Data search
Results for MligTC455_29256
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_29256 | 30 | 0.62 | Mlig455_034651 | Neo: - Age: Up-Down-Down |
Mlig455_034651 {REF} {Length: 4852} {NoTransDecoderORF} {RNA1509_23036, RNA1509_32843, RNA1509_58494} {RNA1310_6887.1, RNA1509_23036, RNA1509_32843, RNA1509_58494} {RNA1509_23036, RNA1509_32843, RNA1509_58494, RNA815_28689.1} |
Cumulative graph for MligTC455_29256
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 2.73 | 0.981 | 1.00000 | 1.00000 | |
| RegionR2 | -4.768 | 0.981 | 1.00000 | 1.00000 | |
| RegionR3 | -3.573 | 0.981 | 1.00000 | 1.00000 | |
| RegionR4 | 3.31 | 0.981 | 0.04205 | 0.17141 | |
| RegionR5 | -0.309 | 0.981 | 0.62462 | 0.97927 | |
| RegionR6 | -0.138 | 0.981 | 0.63394 | 1.00000 | |
| RegionR7 | 0.943 | 0.981 | 0.44807 | 1.00000 | |
| RegionR8 | 1.804 | 0.981 | 0.27180 | 0.89493 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -3.339 | 0.981 | 0.99986 | 1.00000 | |
| RegenerationR2 | 3.399 | 0.981 | 0.01738 | 0.21617 | |
| RegenerationR3 | 2.278 | 0.981 | 0.20125 | 0.63657 | |
| RegenerationR4 | -0.238 | 0.981 | 0.73891 | 0.96738 | |
| RegenerationR5 | 0.384 | 0.981 | 0.85356 | 1.00000 | |
| RegenerationR6 | 0.566 | 0.981 | 0.70719 | 0.92881 | |
| RegenerationBL | -1.346 | 0.981 | 0.59137 | 0.94092 | |
| RegenerationTP | -1.526 | 0.981 | 0.29621 | 0.74149 |
Genes with expression patterns similar to MligTC455_29256
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_29256 | 30 | 0.62 | Mlig455_034651 | Neo: - Age: Up-Down-Down |
3 | - | - | - | 1.000 | 1.000 | 1.000 | Mlig455_034651 {REF} {Length: 4852} {NoTransDecoderORF} {RNA1509_23036, RNA1509_32843, RNA1509_58494} {RNA1310_6887.1, RNA1509_23036, RNA1509_32843, RNA1509_58494} {RNA1509_23036, RNA1509_32843, RNA1509_58494, RNA815_28689.1} | |
| 2. | MligTC455_36710 | 47 | 0.99 | Mlig455_013150 | Neo: - Age: - |
0.958 | - | - | - | - | 0.958 | - | Mlig455_013150 {REF} {Length: 474} {NoTransDecoderORF} {RNA1310_64101} {RNA815_38499} | |
| 3. | MligTC455_33167 | 416 | 8.66 | Mlig455_063071 | Neo: - Age: - Region-enriched R5: 1.683/0.00006 |
SARM1 | 0.954 | - | - | - | - | 0.954 | - | Mlig455_063071 {REF} {Length: 4307} {Pfam: TIR domain [PF13676.8, score=65.0]} {Human: ENSG00000004139, SARM1, sterile alpha and TIR motif containing 1, [Score=54.7, Expect=3e-07]} {Mouse: ENSMUSG00000050132, Sarm1, sterile alpha and HEAT/Armadillo motif containing 1, [Score=50.8, Expect=8e-06]} {RNA1509_29716, RNA1509_30913} {RNA1310_4887.1, RNA1509_29716, RNA1509_30913} {RNA1509_29716, RNA1509_30913, RNA815_10844} |
| 4. | MligTC455_49378 | 301 | 6.27 | Mlig455_044613 | Neo: Irradiation Age: Up-Down-Down |
SLC2A12 | 0.953 | - | - | - | - | 0.953 | - | Mlig455_044613 {REF} {Length: 3832} {TRANSSPLICED} {Pfam: Sugar (and other) transporter [PF00083.26, score=303.8]; Major Facilitator Superfamily [PF07690.18, score=104.7]} {Human: ENSG00000146411, SLC2A12, solute carrier family 2 member 12, [RH, Score=296, Expect=5e-91]} {Mouse: ENSMUSG00000037490, Slc2a12, solute carrier family 2 (facilitated glucose transporter), member 12, [RH, Score=290, Expect=6e-89]} {Dmel: FBgn0033644, Tret1-2, Trehalose transporter 1-2, [Score=147, Expect=5e-38]} {Celegans: WBGene00010811, hmit-1.3, H(+) MyoInositol coTransporter, [Score=184, Expect=4e-50]} {Smed: dd_Smed_v6_10218_0_2, dd_Smed_v6_10218_0_2, [Score=180, Expect=4e-49]} {RNA1509_20175} {RNA1310_8567, RNA1509_20175} {RNA1509_20175, RNA815_9686} |
Berezikov Lab - 2020-2021 © ERIBA