TomoSeq data search

Data search

Results for MligTC455_29259

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_29259	1743	36.30	Mlig455_066305	Neo: Int S/G2/M Age: - Region-enriched R4: 1.098/0.02264 Region-enriched R5: 1.088/0.00157	RARS	Mlig455_066305 {REF} {Length: 3490} {TRANSSPLICED} {Pfam: tRNA synthetases class I (R) [PF00750.21, score=440.1]; DALR anticodon binding domain [PF05746.17, score=93.1]; Arginyl tRNA synthetase N terminal domain [PF03485.18, score=85.0]} {Human: ENSG00000113643, RARS, arginyl-tRNA synthetase, [RH, Score=784, Expect=0.0]} {Mouse: ENSMUSG00000018848, Rars, arginyl-tRNA synthetase, [RH, Score=781, Expect=0.0]} {Dmel: FBgn0027093, ArgRS, Arginyl-tRNA synthetase, [RH, Score=702, Expect=0.0]} {Celegans: WBGene00004679, rars-1, Probable arginine--tRNA ligase, cytoplasmic, [RH, Score=610, Expect=0.0]} {Smed: dd_Smed_v6_3682_0_1, dd_Smed_v6_3682_0_1, [RH, Score=714, Expect=0.0]} {RNA1509_3496, RNA1509_53739} {RNA1310_10073, RNA1509_53739} {RNA1509_53739, RNA815_1406}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_29259

1743

36.30

Mlig455_066305

Neo: Int S/G2/M

Age: -

Region-enriched R4: 1.098/0.02264
Region-enriched R5: 1.088/0.00157

RARS

Mlig455_066305 {REF} {Length: 3490} {TRANSSPLICED} {Pfam: tRNA synthetases class I (R) [PF00750.21, score=440.1]; DALR anticodon binding domain [PF05746.17, score=93.1]; Arginyl tRNA synthetase N terminal domain [PF03485.18, score=85.0]} {Human: ENSG00000113643, RARS, arginyl-tRNA synthetase, [RH, Score=784, Expect=0.0]} {Mouse: ENSMUSG00000018848, Rars, arginyl-tRNA synthetase, [RH, Score=781, Expect=0.0]} {Dmel: FBgn0027093, ArgRS, Arginyl-tRNA synthetase, [RH, Score=702, Expect=0.0]} {Celegans: WBGene00004679, rars-1, Probable arginine--tRNA ligase, cytoplasmic, [RH, Score=610, Expect=0.0]} {Smed: dd_Smed_v6_3682_0_1, dd_Smed_v6_3682_0_1, [RH, Score=714, Expect=0.0]} {RNA1509_3496, RNA1509_53739} {RNA1310_10073, RNA1509_53739} {RNA1509_53739, RNA815_1406}

Cumulative graph for MligTC455_29259

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.705	5.289	0.36793	1.00000
RegionR2	-0.965	5.289	0.01167	0.11093
RegionR3	-0.53	5.289	0.10611	0.56928
RegionR4	1.098	5.289	0.00271	0.02264
RegionR5	1.088	5.289	0.00009	0.00157
RegionR6	0.024	5.289	0.94014	1.00000
RegionR7	0.034	5.289	0.93094	1.00000
RegionR8	-0.045	5.289	0.93374	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.477	5.289	0.62084	1.00000
RegenerationR2	0.079	5.289	0.81495	0.99439
RegenerationR3	0.441	5.289	0.22679	0.66190
RegenerationR4	-0.287	5.289	0.41643	0.82401
RegenerationR5	-0.039	5.289	0.90122	1.00000
RegenerationR6	0.413	5.289	0.24655	0.59491
RegenerationBL	0.548	5.289	0.13260	0.43389
RegenerationTP	-0.48	5.289	0.28943	0.73489

