TomoSeq data search

Data search

Results for MligTC455_29213

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_29213

166

3.46

Mlig455_054809

Neo: Int S/G2/M

Age: -

Region-enriched R2: 4.589/0.00115

Regeneration-upregulated R4: 4.044

Regeneration-enriched R4: 4.044

CWF19L1

Mlig455_054809 {REF} {Length: 4432} {Pfam: Protein similar to CwfJ C-terminus 1 [PF04677.17, score=98.9]; Protein similar to CwfJ C-terminus 2 [PF04676.16, score=34.6]} {Human: ENSG00000095485, CWF19L1, CWF19 like cell cycle control factor 1, [RH, Score=323, Expect=1e-103]} {Mouse: ENSMUSG00000025200, Cwf19l1, CWF19-like 1, cell cycle control (S. pombe), [RH, Score=320, Expect=1e-102]} {Dmel: FBgn0033615, CG7741, [RH, Score=246, Expect=3e-74]} {Celegans: WBGene00017534, F17A9.2, CWF19-like protein 1 homolog, [RH, Score=265, Expect=1e-81]} {Smed: dd_Smed_v6_11359_0_1, dd_Smed_v6_11359_0_1, [RH, Score=315, Expect=3e-101]} {RNA1509_24655, RNA1509_40880} {RNA1310_6613, RNA1509_24655, RNA1509_40880} {RNA1509_24655, RNA1509_40880, RNA815_34738}

Cumulative graph for MligTC455_29213

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-5.132	2.474	0.00577	0.23620
RegionR2	4.589	2.474	0.00002	0.00115
RegionR3	0.471	2.474	0.50164	0.99505
RegionR4	-3.361	2.474	0.00145	0.01392
RegionR5	-0.014	2.474	0.77829	1.00000
RegionR6	-0.185	2.474	0.81869	1.00000
RegionR7	2.39	2.474	0.00701	0.13830
RegionR8	1.241	2.474	0.39513	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	4.661	2.474	0.98203	1.00000
RegenerationR2	2.004	2.474	0.04139	0.33601
RegenerationR3	3.951	2.474	0.00022	0.01940
RegenerationR4	4.044	2.474	0.00016	0.00987	Specific for R4: 4.044
RegenerationR5	2.819	2.474	0.00116	0.05646
RegenerationR6	4.471	2.474	0.00030	0.01723
RegenerationBL	1.646	2.474	0.45065	0.81761
RegenerationTP	1.3	2.474	0.42399	0.84716

