, Expect=1e-93]} {Celegans: WBGene00003986, mct-4, MonoCarboxylate Transporter family, [Score=303, Expect=2e-91]} {Smed: dd_Smed_v6_10147_0_6, dd_Smed_v6_10147_0_6, [Score=390, Expect=8e-122]} {RNA1509_19921} {RNA1310_4509} {RNA815_6679.1} Mlig455_066689 {REF} {Length: 2901} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=107.2]} {Human: ENSG00000152779, SLC16A12, solute carrier family 16 member 12, [Score=118, Expect=2e-27]} {Mouse: ENSMUSG00000009378, Slc16a12, solute carrier family 16 (monocarboxylic acid transporters), member 12, [Score=120, Expect=2e-28]} {Dmel: FBgn0035173, CG13907, [Score=309, Expect=5e-93]} {Celegans: WBGene00003986, mct-4, MonoCarboxylate Transporter family, [Score=304, Expect=1e-91]} {Smed: dd_Smed_v6_10147_0_6, dd_Smed_v6_10147_0_6, [Score=391, Expect=3e-122]} {RNA1509_19921} {RNA1310_4509, RNA1509_19921} {RNA1509_19921, RNA815_6679.1} Mlig455_066716 {REF} {Length: 2835} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=109.1]} {Human: ENSG00000152779, SLC16A12, solute carrier family 16 member 12, [Score=118, Expect=2e-27]} {Mouse: ENSMUSG00000009378, Slc16a12, solute carrier family 16 (monocarboxylic acid transporters), member 12, [Score=122, Expect=4e-29]} {Dmel: FBgn0035173, CG13907, [Score=305, Expect=9e-92]} {Celegans: WBGene00003986, mct-4, MonoCarboxylate Transporter family, [Score=306, Expect=1e-92]} {Smed: dd_Smed_v6_10147_0_6, dd_Smed_v6_10147_0_6, [Score=387, Expect=1e-120]} {RNA1509_31907} {RNA1310_4354.1, RNA1509_31907} {RNA1509_31907, RNA815_6679.1}
3.	MligTC455_16364	573	11.94	Mlig455_003015, Mlig455_003211	Neo: - Age: - Region-enriched R7: 3.882/0.00000 Region-enriched R2: 3.008/0.00597	UBXN10	0.959	-	-	-	0.959	-	-	Mlig455_003015 {REF} {Length: 3835} {TRANSSPLICED} {Pfam: UBX domain [PF00789.22, score=38.6]} {Human: ENSG00000162543, UBXN10, UBX domain protein 10, [RH, Score=52.4, Expect=4e-07]} {Mouse: ENSMUSG00000043621, Ubxn10, UBX domain protein 10, [RH, Score=56.6, Expect=1e-08]} {RNA1509_24983, RNA1509_31163} {RNA1310_12560, RNA1509_24983} {RNA1509_24983, RNA815_7523} Mlig455_003211 {REF} {Length: 3844} {TRANSSPLICED} {Pfam: UBX domain [PF00789.22, score=38.6]} {Human: ENSG00000162543, UBXN10, UBX domain protein 10, [RH, Score=52.4, Expect=4e-07]} {Mouse: ENSMUSG00000043621, Ubxn10, UBX domain protein 10, [RH, Score=56.2, Expect=2e-08]} {RNA1509_31163} {RNA1310_12560, RNA1509_31163} {RNA1509_31163, RNA815_7523}
4.	MligTC455_16365	217	4.52	Mlig455_003220	Neo: - Age: Down-Down-Down Region-enriched R2: 3.110/0.00601 Region-enriched R7: 2.788/0.00372		0.959	-	-	-	0.959	-	-	Mlig455_003220 {REF} {Length: 3841} {TRANSSPLICED} {RNA1509_31163} {RNA1310_12560} {RNA815_7523}
5.	MligTC455_40950	450	9.38	Mlig455_062491	Neo: - Age: - Regeneration-downregulated R4: -2.281 Regeneration-depleted R4: -2.281	PSMC2	0.959	-	-	-	-	0.959	-	Mlig455_062491 {REF} {Length: 1831} {TRANSSPLICED} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=56.9]; AAA+ lid domain [PF17862.3, score=38.3]} {Human: ENSG00000161057, PSMC2, proteasome 26S subunit, ATPase 2, [Score=289, Expect=4e-97]} {Mouse: ENSMUSG00000028932, Psmc2, proteasome (prosome, macropain) 26S subunit, ATPase 2, [Score=289, Expect=8e-97]} {Dmel: FBgn0028687, Rpt1, Regulatory particle triple-A ATPase 1, [Score=281, Expect=1e-94]} {Celegans: WBGene00004501, rpt-1, 26S protease regulatory subunit 7, [Score=273, Expect=3e-91]} {Smed: dd_Smed_v6_2686_0_1, dd_Smed_v6_2686_0_1, [Score=283, Expect=1e-95]} {RNA1509_10462, RNA1509_16452, RNA1509_37677} {RNA1310_16139, RNA1509_16452, RNA1509_37677} {RNA1509_16452, RNA1509_37677, RNA815_6045}

Berezikov Lab - 2020-2021 © ERIBA