Data search
Results for MligTC455_29136
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_29136 | 214 | 4.46 | Mlig455_046792 | Neo: - Age: - Region-enriched R2: 2.902/0.01311 |
ARMC2 | Mlig455_046792 {REF} {Length: 6550} {Pfam: Rapamycin-insensitive companion of mTOR, N-term [PF14664.8, score=19.1]} {Human: ENSG00000118690, ARMC2, armadillo repeat containing 2, [RH, Score=402, Expect=1e-126]} {Mouse: ENSMUSG00000071324, Armc2, armadillo repeat containing 2, [RH, Score=378, Expect=2e-117]} {Dmel: FBgn0052668, CG32668, [RH, Score=129, Expect=3e-30]} {Smed: dd_Smed_v6_12684_0_1, dd_Smed_v6_12684_0_1, [RH, Score=365, Expect=3e-112]} {RNA1509_7486} {RNA1310_5471, RNA1509_7486} {RNA1509_7486, RNA815_4871} |
Cumulative graph for MligTC455_29136
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.715 | 2.395 | 0.10402 | 0.67829 | |
| RegionR2 | 2.902 | 2.395 | 0.00049 | 0.01311 | |
| RegionR3 | 0.499 | 2.395 | 0.41762 | 0.94247 | |
| RegionR4 | -2.397 | 2.395 | 0.00430 | 0.03234 | |
| RegionR5 | -0.904 | 2.395 | 0.13132 | 0.36859 | |
| RegionR6 | 0.337 | 2.395 | 0.60916 | 1.00000 | |
| RegionR7 | 0.989 | 2.395 | 0.18748 | 0.78978 | |
| RegionR8 | 1.29 | 2.395 | 0.17508 | 0.75367 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.797 | 2.395 | 0.75819 | 1.00000 | |
| RegenerationR2 | -2.353 | 2.395 | 0.00544 | 0.11680 | |
| RegenerationR3 | -0.182 | 2.395 | 0.84531 | 0.99627 | |
| RegenerationR4 | -1.142 | 2.395 | 0.21869 | 0.66660 | |
| RegenerationR5 | 0.019 | 2.395 | 0.95872 | 1.00000 | |
| RegenerationR6 | -2.106 | 2.395 | 0.06143 | 0.31129 | |
| RegenerationBL | -1.459 | 2.395 | 0.28649 | 0.64814 | |
| RegenerationTP | -1.042 | 2.395 | 0.38316 | 0.81741 |
Genes with expression patterns similar to MligTC455_29136
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_29136 | 214 | 4.46 | Mlig455_046792 | Neo: - Age: - Region-enriched R2: 2.902/0.01311 |
ARMC2 | 5 | 1.000 | 1.000 | 1.000 | - | 1.000 | 1.000 | Mlig455_046792 {REF} {Length: 6550} {Pfam: Rapamycin-insensitive companion of mTOR, N-term [PF14664.8, score=19.1]} {Human: ENSG00000118690, ARMC2, armadillo repeat containing 2, [RH, Score=402, Expect=1e-126]} {Mouse: ENSMUSG00000071324, Armc2, armadillo repeat containing 2, [RH, Score=378, Expect=2e-117]} {Dmel: FBgn0052668, CG32668, [RH, Score=129, Expect=3e-30]} {Smed: dd_Smed_v6_12684_0_1, dd_Smed_v6_12684_0_1, [RH, Score=365, Expect=3e-112]} {RNA1509_7486} {RNA1310_5471, RNA1509_7486} {RNA1509_7486, RNA815_4871} |
| 2. | MligTC455_37945 | 128 | 2.66 | Mlig455_050331 | Neo: - Age: Down-Up-Down |
0.956 | - | - | - | - | - | 0.956 | Mlig455_050331 {REF} {Length: 4704} {TRANSSPLICED} {RNA1509_35022, RNA1509_59283} {RNA1310_6390.1, RNA1509_35022, RNA1509_59283} {RNA1509_35022, RNA1509_59283, RNA815_7453} | |
| 3. | MligTC455_50575 | 686 | 14.3 | Mlig455_027195, Mlig455_030702 | Neo: - Age: Up-Down-Up |
RTTN | 0.95 | - | - | - | - | - | 0.950 | Mlig455_027195 {REF} {Length: 6676} {TRANSSPLICED} {Human: ENSG00000176225, RTTN, rotatin, [RH, Score=162, Expect=4e-39]} {Mouse: ENSMUSG00000023066, Rttn, rotatin, [RH, Score=163, Expect=2e-39]} {Smed: dd_Smed_v6_13117_0_1, dd_Smed_v6_13117_0_1, [RH, Score=211, Expect=1e-54]} {RNA1509_6593} {RNA1310_417.1} {RNA815_1837} Mlig455_030702 {REF} {Length: 7065} {TRANSSPLICED} {Human: ENSG00000176225, RTTN, rotatin, [RH, Score=164, Expect=2e-39]} {Mouse: ENSMUSG00000023066, Rttn, rotatin, [Score=157, Expect=1e-37]} {Smed: dd_Smed_v6_13117_0_1, dd_Smed_v6_13117_0_1, [Score=189, Expect=9e-48]} {RNA1509_40573, RNA1509_6593} {RNA1310_417.1, RNA1509_40573, RNA1509_6593} {RNA1509_40573, RNA1509_6593, RNA815_1837} |
Berezikov Lab - 2020-2021 © ERIBA