TomoSeq data search

Data search

Results for MligTC455_29210

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_29210	85	1.77	Mlig455_038508	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.535	ANK1	Mlig455_038508 {REF} {Length: 8565} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=654.8]; Ankyrin repeat [PF00023.32, score=488.5]; Ankyrin repeats (many copies) [PF13637.8, score=445.6]; Ankyrin repeat [PF13606.8, score=440.9]; Ankyrin repeats (many copies) [PF13857.8, score=394.3]; Protein of unknown function (DUF3979) [PF13141.8, score=70.0]; PEGA domain [PF08308.13, score=62.5]; QSOX Trx-like domain [PF18108.3, score=46.6]; YfkB-like domain [PF08756.12, score=42.3]; Phage T4 tail fibre [PF03903.15, score=38.4]; Uncharacterized conserved protein (DUF2278) [PF10042.11, score=27.6]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=360, Expect=1e-100]; ENSG00000206560, ANKRD28, ankyrin repeat domain 28, [Score=349, Expect=3e-100]; ENSG00000065413, ANKRD44, ankyrin repeat domain 44, [Score=345, Expect=1e-98]; ENSG00000151150, ANK3, ankyrin 3, [Score=342, Expect=6e-95]} {Mouse: ENSMUSG00000014496, Ankrd28, ankyrin repeat domain 28, [Score=354, Expect=6e-102]; ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=348, Expect=4e-97]; ENSMUSG00000052331, Ankrd44, ankyrin repeat domain 44, [Score=345, Expect=2e-99]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=340, Expect=2e-94]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=345, Expect=3e-98]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=340, Expect=6e-98]} {Smed: dd_Smed_v6_21003_0_1, dd_Smed_v6_21003_0_1, [Score=373, Expect=3e-105]} {RNA1509_11396, RNA1509_39688} {RNA1310_6142.1, RNA1509_11396} {RNA1509_11396, RNA815_6750.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_29210

1.77

Mlig455_038508

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.535

ANK1

Mlig455_038508 {REF} {Length: 8565} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=654.8]; Ankyrin repeat [PF00023.32, score=488.5]; Ankyrin repeats (many copies) [PF13637.8, score=445.6]; Ankyrin repeat [PF13606.8, score=440.9]; Ankyrin repeats (many copies) [PF13857.8, score=394.3]; Protein of unknown function (DUF3979) [PF13141.8, score=70.0]; PEGA domain [PF08308.13, score=62.5]; QSOX Trx-like domain [PF18108.3, score=46.6]; YfkB-like domain [PF08756.12, score=42.3]; Phage T4 tail fibre [PF03903.15, score=38.4]; Uncharacterized conserved protein (DUF2278) [PF10042.11, score=27.6]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=360, Expect=1e-100]; ENSG00000206560, ANKRD28, ankyrin repeat domain 28, [Score=349, Expect=3e-100]; ENSG00000065413, ANKRD44, ankyrin repeat domain 44, [Score=345, Expect=1e-98]; ENSG00000151150, ANK3, ankyrin 3, [Score=342, Expect=6e-95]} {Mouse: ENSMUSG00000014496, Ankrd28, ankyrin repeat domain 28, [Score=354, Expect=6e-102]; ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=348, Expect=4e-97]; ENSMUSG00000052331, Ankrd44, ankyrin repeat domain 44, [Score=345, Expect=2e-99]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=340, Expect=2e-94]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=345, Expect=3e-98]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=340, Expect=6e-98]} {Smed: dd_Smed_v6_21003_0_1, dd_Smed_v6_21003_0_1, [Score=373, Expect=3e-105]} {RNA1509_11396, RNA1509_39688} {RNA1310_6142.1, RNA1509_11396} {RNA1509_11396, RNA815_6750.1}

