Data search


search
Exact
Search

Results for MligTC455_29253

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_29253 12 0.26 Mlig455_066136

Neo: -

Age: -

DOP1A Mlig455_066136 {REF} {Length: 883} {Pfam: Dopey, N-terminal [PF04118.16, score=285.0]} {Human: ENSG00000083097, DOP1A, DOP1 leucine zipper like protein A, [RH, Score=263, Expect=3e-70]} {Mouse: ENSMUSG00000034973, Dop1a, DOP1 leucine zipper like protein A, [RH, Score=262, Expect=2e-73]} {Dmel: FBgn0034400, CG15099, [RH, Score=263, Expect=3e-70]} {Celegans: WBGene00003905, pad-1, [RH, Score=228, Expect=7e-60]} {Smed: dd_Smed_v6_6117_0_1, dd_Smed_v6_6117_0_1, [RH, Score=236, Expect=2e-62]} {RNA1509_49830} {RNA1310_48563.2} {RNA815_31243}

Cumulative graph for MligTC455_29253

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 - - - -
RegionR2 - - - -
RegionR3 - - - -
RegionR4 - - - -
RegionR5 - - - -
RegionR6 - - - -
RegionR7 - - - -
RegionR8 - - - -

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 - - - -
RegenerationR2 - - - -
RegenerationR3 - - - -
RegenerationR4 - - - -
RegenerationR5 - - - -
RegenerationR6 - - - -
RegenerationBL - - - -
RegenerationTP - - - -


Genes with expression patterns similar to MligTC455_29253

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_29253 12 0.26 Mlig455_066136

Neo: -

Age: -

DOP1A 1 - - - - - 1.000 Mlig455_066136 {REF} {Length: 883} {Pfam: Dopey, N-terminal [PF04118.16, score=285.0]} {Human: ENSG00000083097, DOP1A, DOP1 leucine zipper like protein A, [RH, Score=263, Expect=3e-70]} {Mouse: ENSMUSG00000034973, Dop1a, DOP1 leucine zipper like protein A, [RH, Score=262, Expect=2e-73]} {Dmel: FBgn0034400, CG15099, [RH, Score=263, Expect=3e-70]} {Celegans: WBGene00003905, pad-1, [RH, Score=228, Expect=7e-60]} {Smed: dd_Smed_v6_6117_0_1, dd_Smed_v6_6117_0_1, [RH, Score=236, Expect=2e-62]} {RNA1509_49830} {RNA1310_48563.2} {RNA815_31243}
2. MligTC455_01644 28 0.59 Mlig455_025704

Neo: Int S/G2/M

Age: -

0.966 - - - - - 0.966 Mlig455_025704 {REF} {Length: 1084} {RNA1310_25031} {RNA815_28020}
3. MligTC455_20477 38 0.79 Mlig455_010992

Neo: -

Age: Up-Up-Down

0.965 - - - - - 0.965 Mlig455_010992 {REF} {Length: 886} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_7002} {RNA1310_1775.1} {RNA815_2421}
4. MligTC455_26938 64 1.33 Mlig455_006444

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.315

0.964 - - - - - 0.964 Mlig455_006444 {REF} {Length: 2859} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=23.4]} {Dmel: FBgn0259985, Mppe, Metallophosphoesterase, [RH, Score=107, Expect=1e-25]} {Celegans: WBGene00014079, ZK792.7, [RH, Score=114, Expect=2e-28]} {Smed: dd_Smed_v6_12322_0_1, dd_Smed_v6_12322_0_1, [RH, Score=132, Expect=2e-35]} {RNA1509_44297, RNA1509_50271} {RNA1310_18464, RNA1509_44297} {RNA1509_44297, RNA815_17058.1}
5. MligTC455_37203 15 0.3 Mlig455_016211

