TomoSeq data search

Data search

Results for MligTC455_29140

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_29140

507

10.56

Mlig455_007108, Mlig455_007146

Neo: -

Age: logFC(26M/2M)=-0.356

PHLPP2

Mlig455_007108 {REF} {Length: 5765} {Pfam: Leucine rich repeat [PF13855.8, score=123.1]; Leucine Rich repeats (2 copies) [PF12799.9, score=103.1]; Protein phosphatase 2C [PF00481.23, score=95.8]; PH domain [PF00169.31, score=27.9]; Leucine Rich repeat [PF13516.8, score=19.1]} {Human: ENSG00000040199, PHLPP2, PH domain and leucine rich repeat protein phosphatase 2, [RH, Score=516, Expect=2e-157]; ENSG00000081913, PHLPP1, PH domain and leucine rich repeat protein phosphatase 1, [RH, Score=510, Expect=2e-152]} {Mouse: ENSMUSG00000031732, Phlpp2, PH domain and leucine rich repeat protein phosphatase 2, [RH, Score=532, Expect=1e-163]; ENSMUSG00000044340, Phlpp1, PH domain and leucine rich repeat protein phosphatase 1, [RH, Score=511, Expect=6e-153]} {Dmel: FBgn0032749, Phlpp, PH domain leucine-rich repeat protein phosphatase, [RH, Score=217, Expect=2e-57]} {Celegans: WBGene00009647, phlp-2, Protein phosphatase PHLPP-like protein, [RH, Score=344, Expect=1e-98]} {Smed: dd_Smed_v6_4770_0_1, dd_Smed_v6_4770_0_1, [Score=103, Expect=5e-22]} {RNA1509_11537} {RNA1310_320.1} {RNA815_3078}

Mlig455_007146 {REF} {Length: 5508} {Pfam: Leucine rich repeat [PF13855.8, score=122.7]; Leucine Rich repeats (2 copies) [PF12799.9, score=99.2]; Protein phosphatase 2C [PF00481.23, score=95.8]; PH domain [PF00169.31, score=28.1]} {Human: ENSG00000040199, PHLPP2, PH domain and leucine rich repeat protein phosphatase 2, [RH, Score=515, Expect=3e-157]; ENSG00000081913, PHLPP1, PH domain and leucine rich repeat protein phosphatase 1, [RH, Score=511, Expect=2e-152]} {Mouse: ENSMUSG00000031732, Phlpp2, PH domain and leucine rich repeat protein phosphatase 2, [RH, Score=532, Expect=2e-163]; ENSMUSG00000044340, Phlpp1, PH domain and leucine rich repeat protein phosphatase 1, [RH, Score=511, Expect=7e-153]} {Dmel: FBgn0032749, Phlpp, PH domain leucine-rich repeat protein phosphatase, [RH, Score=217, Expect=2e-57]} {Celegans: WBGene00009647, phlp-2, Protein phosphatase PHLPP-like protein, [RH, Score=344, Expect=2e-98]} {Smed: dd_Smed_v6_4770_0_1, dd_Smed_v6_4770_0_1, [Score=101, Expect=2e-21]} {RNA1509_11537} {RNA1310_320.1, RNA1509_11537} {RNA1509_11537, RNA815_3078}

Cumulative graph for MligTC455_29140

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.751	3.667	0.53670	1.00000
RegionR2	0.112	3.667	0.82518	1.00000
RegionR3	-0.941	3.667	0.04481	0.37026
RegionR4	-0.069	3.667	0.89580	1.00000
RegionR5	-1.312	3.667	0.00394	0.02901
RegionR6	-0.584	3.667	0.20836	0.78468
RegionR7	0.762	3.667	0.15209	0.72269
RegionR8	1.281	3.667	0.03306	0.35634

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-7.404	3.667	0.07337	0.76132
RegenerationR2	0.317	3.667	0.48349	0.86452
RegenerationR3	0.146	3.667	0.78674	0.97761
RegenerationR4	0.038	3.667	0.93885	1.00000
RegenerationR5	0.462	3.667	0.37544	0.78421
RegenerationR6	0.494	3.667	0.36305	0.70734
RegenerationBL	0.03	3.667	0.95576	1.00000
RegenerationTP	-0.011	3.667	0.98129	1.00000

Genes with expression patterns similar to MligTC455_29140

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_29140	507	10.56	Mlig455_007108, Mlig455_007146	Neo: - Age: logFC(26M/2M)=-0.356	PHLPP2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_007108 {REF} {Length: 5765} {Pfam: Leucine rich repeat [PF13855.8, score=123.1]; Leucine Rich repeats (2 copies) [PF12799.9, score=103.1]; Protein phosphatase 2C [PF00481.23, score=95.8]; PH domain [PF00169.31, score=27.9]; Leucine Rich repeat [PF13516.8, score=19.1]} {Human: ENSG00000040199, PHLPP2, PH domain and leucine rich repeat protein phosphatase 2, [RH, Score=516, Expect=2e-157]; ENSG00000081913, PHLPP1, PH domain and leucine rich repeat protein phosphatase 1, [RH, Score=510, Expect=2e-152]} {Mouse: ENSMUSG00000031732, Phlpp2, PH domain and leucine rich repeat protein phosphatase 2, [RH, Score=532, Expect=1e-163]; ENSMUSG00000044340, Phlpp1, PH domain and leucine rich repeat protein phosphatase 1, [RH, Score=511, Expect=6e-153]} {Dmel: FBgn0032749, Phlpp, PH domain leucine-rich repeat protein phosphatase, [RH, Score=217, Expect=2e-57]} {Celegans: WBGene00009647, phlp-2, Protein phosphatase PHLPP-like protein, [RH, Score=344, Expect=1e-98]} {Smed: dd_Smed_v6_4770_0_1, dd_Smed_v6_4770_0_1, [Score=103, Expect=5e-22]} {RNA1509_11537} {RNA1310_320.1} {RNA815_3078} Mlig455_007146 {REF} {Length: 5508} {Pfam: Leucine rich repeat [PF13855.8, score=122.7]; Leucine Rich repeats (2 copies) [PF12799.9, score=99.2]; Protein phosphatase 2C [PF00481.23, score=95.8]; PH domain [PF00169.31, score=28.1]} {Human: ENSG00000040199, PHLPP2, PH domain and leucine rich repeat protein phosphatase 2, [RH, Score=515, Expect=3e-157]; ENSG00000081913, PHLPP1, PH domain and leucine rich repeat protein phosphatase 1, [RH, Score=511, Expect=2e-152]} {Mouse: ENSMUSG00000031732, Phlpp2, PH domain and leucine rich repeat protein phosphatase 2, [RH, Score=532, Expect=2e-163]; ENSMUSG00000044340, Phlpp1, PH domain and leucine rich repeat protein phosphatase 1, [RH, Score=511, Expect=7e-153]} {Dmel: FBgn0032749, Phlpp, PH domain leucine-rich repeat protein phosphatase, [RH, Score=217, Expect=2e-57]} {Celegans: WBGene00009647, phlp-2, Protein phosphatase PHLPP-like protein, [RH, Score=344, Expect=2e-98]} {Smed: dd_Smed_v6_4770_0_1, dd_Smed_v6_4770_0_1, [Score=101, Expect=2e-21]} {RNA1509_11537} {RNA1310_320.1, RNA1509_11537} {RNA1509_11537, RNA815_3078}
2.	MligTC455_43672	602	12.54	Mlig455_067100	Neo: - Age: -		2.665	0.785	-	0.951	0.929	-	-	Mlig455_067100 {REF} {Length: 2322} {Pfam: Family of unknown function (DUF6328) [PF19853.1, score=18.9]} {RNA1509_54455} {RNA1310_28362, RNA1509_54455} {RNA1509_54455, RNA815_15060}
3.	MligTC455_42115	167	3.49	Mlig455_034257	Neo: - Age: -		1.815	-	-	0.861	0.954	-	-	Mlig455_034257 {REF} {Length: 1854} {Pfam: Glycosyltransferase family 92 [PF01697.29, score=88.5]} {Dmel: FBgn0032506, CG9395, [Score=84.0, Expect=8e-17]} {Smed: dd_Smed_v6_5401_0_1, dd_Smed_v6_5401_0_1, [Score=204, Expect=1e-60]} {RNA1310_14481.1} {RNA815_5740.1}