Genes with expression patterns similar to MligTC455_29213

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_29213	166	3.46	Mlig455_054809	Neo: Int S/G2/M Age: - Region-enriched R2: 4.589/0.00115 Regeneration-upregulated R4: 4.044 Regeneration-enriched R4: 4.044	CWF19L1	4	1.000	1.000	-	-	1.000	1.000	Mlig455_054809 {REF} {Length: 4432} {Pfam: Protein similar to CwfJ C-terminus 1 [PF04677.17, score=98.9]; Protein similar to CwfJ C-terminus 2 [PF04676.16, score=34.6]} {Human: ENSG00000095485, CWF19L1, CWF19 like cell cycle control factor 1, [RH, Score=323, Expect=1e-103]} {Mouse: ENSMUSG00000025200, Cwf19l1, CWF19-like 1, cell cycle control (S. pombe), [RH, Score=320, Expect=1e-102]} {Dmel: FBgn0033615, CG7741, [RH, Score=246, Expect=3e-74]} {Celegans: WBGene00017534, F17A9.2, CWF19-like protein 1 homolog, [RH, Score=265, Expect=1e-81]} {Smed: dd_Smed_v6_11359_0_1, dd_Smed_v6_11359_0_1, [RH, Score=315, Expect=3e-101]} {RNA1509_24655, RNA1509_40880} {RNA1310_6613, RNA1509_24655, RNA1509_40880} {RNA1509_24655, RNA1509_40880, RNA815_34738}
2.	MligTC455_51784	578	12.05	Mlig455_012214	Neo: - Age: -	B4GALT2	0.982	-	-	-	-	0.982	-	Mlig455_012214 {REF} {Length: 3536} {TRANSSPLICED} {Pfam: N-terminal domain of galactosyltransferase [PF02709.16, score=78.6]; N-terminal region of glycosyl transferase group 7 [PF13733.8, score=76.7]} {Human: ENSG00000117411, B4GALT2, beta-1,4-galactosyltransferase 2, [Score=160, Expect=2e-44]; ENSG00000121578, B4GALT4, beta-1,4-galactosyltransferase 4, [Score=157, Expect=2e-43]; ENSG00000086062, B4GALT1, beta-1,4-galactosyltransferase 1, [Score=154, Expect=6e-42]} {Mouse: ENSMUSG00000022793, B4galt4, UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4, [Score=162, Expect=1e-45]; ENSMUSG00000028541, B4galt2, UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2, [Score=161, Expect=7e-45]} {Dmel: FBgn0027538, beta4GalNAcTA, [Score=159, Expect=4e-44]} {Celegans: WBGene00000269, bre-4, Beta-1,4-N-acetylgalactosaminyltransferase bre-4, [Score=156, Expect=3e-43]} {Smed: dd_Smed_v6_8856_0_1, dd_Smed_v6_8856_0_1, [Score=218, Expect=4e-67]} {RNA1509_13638} {RNA1310_10527.2} {RNA815_4373.1}
3.	MligTC455_23960	5	0.11	Mlig455_070589	Neo: - Age: -	SLC6A1	0.976	-	-	-	-	0.976	-	Mlig455_070589 {REF} {Length: 2387} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=426.1]} {Human: ENSG00000157103, SLC6A1, solute carrier family 6 member 1, [Score=312, Expect=9e-99]; ENSG00000010379, SLC6A13, solute carrier family 6 member 13, [Score=310, Expect=8e-98]; ENSG00000111181, SLC6A12, solute carrier family 6 member 12, [Score=306, Expect=2e-96]} {Mouse: ENSMUSG00000030108, Slc6a13, solute carrier family 6 (neurotransmitter transporter, GABA), member 13, [Score=320, Expect=5e-102]; ENSMUSG00000030109, Slc6a12, solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12, [Score=313, Expect=1e-99]; ENSMUSG00000030310, Slc6a1, solute carrier family 6 (neurotransmitter transporter, GABA), member 1, [Score=311, Expect=1e-98]} {Dmel: FBgn0034911, CG5549, [Score=319, Expect=5e-97]} {Celegans: WBGene00000934, dat-1, Sodium-dependent dopamine transporter, [Score=290, Expect=1e-90]} {Smed: dd_Smed_v6_10458_0_2, dd_Smed_v6_10458_0_2, [Score=298, Expect=2e-93]} {RNA1509_32034} {RNA1310_45592} {RNA815_60993}
4.	MligTC455_23817	11	0.23	Mlig455_064624	Neo: - Age: -		0.973	-	-	-	-	0.973	-	Mlig455_064624 {REF} {Length: 1671} {NoTransDecoderORF} {RNA1509_43103} {RNA1310_27460} {RNA815_22396}
5.	MligTC455_13746	200	4.17	Mlig455_064975, Mlig455_066810	Neo: - Age: - Region-enriched R8: 8.067/0.00000 Region-enriched R7: 3.917/0.01846		0.972	-	-	-	-	0.972	-	Mlig455_064975 {REF} {Length: 2922} {RNA1509_22976} {RNA1310_9502} {RNA815_8881} Mlig455_066810 {REF} {Length: 2922} {RNA1509_22976} {RNA1310_9502} {RNA815_8881}