Neo: -

Age: -

TRAF2 0.962 - - - - - 0.962 Mlig455_016211 {REF} {Length: 3900} {TRANSSPLICED} {Pfam: TRAF-type zinc finger [PF02176.20, score=30.7]} {Human: ENSG00000127191, TRAF2, TNF receptor associated factor 2, [Score=58.5, Expect=6e-09]} {Mouse: ENSMUSG00000026942, Traf2, TNF receptor-associated factor 2, [Score=59.3, Expect=3e-09]} {Smed: dd_Smed_v6_17551_0_2, dd_Smed_v6_17551_0_2, [Score=50.8, Expect=5e-07]} {RNA1509_7329} {RNA1310_29315} {RNA815_5375}
6. MligTC455_32778 38 0.8 Mlig455_001655

Neo: Irradiation

Age: Up-Down-Down

0.955 - - - - - 0.955 Mlig455_001655 {REF} {Length: 1600} {RNA1509_58771} {RNA1310_5707} {RNA815_6105.1}
7. MligTC455_33345 73 1.53 Mlig455_022775

Neo: -

Age: Up-Down-Down

ITPR2 0.953 - - - - - 0.953 Mlig455_022775 {REF} {Length: 10477} {Pfam: RIH domain [PF01365.23, score=93.1]; RyR and IP3R Homology associated [PF08454.13, score=68.6]; Inositol 1,4,5-trisphosphate/ryanodine receptor [PF08709.13, score=68.1]; MIR domain [PF02815.21, score=57.0]} {Human: ENSG00000123104, ITPR2, inositol 1,4,5-trisphosphate receptor type 2, [Score=204, Expect=1e-51]} {Mouse: ENSMUSG00000030287, Itpr2, inositol 1,4,5-triphosphate receptor 2, [Score=206, Expect=3e-52]; ENSMUSG00000042644, Itpr3, inositol 1,4,5-triphosphate receptor 3, [Score=199, Expect=3e-50]} {Dmel: FBgn0010051, Itp-r83A, Inositol 1,4,5,-tris-phosphate receptor, [Score=157, Expect=1e-37]} {Celegans: WBGene00002173, itr-1, Inositol 1,4,5-trisphosphate receptor itr-1, [Score=146, Expect=2e-34]} {Smed: dd_Smed_v6_3814_1_1, dd_Smed_v6_3814_1_1, [RH, Score=3019, Expect=0.0]} {RNA1509_31887} {RNA1310_193.1} {RNA815_9899}
8. MligTC455_14827 119 2.49 Mlig455_063374

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 4.453

PLD2 0.952 - - - - - 0.952 Mlig455_063374 {REF} {Length: 3039} {Human: ENSG00000129219, PLD2, phospholipase D2, [Score=159, Expect=2e-39]; ENSG00000075651, PLD1, phospholipase D1, [Score=152, Expect=6e-37]} {Mouse: ENSMUSG00000020828, Pld2, phospholipase D2, [Score=160, Expect=6e-40]; ENSMUSG00000027695, Pld1, phospholipase D1, [Score=152, Expect=3e-37]} {Dmel: FBgn0033075, Pld, Phospholipase D, [Score=154, Expect=7e-38]} {Celegans: WBGene00004040, pld-1, PhosphoLipase D; Phospholipase D, [Score=141, Expect=7e-34]} {Smed: dd_Smed_v6_61149_0_1, dd_Smed_v6_61149_0_1, [Score=155, Expect=3e-41]} {RNA1509_11206} {RNA1310_656} {RNA815_27370}
9. MligTC455_06567 96 2 Mlig455_066796, Mlig455_066861

Neo: Germline

Age: -

0.95 - - - - - 0.950

Mlig455_066796 {REF} {Length: 575} {RNA1509_46305} {RNA1310_73354} {RNA815_46725}

Mlig455_066861 {REF} {Length: 539} {RNA1509_46305} {RNA1310_73354, RNA1509_46305} {RNA1509_46305, RNA815_46725}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA