Data search
Results for MligTC455_29161
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_29161 | 104 | 2.17 | Mlig455_028451 | Neo: - Age: logFC(26M/2M)=0.976 |
Mlig455_028451 {REF} {Length: 2003} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_28575} {RNA1310_31121} {RNA815_26053} |
Cumulative graph for MligTC455_29161
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -3.598 | 1.995 | 0.51616 | 1.00000 | |
| RegionR2 | 0.051 | 1.995 | 0.85013 | 1.00000 | |
| RegionR3 | 0.473 | 1.995 | 0.64594 | 1.00000 | |
| RegionR4 | 0.476 | 1.995 | 0.68342 | 0.97658 | |
| RegionR5 | 1.044 | 1.995 | 0.26322 | 0.58534 | |
| RegionR6 | 0.937 | 1.995 | 0.37694 | 0.95735 | |
| RegionR7 | -0.165 | 1.995 | 0.91318 | 1.00000 | |
| RegionR8 | 0.78 | 1.995 | 0.62494 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.497 | 1.995 | 0.99996 | 1.00000 | |
| RegenerationR2 | 0.011 | 1.995 | 0.98824 | 1.00000 | |
| RegenerationR3 | 0.405 | 1.995 | 0.60782 | 0.91170 | |
| RegenerationR4 | 1.31 | 1.995 | 0.11827 | 0.52396 | |
| RegenerationR5 | 0.718 | 1.995 | 0.25223 | 0.68538 | |
| RegenerationR6 | 1.139 | 1.995 | 0.10823 | 0.40718 | |
| RegenerationBL | 1.768 | 1.995 | 0.04528 | 0.24354 | |
| RegenerationTP | -1.354 | 1.995 | 0.40969 | 0.83694 |
Genes with expression patterns similar to MligTC455_29161
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_29161 | 104 | 2.17 | Mlig455_028451 | Neo: - Age: logFC(26M/2M)=0.976 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_028451 {REF} {Length: 2003} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_28575} {RNA1310_31121} {RNA815_26053} | |
| 2. | MligTC455_09509 | 46 | 0.95 | Mlig455_042043 | Neo: - Age: - |
0.991 | - | - | 0.991 | - | - | - | Mlig455_042043 {REF} {Length: 1543} {Pfam: SICA C-terminal inner membrane domain [PF12879.9, score=63.2]} {RNA1509_50446} {RNA1310_8738.1} {RNA815_21682.1} | |
| 3. | MligTC455_14755 | 67 | 1.39 | Mlig455_021667, Mlig455_021716 | Neo: - Age: - |
0.971 | - | - | - | - | - | 0.971 | Mlig455_021667 {REF} {Length: 466} {NoTransDecoderORF} {RNA1310_101954} {RNA815_38953} Mlig455_021716 {REF} {Length: 457} {NoTransDecoderORF} {RNA1310_101954} {RNA815_38953} |
|
| 4. | MligTC455_36086 | 1067 | 22.22 | Mlig455_029146 | Neo: - Age: logFC(26M/2M)=-0.343 Regeneration-upregulated BL: 2.147 Regeneration-enriched BL: 2.147 |
CA12 | 0.957 | - | - | - | - | 0.957 | - | Mlig455_029146 {REF} {Length: 5294} {TRANSSPLICED} {Pfam: Eukaryotic-type carbonic anhydrase [PF00194.23, score=226.5]} {Human: ENSG00000074410, CA12, carbonic anhydrase 12, [Score=155, Expect=4e-44]; ENSG00000168748, CA7, carbonic anhydrase 7, [Score=154, Expect=2e-44]} {Mouse: ENSMUSG00000038526, Car14, carbonic anhydrase 14, [Score=161, Expect=1e-46]; ENSMUSG00000032373, Car12, carbonic anhydrase 12, [Score=159, Expect=2e-45]; ENSMUSG00000027562, Car2, carbonic anhydrase 2, [Score=154, Expect=9e-45]} {Dmel: FBgn0027844, CAH1, Carbonic anhydrase 1, [Score=142, Expect=4e-40]} {Celegans: WBGene00000281, cah-3, Putative carbonic anhydrase 3, [Score=124, Expect=1e-33]} {Smed: dd_Smed_v6_5784_0_1, dd_Smed_v6_5784_0_1, [Score=157, Expect=7e-46]} {RNA1509_20720, RNA1509_28119, RNA1509_34508, RNA1509_51922, RNA1509_60129} {RNA1310_14409, RNA1509_20720, RNA1509_34508, RNA1509_51922, RNA1509_60129} {RNA1509_20720, RNA1509_34508, RNA1509_51922, RNA1509_60129, RNA815_10315} |
| 5. | MligTC455_04628 | 258 | 5.36 | Mlig455_013973, Mlig455_035000 | Neo: - Age: logFC(26M/2M)=0.276 |
