TomoSeq data search

Data search

Results for MligTC455_29191

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_29191	9	0.18	Mlig455_003294	Neo: - Age: -		Mlig455_003294 {REF} {Length: 380} {NoTransDecoderORF} {RNA1509_58867} {RNA1310_14123.1} {RNA815_13001}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_29191

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	1.504	0.59	0.99960	1.00000
RegionR2	-0.076	0.59	0.99925	1.00000
RegionR3	-0.669	0.59	0.99958	1.00000
RegionR4	-0.172	0.59	0.99944	1.00000
RegionR5	-0.922	0.59	0.99961	1.00000
RegionR6	-0.77	0.59	0.99962	1.00000
RegionR7	0.438	0.59	1.00000	1.00000
RegionR8	0.668	0.59	0.99983	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-1.094	0.59	0.99940	1.00000
RegenerationR2	1.299	0.59	0.34087	0.77554
RegenerationR3	1.895	0.59	0.71211	0.95206
RegenerationR4	0.829	0.59	0.80362	0.98748
RegenerationR5	2.249	0.59	0.49755	0.85720
RegenerationR6	2.639	0.59	0.53295	0.82863
RegenerationBL	-0.372	0.59	0.99924	1.00000
RegenerationTP	2.211	0.59	0.78835	1.00000

Genes with expression patterns similar to MligTC455_29191

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_29191	9	0.18	Mlig455_003294	Neo: - Age: -		1	-	-	-	-	1.000	-	Mlig455_003294 {REF} {Length: 380} {NoTransDecoderORF} {RNA1509_58867} {RNA1310_14123.1} {RNA815_13001}
2.	MligTC455_14237	21	0.43	Mlig455_053376	Neo: - Age: Up-Down-Down	PKD1L2	0.997	-	-	-	-	0.997	-	Mlig455_053376 {REF} {Length: 14165} {Pfam: Polycystin cation channel [PF08016.14, score=279.0]; PKD domain [PF00801.22, score=96.3]; REJ domain [PF02010.17, score=93.9]; PKD domain [PF18911.2, score=77.2]; PLAT/LH2 domain [PF01477.25, score=57.5]; Ion transport protein [PF00520.33, score=48.8]} {Human: ENSG00000166473, PKD1L2, polycystin 1 like 2 (gene/pseudogene), [RH, Score=264, Expect=2e-69]} {Mouse: ENSMUSG00000034416, Pkd1l2, polycystic kidney disease 1 like 2, [Score=287, Expect=1e-76]} {Dmel: FBgn0041195, Pkd2, Polycystic kidney disease 2, [Score=149, Expect=2e-35]} {Celegans: WBGene00004035, pkd-2, Polycystin-2, [Score=133, Expect=7e-31]} {Smed: dd_Smed_v6_10962_0_1, dd_Smed_v6_10962_0_1, [Score=514, Expect=4e-146]} {RNA1310_42963} {RNA815_40360}
3.	MligTC455_10577	22	0.46	Mlig455_044548	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_044548 {REF} {Length: 953} {Pfam: Bacterial protein of unknown function (DUF948) [PF06103.13, score=26.2]; YscO-like protein [PF16789.7, score=22.3]; Type III secretion protein YscO [PF07321.14, score=18.7]} {RNA1509_56109} {RNA1310_140905} {RNA815_33461}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_29191

0.18

Mlig455_003294

Neo: -

Age: -

1.000

Mlig455_003294 {REF} {Length: 380} {NoTransDecoderORF} {RNA1509_58867} {RNA1310_14123.1} {RNA815_13001}

MligTC455_14237

0.43

Mlig455_053376

Neo: -

Age: Up-Down-Down

PKD1L2

0.997

Mlig455_053376 {REF} {Length: 14165} {Pfam: Polycystin cation channel [PF08016.14, score=279.0]; PKD domain [PF00801.22, score=96.3]; REJ domain [PF02010.17, score=93.9]; PKD domain [PF18911.2, score=77.2]; PLAT/LH2 domain [PF01477.25, score=57.5]; Ion transport protein [PF00520.33, score=48.8]} {Human: ENSG00000166473, PKD1L2, polycystin 1 like 2 (gene/pseudogene), [RH, Score=264, Expect=2e-69]} {Mouse: ENSMUSG00000034416, Pkd1l2, polycystic kidney disease 1 like 2, [Score=287, Expect=1e-76]} {Dmel: FBgn0041195, Pkd2, Polycystic kidney disease 2, [Score=149, Expect=2e-35]} {Celegans: WBGene00004035, pkd-2, Polycystin-2, [Score=133, Expect=7e-31]} {Smed: dd_Smed_v6_10962_0_1, dd_Smed_v6_10962_0_1, [Score=514, Expect=4e-146]} {RNA1310_42963} {RNA815_40360}

MligTC455_10577

0.46

Mlig455_044548

Neo: -

Age: -

0.952

Mlig455_044548 {REF} {Length: 953} {Pfam: Bacterial protein of unknown function (DUF948) [PF06103.13, score=26.2]; YscO-like protein [PF16789.7, score=22.3]; Type III secretion protein YscO [PF07321.14, score=18.7]} {RNA1509_56109} {RNA1310_140905} {RNA815_33461}