6.	MligTC455_39442	243	5.06	Mlig455_066956	Neo: Germline Age: - Region-specific R4: 6.144 Region-enriched R4: 3.145/0.00006		0.969	-	-	-	-	0.969	-	Mlig455_066956 {REF} {Length: 4885} {RNA1509_14447, RNA1509_37172, RNA1509_54039} {RNA1310_38764, RNA1509_14447, RNA1509_37172, RNA1509_54039} {RNA1509_14447, RNA1509_37172, RNA1509_54039, RNA815_8420}
7.	MligTC455_06567	96	2	Mlig455_066796, Mlig455_066861	Neo: Germline Age: -		0.964	-	-	-	-	0.964	-	Mlig455_066796 {REF} {Length: 575} {RNA1509_46305} {RNA1310_73354} {RNA815_46725} Mlig455_066861 {REF} {Length: 539} {RNA1509_46305} {RNA1310_73354, RNA1509_46305} {RNA1509_46305, RNA815_46725}
8.	MligTC455_17744	152	3.16	Mlig455_004612	Neo: - Age: logFC(26M/2M)=-0.493 Region-enriched R2: 4.143/0.01116	INTS2	0.964	-	-	-	-	-	0.964	Mlig455_004612 {REF} {Length: 5765} {Pfam: Integrator complex subunit 2 [PF14750.8, score=434.4]} {Human: ENSG00000108506, INTS2, integrator complex subunit 2, [Score=168, Expect=2e-41]} {Mouse: ENSMUSG00000018068, Ints2, integrator complex subunit 2, [Score=168, Expect=1e-41]} {Dmel: FBgn0030858, IntS2, Integrator 2, [Score=162, Expect=3e-40]} {Smed: dd_Smed_v6_7197_0_2, dd_Smed_v6_7197_0_2, [Score=187, Expect=6e-48]} {RNA1509_16977} {RNA1310_2572} {RNA815_13711}
9.	MligTC455_42483	23	0.48	Mlig455_058290	Neo: - Age: -		0.964	-	-	-	-	0.964	-	Mlig455_058290 {REF} {Length: 1476} {NoTransDecoderORF} {RNA1509_25786} {RNA1310_64824} {RNA815_44462}
10.	MligTC455_38214	32	0.66	Mlig455_011964	Neo: - Age: -		0.957	-	-	-	-	0.957	-	Mlig455_011964 {REF} {Length: 1513} {Pfam: THAP domain [PF05485.14, score=36.6]} {RNA1310_22137} {RNA815_40823}
11.	MligTC455_52962	100	2.08	Mlig455_018565	Neo: - Age: Up-Down-Down Region-enriched R2: 4.692/0.01678	ZC3H3	0.955	-	-	-	-	0.955	-	Mlig455_018565 {REF} {Length: 2655} {TRANSSPLICED} {Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=24.1]} {Human: ENSG00000014164, ZC3H3, zinc finger CCCH-type containing 3, [RH, Score=96.7, Expect=4e-21]} {Mouse: ENSMUSG00000075600, Zc3h3, zinc finger CCCH type containing 3, [RH, Score=99.4, Expect=4e-22]} {Dmel: FBgn0035900, ZC3H3, [RH, Score=67.4, Expect=6e-12]} {RNA1509_34328, RNA1509_9607} {RNA1310_10963.1, RNA1509_34328, RNA1509_9607} {RNA1509_34328, RNA1509_9607, RNA815_18673}
12.	MligTC455_10960	13	0.28	Mlig455_025471, Mlig455_071146	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_025471 {REF} {Length: 1421} {RNA1310_50786.2} Mlig455_071146 {REF} {Length: 1430} {RNA1310_50786.2}
13.	MligTC455_10288	17	0.35	Mlig455_019678	Neo: - Age: -		0.95	-	-	-	-	0.950	-	Mlig455_019678 {REF} {Length: 1244} {NoTransDecoderORF} {RNA1509_44393} {RNA1310_97891}
14.	MligTC455_17125	20	0.42	Mlig455_039979	Neo: - Age: -		0.95	-	-	-	-	0.950	-	Mlig455_039979 {REF} {Length: 3458} {RNA1509_18232} {RNA1310_1081} {RNA815_9914}
15.	MligTC455_51815	60	1.25	Mlig455_002796	Neo: - Age: Down-Down-Up	ZDHHC17	0.95	-	-	-	-	0.950	-	Mlig455_002796 {REF} {Length: 3687} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=123.4]; Ankyrin repeats (many copies) [PF13857.8, score=92.9]; Ankyrin repeats (many copies) [PF13637.8, score=90.4]; DHHC palmitoyltransferase [PF01529.22, score=80.7]; Ankyrin repeat [PF13606.8, score=78.2]; Ankyrin repeat [PF00023.32, score=73.6]} {Human: ENSG00000186908, ZDHHC17, zinc finger DHHC-type containing 17, [Score=160, Expect=3e-41]} {Mouse: ENSMUSG00000035798, Zdhhc17, zinc finger, DHHC domain containing 17, [Score=157, Expect=1e-40]} {Dmel: FBgn0029137, Patsas, [Score=311, Expect=5e-98]} {Celegans: WBGene00019257, dhhc-13, Palmitoyltransferase, [Score=87.0, Expect=9e-18]} {Smed: dd_Smed_v6_16314_0_1, dd_Smed_v6_16314_0_1, [Score=217, Expect=3e-63]} {RNA1509_25007} {RNA1310_9910} {RNA815_13589}

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