4.	MligTC455_48224	130	2.7	Mlig455_033977	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.589	GLRA3	1.788	0.951	-	-	0.837	-	-	Mlig455_033977 {REF} {Length: 2696} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=151.9]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=128.7]} {Human: ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=266, Expect=7e-83]; ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=266, Expect=4e-83]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=265, Expect=1e-82]; ENSG00000188828, GLRA4, glycine receptor alpha 4, [Score=259, Expect=8e-81]; ENSG00000166206, GABRB3, gamma-aminobutyric acid type A receptor beta3 subunit, [Score=253, Expect=4e-78]} {Mouse: ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=271, Expect=9e-85]; ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=266, Expect=3e-83]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [Score=264, Expect=2e-82]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=260, Expect=6e-81]} {Dmel: FBgn0024963, GluClalpha, [Score=252, Expect=6e-78]} {Celegans: WBGene00001594, glc-4, Glutamate-gated ChLoride channel, [RH, Score=244, Expect=2e-74]} {Smed: dd_Smed_v6_15331_0_1, dd_Smed_v6_15331_0_1, [Score=221, Expect=4e-66]} {RNA1310_13574.1} {RNA815_10577.1}
5.	MligTC455_24082	1293	26.94	Mlig455_032827	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.760 Region-enriched R4: 2.018/0.00163 Region-enriched R7: 1.592/0.03414 Regeneration-upregulated R2: 2.804 Regeneration-enriched R2: 2.804	MUC4	1.786	-	-	0.824	0.962	-	-	Mlig455_032827 {REF} {Length: 3976} {Pfam: Calcium-binding EGF domain [PF07645.17, score=49.9]; EGF domain [PF12947.9, score=45.4]; von Willebrand factor type D domain [PF00094.27, score=36.9]; Nidogen-like [PF06119.16, score=23.3]; Complement Clr-like EGF-like [PF12662.9, score=22.5]} {Human: ENSG00000278468, MUC4, mucin 4, cell surface associated, [Score=90.1, Expect=1e-17]; ENSG00000145113, MUC4, mucin 4, cell surface associated, [Score=89.7, Expect=2e-17]; ENSG00000277585, MUC4, mucin 4, cell surface associated, [Score=89.7, Expect=2e-17]; ENSG00000273822, MUC4, mucin 4, cell surface associated, [Score=89.7, Expect=2e-17]; ENSG00000278303, MUC4, mucin 4, cell surface associated, [Score=89.7, Expect=2e-17]; ENSG00000273984, MUC4, mucin 4, cell surface associated, [Score=89.7, Expect=2e-17]; ENSG00000276613, MUC4, mucin 4, cell surface associated, [Score=89.7, Expect=2e-17]} {Mouse: ENSMUSG00000079620, Muc4, mucin 4, [Score=87.8, Expect=5e-17]} {Dmel: FBgn0053196, dpy, dumpy, [Score=80.1, Expect=1e-14]} {Celegans: WBGene00022816, fbn-1, FBN-1A.1; FiBrilliN homolog, [Score=75.9, Expect=1e-13]} {Smed: dd_Smed_v6_2649_0_2, dd_Smed_v6_2649_0_2, [Score=75.1, Expect=2e-13]} {RNA1509_37878, RNA1509_41726} {RNA1310_9514, RNA1509_37878, RNA1509_41726} {RNA1509_37878, RNA1509_41726, RNA815_472.1}
6.	MligTC455_42114	188	3.92	Mlig455_034293	Neo: - Age: Down-Up-Up		1.734	-	-	0.757	0.977	-	-	Mlig455_034293 {REF} {Length: 1926} {Pfam: Glycosyltransferase family 92 [PF01697.29, score=89.5]} {Dmel: FBgn0032506, CG9395, [Score=87.4, Expect=7e-18]} {Celegans: WBGene00008763, F13G3.3, Glycosyltransferase family 92 protein F13G3.3, [RH, Score=49.7, Expect=4e-06]} {Smed: dd_Smed_v6_5401_0_1, dd_Smed_v6_5401_0_1, [Score=198, Expect=4e-58]} {RNA1310_14481.1} {RNA815_5740.1}