Cumulative graph for MligTC455_29210

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-3.771	1.826	0.48588	1.00000
RegionR2	0.29	1.826	0.74864	1.00000
RegionR3	-0.106	1.826	0.89163	1.00000
RegionR4	1.367	1.826	0.21490	0.50158
RegionR5	-0.162	1.826	0.90812	1.00000
RegionR6	0.686	1.826	0.51387	1.00000
RegionR7	1.48	1.826	0.21402	0.83028
RegionR8	0.216	1.826	0.82260	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.675	1.826	0.99996	1.00000
RegenerationR2	0.301	1.826	0.59674	0.91442
RegenerationR3	0.576	1.826	0.46363	0.84018
RegenerationR4	-0.638	1.826	0.40425	0.81602
RegenerationR5	-0.367	1.826	0.65587	0.93412
RegenerationR6	0.225	1.826	0.76838	0.96105
RegenerationBL	-2.563	1.826	0.11224	0.39571
RegenerationTP	0.412	1.826	0.71282	1.00000

Genes with expression patterns similar to MligTC455_29210

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_29210	85	1.77	Mlig455_038508	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.535	ANK1	5	-	1.000	1.000	1.000	1.000	1.000	Mlig455_038508 {REF} {Length: 8565} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=654.8]; Ankyrin repeat [PF00023.32, score=488.5]; Ankyrin repeats (many copies) [PF13637.8, score=445.6]; Ankyrin repeat [PF13606.8, score=440.9]; Ankyrin repeats (many copies) [PF13857.8, score=394.3]; Protein of unknown function (DUF3979) [PF13141.8, score=70.0]; PEGA domain [PF08308.13, score=62.5]; QSOX Trx-like domain [PF18108.3, score=46.6]; YfkB-like domain [PF08756.12, score=42.3]; Phage T4 tail fibre [PF03903.15, score=38.4]; Uncharacterized conserved protein (DUF2278) [PF10042.11, score=27.6]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=360, Expect=1e-100]; ENSG00000206560, ANKRD28, ankyrin repeat domain 28, [Score=349, Expect=3e-100]; ENSG00000065413, ANKRD44, ankyrin repeat domain 44, [Score=345, Expect=1e-98]; ENSG00000151150, ANK3, ankyrin 3, [Score=342, Expect=6e-95]} {Mouse: ENSMUSG00000014496, Ankrd28, ankyrin repeat domain 28, [Score=354, Expect=6e-102]; ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=348, Expect=4e-97]; ENSMUSG00000052331, Ankrd44, ankyrin repeat domain 44, [Score=345, Expect=2e-99]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=340, Expect=2e-94]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=345, Expect=3e-98]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=340, Expect=6e-98]} {Smed: dd_Smed_v6_21003_0_1, dd_Smed_v6_21003_0_1, [Score=373, Expect=3e-105]} {RNA1509_11396, RNA1509_39688} {RNA1310_6142.1, RNA1509_11396} {RNA1509_11396, RNA815_6750.1}
2.	MligTC455_35309	151	3.14	Mlig455_012683	Neo: - Age: -	SLC12A9	1.661	-	-	0.952	-	-	0.709	Mlig455_012683 {REF} {Length: 3708} {Pfam: Amino acid permease [PF00324.23, score=232.6]; Solute carrier family 12 [PF03522.17, score=69.3]} {Human: ENSG00000146828, SLC12A9, solute carrier family 12 member 9, [RH, Score=619, Expect=0.0]} {Mouse: ENSMUSG00000037344, Slc12a9, solute carrier family 12 (potassium/chloride transporters), member 9, [RH, Score=616, Expect=0.0]} {Dmel: FBgn0032689, CG10413, [RH, Score=665, Expect=0.0]} {Celegans: WBGene00020207, T04B8.5, [RH, Score=697, Expect=0.0]} {Smed: dd_Smed_v6_1738_0_5, dd_Smed_v6_1738_0_5, [RH, Score=663, Expect=0.0]} {RNA1509_12272} {RNA1310_4317, RNA1509_12272} {RNA1509_12272, RNA815_1748.2}