TMCO4 | 0.955 | - | - | - | - | 0.955 | - | Mlig455_013973 {REF} {Length: 4098} {Pfam: Protein of unknown function (DUF726) [PF05277.14, score=121.8]} {Human: ENSG00000162542, TMCO4, transmembrane and coiled-coil domains 4, [Score=124, Expect=1e-30]} {Mouse: ENSMUSG00000041143, Tmco4, transmembrane and coiled-coil domains 4, [Score=139, Expect=2e-36]} {Celegans: WBGene00018044, F35D11.3, Uncharacterized membrane protein F35D11.3, [Score=134, Expect=1e-34]} {RNA1509_13973} {RNA1310_11691.2} {RNA815_11250.1} Mlig455_035000 {REF} {Length: 3761} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF726) [PF05277.14, score=306.3]; Lecithin:cholesterol acyltransferase [PF02450.17, score=18.7]} {Human: ENSG00000162542, TMCO4, transmembrane and coiled-coil domains 4, [Score=330, Expect=3e-104]} {Mouse: ENSMUSG00000041143, Tmco4, transmembrane and coiled-coil domains 4, [Score=289, Expect=9e-89]} {Celegans: WBGene00018044, F35D11.3, Uncharacterized membrane protein F35D11.3, [Score=311, Expect=1e-97]} {RNA1509_13973, RNA1509_46091} {RNA1310_11626, RNA1509_46091} {RNA1509_46091, RNA815_11250.1} |
| 6. | MligTC455_53493 | 723 | 15.07 | Mlig455_038091 | Neo: - Age: - Regeneration-enriched BL: 2.878 |
JUP | 0.953 | - | - | - | - | 0.953 | - | Mlig455_038091 {REF} {Length: 3940} {TRANSSPLICED} {Pfam: Armadillo/beta-catenin-like repeat [PF00514.25, score=79.4]; Domain of unknown function (DUF3361) [PF11841.10, score=25.9]; Adaptin N terminal region [PF01602.22, score=21.4]; Spinocerebellar ataxia type 10 protein domain [PF09759.11, score=19.2]} {Human: ENSG00000173801, JUP, junction plakoglobin, [RH, Score=443, Expect=9e-144]} {Mouse: ENSMUSG00000001552, Jup, junction plakoglobin, [RH, Score=438, Expect=5e-142]} {Dmel: FBgn0000117, arm, armadillo, [Score=453, Expect=2e-148]} {Celegans: WBGene00001979, hmp-2, Beta-catenin-like protein hmp-2, [RH, Score=224, Expect=8e-63]} {Smed: dd_Smed_v6_2688_0_1, dd_Smed_v6_2688_0_1, [RH, Score=408, Expect=1e-128]} {RNA1509_26269, RNA1509_3591, RNA1509_36038, RNA1509_44904, RNA1509_49343, RNA1509_58527} {RNA1310_2400.1, RNA1509_26269, RNA1509_36038, RNA1509_44904, RNA1509_49343, RNA1509_58527} {RNA1509_26269, RNA1509_36038, RNA1509_44904, RNA1509_49343, RNA1509_58527, RNA815_2793} |
| 7. | MligTC455_34168 | 1708 | 35.58 | Mlig455_019399, Mlig455_019621, Mlig455_059074 | Neo: Neoblast Age: - |
0.951 | - | - | - | - | 0.951 | - | Mlig455_019399 {REF} {Length: 1884} {TRANSSPLICED} {RNA1509_57191} {RNA1310_32310.1} {RNA815_752.1} Mlig455_019621 {REF} {Length: 1095} {TRANSSPLICED} {RNA1509_47698} {RNA1310_45059} {RNA815_21612.1} Mlig455_059074 {REF} {Length: 1224} {TRANSSPLICED} {RNA1509_29563, RNA1509_47698} {RNA1310_45059, RNA1509_29563, RNA1509_47698} {RNA1509_29563, RNA1509_47698, RNA815_21612.1} |
|
| 8. | MligTC455_48030 | 242 | 5.05 | Mlig455_068309 | Neo: - Age: - Regeneration-upregulated BL: 4.179 Regeneration-enriched BL: 4.179 |
SPSB4 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_068309 {REF} {Length: 2561} {TRANSSPLICED} {Pfam: SPRY domain [PF00622.30, score=64.3]; SOCS box [PF07525.18, score=33.5]} {Human: ENSG00000175093, SPSB4, splA/ryanodine receptor domain and SOCS box containing 4, [Score=315, Expect=2e-106]; ENSG00000171621, SPSB1, splA/ryanodine receptor domain and SOCS box containing 1, [Score=312, Expect=2e-105]} {Mouse: ENSMUSG00000039911, Spsb1, splA/ryanodine receptor domain and SOCS box containing 1, [Score=313, Expect=4e-106]; ENSMUSG00000046997, Spsb4, splA/ryanodine receptor domain and SOCS box containing 4, [Score=311, Expect=4e-105]} {Dmel: FBgn0026238, gus, gustavus, [Score=307, Expect=1e-103]} {Celegans: WBGene00021597, spsb-1, SPSB (SPry and Socs Box) family, [RH, Score=261, Expect=8e-84]} {Smed: dd_Smed_v6_9905_0_1, dd_Smed_v6_9905_0_1, [Score=213, Expect=1e-66]} {RNA1509_26491} {RNA1310_11847} {RNA815_5105} |
Berezikov Lab - 2020-2021 © ERIBA