Genes with expression patterns similar to MligTC455_29259

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_29259	1743	36.3	Mlig455_066305	Neo: Int S/G2/M Age: - Region-enriched R4: 1.098/0.02264 Region-enriched R5: 1.088/0.00157	RARS	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_066305 {REF} {Length: 3490} {TRANSSPLICED} {Pfam: tRNA synthetases class I (R) [PF00750.21, score=440.1]; DALR anticodon binding domain [PF05746.17, score=93.1]; Arginyl tRNA synthetase N terminal domain [PF03485.18, score=85.0]} {Human: ENSG00000113643, RARS, arginyl-tRNA synthetase, [RH, Score=784, Expect=0.0]} {Mouse: ENSMUSG00000018848, Rars, arginyl-tRNA synthetase, [RH, Score=781, Expect=0.0]} {Dmel: FBgn0027093, ArgRS, Arginyl-tRNA synthetase, [RH, Score=702, Expect=0.0]} {Celegans: WBGene00004679, rars-1, Probable arginine--tRNA ligase, cytoplasmic, [RH, Score=610, Expect=0.0]} {Smed: dd_Smed_v6_3682_0_1, dd_Smed_v6_3682_0_1, [RH, Score=714, Expect=0.0]} {RNA1509_3496, RNA1509_53739} {RNA1310_10073, RNA1509_53739} {RNA1509_53739, RNA815_1406}
2.	MligTC455_29416	1512	31.5	Mlig455_027486, Mlig455_046044	Neo: Int S/G2/M Age: -	EED	1.792	-	-	-	0.826	0.966	-	Mlig455_027486 {REF} {Length: 1749} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=31.7]} {Human: ENSG00000074266, EED, embryonic ectoderm development, [RH, Score=320, Expect=3e-105]} {Mouse: ENSMUSG00000030619, Eed, embryonic ectoderm development, [RH, Score=320, Expect=2e-105]} {Dmel: FBgn0000588, esc, extra sexcombs, [RH, Score=305, Expect=5e-100]} {Celegans: WBGene00003224, mes-6, Polycomb protein mes-6, [RH, Score=93.2, Expect=2e-20]} {Smed: dd_Smed_v6_7526_0_2, dd_Smed_v6_7526_0_2, [RH, Score=320, Expect=7e-106]} {RNA1509_20410} {RNA1310_18492, RNA1509_20410} {RNA1509_20410, RNA815_8708.1} Mlig455_046044 {REF} {Length: 3166} {Pfam: WD domain, G-beta repeat [PF00400.34, score=33.5]} {Human: ENSG00000074266, EED, embryonic ectoderm development, [Score=257, Expect=2e-82]} {Mouse: ENSMUSG00000030619, Eed, embryonic ectoderm development, [Score=257, Expect=1e-82]} {Dmel: FBgn0032391, escl, [Score=254, Expect=2e-81]} {Celegans: WBGene00003224, mes-6, Polycomb protein mes-6, [Score=81.3, Expect=5e-17]} {Smed: dd_Smed_v6_7526_0_2, dd_Smed_v6_7526_0_2, [Score=277, Expect=9e-91]} {RNA1509_20410} {RNA1310_18492} {RNA815_8708.2}
3.	MligTC455_46702	2176	45.34	Mlig455_066084	Neo: Int S/G2/M Age: -	FECH	1.675	-	-	-	-	0.966	0.709	Mlig455_066084 {REF} {Length: 1592} {TRANSSPLICED} {Pfam: Ferrochelatase [PF00762.21, score=347.4]} {Human: ENSG00000066926, FECH, ferrochelatase, [RH, Score=417, Expect=2e-144]} {Mouse: ENSMUSG00000024588, Fech, ferrochelatase, [RH, Score=449, Expect=5e-157]} {Dmel: FBgn0266268, FeCH, Ferrochelatase, [RH, Score=413, Expect=2e-143]} {Smed: dd_Smed_v6_6639_0_1, dd_Smed_v6_6639_0_1, [RH, Score=394, Expect=7e-136]} {RNA1509_30909, RNA1509_4795} {RNA1310_8085.1, RNA1509_30909, RNA1509_4795} {RNA1509_30909, RNA1509_4795, RNA815_8203}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_29259

1743

36.3

Mlig455_066305

Neo: Int S/G2/M

Age: -

Region-enriched R4: 1.098/0.02264
Region-enriched R5: 1.088/0.00157

RARS

1.000

MligTC455_29416

1512

31.5

Mlig455_027486, Mlig455_046044

Neo: Int S/G2/M

Age: -

EED

1.792

0.826

0.966

Mlig455_027486 {REF} {Length: 1749} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=31.7]} {Human: ENSG00000074266, EED, embryonic ectoderm development, [RH, Score=320, Expect=3e-105]} {Mouse: ENSMUSG00000030619, Eed, embryonic ectoderm development, [RH, Score=320, Expect=2e-105]} {Dmel: FBgn0000588, esc, extra sexcombs, [RH, Score=305, Expect=5e-100]} {Celegans: WBGene00003224, mes-6, Polycomb protein mes-6, [RH, Score=93.2, Expect=2e-20]} {Smed: dd_Smed_v6_7526_0_2, dd_Smed_v6_7526_0_2, [RH, Score=320, Expect=7e-106]} {RNA1509_20410} {RNA1310_18492, RNA1509_20410} {RNA1509_20410, RNA815_8708.1}

Mlig455_046044 {REF} {Length: 3166} {Pfam: WD domain, G-beta repeat [PF00400.34, score=33.5]} {Human: ENSG00000074266, EED, embryonic ectoderm development, [Score=257, Expect=2e-82]} {Mouse: ENSMUSG00000030619, Eed, embryonic ectoderm development, [Score=257, Expect=1e-82]} {Dmel: FBgn0032391, escl, [Score=254, Expect=2e-81]} {Celegans: WBGene00003224, mes-6, Polycomb protein mes-6, [Score=81.3, Expect=5e-17]} {Smed: dd_Smed_v6_7526_0_2, dd_Smed_v6_7526_0_2, [Score=277, Expect=9e-91]} {RNA1509_20410} {RNA1310_18492} {RNA815_8708.2}

MligTC455_46702

2176

45.34

Mlig455_066084

Neo: Int S/G2/M

Age: -

FECH

1.675

0.966

0.709

Mlig455_066084 {REF} {Length: 1592} {TRANSSPLICED} {Pfam: Ferrochelatase [PF00762.21, score=347.4]} {Human: ENSG00000066926, FECH, ferrochelatase, [RH, Score=417, Expect=2e-144]} {Mouse: ENSMUSG00000024588, Fech, ferrochelatase, [RH, Score=449, Expect=5e-157]} {Dmel: FBgn0266268, FeCH, Ferrochelatase, [RH, Score=413, Expect=2e-143]} {Smed: dd_Smed_v6_6639_0_1, dd_Smed_v6_6639_0_1, [RH, Score=394, Expect=7e-136]} {RNA1509_30909, RNA1509_4795} {RNA1310_8085.1, RNA1509_30909, RNA1509_4795} {RNA1509_30909, RNA1509_4795, RNA815_8203}