3.	MligTC455_12383	23	0.48	Mlig455_033507	Neo: - Age: -		0.972	-	-	-	0.972	-	-	Mlig455_033507 {REF} {Length: 795} {NoTransDecoderORF} {RNA1310_83521} {RNA815_11698.2}
4.	MligTC455_14842	21	0.45	Mlig455_041074	Neo: - Age: -		0.968	-	-	-	0.968	-	-	Mlig455_041074 {REF} {Length: 1383} {RNA1310_60383} {RNA815_48502}
5.	MligTC455_29971	111	2.31	Mlig455_006512	Neo: - Age: -	CRB2	0.966	-	-	-	0.966	-	-	Mlig455_006512 {REF} {Length: 4810} {Pfam: EGF-like domain [PF00008.29, score=148.0]; Human growth factor-like EGF [PF12661.9, score=63.1]; Laminin G domain [PF02210.26, score=25.7]} {Human: ENSG00000148204, CRB2, crumbs 2, cell polarity complex component, [RH, Score=360, Expect=8e-105]} {Mouse: ENSMUSG00000035403, Crb2, crumbs family member 2, [RH, Score=358, Expect=3e-104]} {Dmel: FBgn0259685, crb, crumbs, [Score=412, Expect=2e-120]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=201, Expect=5e-52]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=230, Expect=3e-61]} {RNA1509_50019} {RNA1310_14888.1} {RNA815_693.1}
6.	MligTC455_37574	30	0.63	Mlig455_032039	Neo: - Age: -		0.965	-	-	-	0.965	-	-	Mlig455_032039 {REF} {Length: 3799} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=57.5]} {Smed: dd_Smed_v6_13661_0_2, dd_Smed_v6_13661_0_2, [RH, Score=204, Expect=4e-64]} {RNA1509_50200} {RNA1310_35365.2} {RNA815_39051}
7.	MligTC455_31495	86	1.78	Mlig455_035544	Neo: - Age: Up-Down-Up	SLC37A3	0.959	-	-	-	-	0.959	-	Mlig455_035544 {REF} {Length: 4002} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=146.4]; Sugar (and other) transporter [PF00083.26, score=25.1]} {Human: ENSG00000157800, SLC37A3, solute carrier family 37 member 3, [RH, Score=411, Expect=3e-139]} {Mouse: ENSMUSG00000029924, Slc37a3, solute carrier family 37 (glycerol-3-phosphate transporter), member 3, [RH, Score=424, Expect=2e-144]} {Dmel: FBgn0034611, MFS16, Major Facilitator Superfamily Transporter 16, [Score=246, Expect=3e-75]} {Celegans: WBGene00011717, T11G6.2, [RH, Score=416, Expect=3e-141]} {Smed: dd_Smed_v6_1904_0_1, dd_Smed_v6_1904_0_1, [RH, Score=376, Expect=3e-126]} {RNA1509_13102} {RNA1310_18914} {RNA815_7298}
8.	MligTC455_28119	99	2.06	Mlig455_006992	Neo: - Age: -		0.957	-	-	-	-	0.957	-	Mlig455_006992 {REF} {Length: 3827} {NoTransDecoderORF} {RNA1509_53435} {RNA1310_38209} {RNA815_11419.1}
9.	MligTC455_22447	114	2.38	Mlig455_016734	Neo: Irradiation Age: -	TTLL12	0.951	-	-	-	0.951	-	-	Mlig455_016734 {REF} {Length: 8252} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=148.7]; Calx-beta domain [PF03160.16, score=117.1]; 7 transmembrane receptor (Secretin family) [PF00002.26, score=44.2]; GPCR proteolysis site, GPS, motif [PF01825.23, score=23.8]} {Human: ENSG00000100304, TTLL12, tubulin tyrosine ligase like 12, [Score=346, Expect=1e-102]; ENSG00000164199, ADGRV1, adhesion G protein-coupled receptor V1, [Score=332, Expect=1e-90]} {Mouse: ENSMUSG00000016757, Ttll12, tubulin tyrosine ligase-like family, member 12, [Score=343, Expect=7e-102]} {Dmel: FBgn0033225, CG1550, [Score=329, Expect=2e-97]} {Celegans: WBGene00008405, ttll-12, Tubulin--tyrosine ligase-like protein 12, [Score=282, Expect=7e-81]} {Smed: dd_Smed_v6_3332_0_1, dd_Smed_v6_3332_0_1, [RH, Score=337, Expect=3e-100]} {RNA1509_41177} {RNA1310_5342.1, RNA1509_41177} {RNA1509_41177, RNA815_1896}