7.	MligTC455_31727	319	6.64	Mlig455_052802	Neo: - Age: - Region-enriched R2: 1.942/0.03690	BBS7	0.964	-	-	-	-	0.964	-	Mlig455_052802 {REF} {Length: 3681} {TRANSSPLICED} {Pfam: Ciliary BBSome complex subunit 2, middle region [PF14783.8, score=24.7]; FG-GAP-like repeat [PF13517.8, score=19.2]} {Human: ENSG00000138686, BBS7, Bardet-Biedl syndrome 7, [RH, Score=736, Expect=0.0]} {Mouse: ENSMUSG00000037325, Bbs7, Bardet-Biedl syndrome 7 (human), [RH, Score=730, Expect=0.0]} {Celegans: WBGene00003892, osm-12, Bardet-Biedl syndrome 7 protein homolog, [RH, Score=395, Expect=1e-127]} {Smed: dd_Smed_v6_15015_0_1, dd_Smed_v6_15015_0_1, [RH, Score=645, Expect=0.0]} {RNA1509_7138} {RNA1310_7894, RNA1509_7138} {RNA1509_7138, RNA815_2924}
8.	MligTC455_40423	752	15.66	Mlig455_029299, Mlig455_058869	Neo: - Age: Down-Up-Down	CALM1	0.963	-	-	-	-	0.963	-	Mlig455_029299 {REF} {Length: 1144} {Pfam: EF-hand domain pair [PF13833.8, score=47.6]; EF-hand domain pair [PF13499.8, score=39.7]; EF hand [PF00036.34, score=31.4]; EF-hand domain [PF13405.8, score=29.4]; EF-hand domain [PF14658.8, score=24.4]} {Human: ENSG00000198668, CALM1, calmodulin 1, [Score=100, Expect=1e-26]; ENSG00000143933, CALM2, calmodulin 2, [Score=100, Expect=1e-26]; ENSG00000160014, CALM3, calmodulin 3, [Score=100, Expect=1e-26]; ENSG00000178363, CALML3, calmodulin like 3, [Score=95.1, Expect=1e-24]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=100, Expect=8e-27]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=100, Expect=8e-27]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=100, Expect=8e-27]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=98.2, Expect=4e-26]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=98.2, Expect=4e-26]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=98.2, Expect=3e-26]} {RNA1509_16604} {RNA1310_33121} {RNA815_17390} Mlig455_058869 {REF} {Length: 1325} {Pfam: EF-hand domain pair [PF13833.8, score=47.6]; EF-hand domain pair [PF13499.8, score=39.7]; EF hand [PF00036.34, score=31.4]; EF-hand domain [PF13405.8, score=29.4]; EF-hand domain [PF14658.8, score=24.4]} {Human: ENSG00000198668, CALM1, calmodulin 1, [Score=100, Expect=1e-26]; ENSG00000143933, CALM2, calmodulin 2, [Score=100, Expect=1e-26]; ENSG00000160014, CALM3, calmodulin 3, [Score=100, Expect=1e-26]; ENSG00000178363, CALML3, calmodulin like 3, [Score=95.1, Expect=1e-24]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=100, Expect=8e-27]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=100, Expect=8e-27]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=100, Expect=8e-27]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=98.2, Expect=4e-26]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=98.2, Expect=4e-26]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=98.2, Expect=3e-26]} {RNA1509_16604} {RNA1310_33121, RNA1509_16604} {RNA1509_16604, RNA815_17390}

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