Data search
Results for MligTC455_29291
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_29291 | 505 | 10.51 | Mlig455_006940, Mlig455_017956 | Neo: - Age: logFC(26M/2M)=-0.409 |
SELENOI | Mlig455_006940 {REF} {Length: 351} {NoTransDecoderORF} {RNA1509_24370} {RNA1310_50424.1} {RNA815_11509.1} Mlig455_017956 {REF} {Length: 2884} {Pfam: CDP-alcohol phosphatidyltransferase [PF01066.23, score=51.3]} {Human: ENSG00000138018, SELENOI, selenoprotein I, [Score=305, Expect=2e-100]} {Mouse: ENSMUSG00000075703, Selenoi, selenoprotein I, [RH, Score=305, Expect=6e-101]} {Dmel: FBgn0053116, CG33116, [RH, Score=302, Expect=3e-99]} {Celegans: WBGene00018797, F54D7.2, [RH, Score=293, Expect=3e-96]} {Smed: dd_Smed_v6_6886_0_1, dd_Smed_v6_6886_0_1, [RH, Score=325, Expect=9e-109]} {RNA1509_24370, RNA1509_43108, RNA1509_51893} {RNA1310_14632, RNA1509_24370, RNA1509_43108, RNA1509_51893} {RNA1509_24370, RNA1509_43108, RNA1509_51893, RNA815_11509.1} |
Cumulative graph for MligTC455_29291
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.038 | 3.837 | 0.97111 | 1.00000 | |
| RegionR2 | -0.088 | 3.837 | 0.85622 | 1.00000 | |
| RegionR3 | 0.332 | 3.837 | 0.40320 | 0.93125 | |
| RegionR4 | 1.16 | 3.837 | 0.01769 | 0.09329 | |
| RegionR5 | 0.459 | 3.837 | 0.20285 | 0.49483 | |
| RegionR6 | 0.256 | 3.837 | 0.53358 | 1.00000 | |
| RegionR7 | -0.353 | 3.837 | 0.50847 | 1.00000 | |
| RegionR8 | -1.804 | 3.837 | 0.02056 | 0.27960 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.449 | 3.837 | 0.15141 | 0.89398 | |
| RegenerationR2 | -0.196 | 3.837 | 0.63735 | 0.93056 | |
| RegenerationR3 | -0.583 | 3.837 | 0.19654 | 0.63188 | |
| RegenerationR4 | -0.543 | 3.837 | 0.25674 | 0.70468 | |
| RegenerationR5 | -0.733 | 3.837 | 0.08581 | 0.45143 | |
| RegenerationR6 | -0.841 | 3.837 | 0.08201 | 0.35771 | |
| RegenerationBL | 0.717 | 3.837 | 0.22519 | 0.57454 | |
| RegenerationTP | -0.181 | 3.837 | 0.81079 | 1.00000 |
Genes with expression patterns similar to MligTC455_29291
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_29291 | 505 | 10.51 | Mlig455_006940, Mlig455_017956 | Neo: - Age: logFC(26M/2M)=-0.409 |
SELENOI | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_006940 {REF} {Length: 351} {NoTransDecoderORF} {RNA1509_24370} {RNA1310_50424.1} {RNA815_11509.1} Mlig455_017956 {REF} {Length: 2884} {Pfam: CDP-alcohol phosphatidyltransferase [PF01066.23, score=51.3]} {Human: ENSG00000138018, SELENOI, selenoprotein I, [Score=305, Expect=2e-100]} {Mouse: ENSMUSG00000075703, Selenoi, selenoprotein I, [RH, Score=305, Expect=6e-101]} {Dmel: FBgn0053116, CG33116, [RH, Score=302, Expect=3e-99]} {Celegans: WBGene00018797, F54D7.2, [RH, Score=293, Expect=3e-96]} {Smed: dd_Smed_v6_6886_0_1, dd_Smed_v6_6886_0_1, [RH, Score=325, Expect=9e-109]} {RNA1509_24370, RNA1509_43108, RNA1509_51893} {RNA1310_14632, RNA1509_24370, RNA1509_43108, RNA1509_51893} {RNA1509_24370, RNA1509_43108, RNA1509_51893, RNA815_11509.1} |
| 2. | MligTC455_25959 | 453 | 9.44 | Mlig455_023213 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.340 Region-enriched R4: 2.491/0.00064 |
0.963 | - | - | - | - | 0.963 | - | Mlig455_023213 {REF} {Length: 2999} {TRANSSPLICED} {Pfam: PTB domain (IRS-1 type) [PF02174.19, score=25.1]} {RNA1509_27081} {RNA1310_31981} {RNA815_11740} | |
| 3. | MligTC455_19838 | 947 | 19.73 | Mlig455_050416 | Neo: - Age: - |
RNF8 | 0.953 | - | - | - | - | 0.953 | - | Mlig455_050416 {REF} {Length: 3179} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=44.1]; FHA domain [PF00498.28, score=38.4]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=37.8]; Ring finger domain [PF13639.8, score=36.4]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=35.9]; RING-type zinc-finger [PF13445.8, score=29.7]; zinc finger of C3HC4-type, RING [PF15227.8, score=26.7]; Cortactin-binding protein-2 [PF09727.11, score=26.6]; zinc-RING finger domain [PF14634.8, score=22.6]; zinc RING finger of MSL2 [PF16685.7, score=22.1]; RING-H2 zinc finger domain [PF12678.9, score=22.0]; Zinc knuckle [PF00098.25, score=20.1]} {Human: ENSG00000112130, RNF8, ring finger protein 8, [RH, Score=104, Expect=2e-23]} {Mouse: ENSMUSG00000035235, Trim13, tripartite motif-containing 13, [Score=54.7, Expect=2e-07]; ENSMUSG00000034317, Trim59, tripartite motif-containing 59, [Score=52.0, Expect=1e-06]} {Dmel: FBgn0039150, CG13605, [Score=53.1, Expect=6e-07]} {Celegans: WBGene00011365, T02C1.1, Uncharacterized RING finger protein T02C1.1, [RH, Score=54.7, Expect=1e-08]} {Smed: dd_Smed_v6_3477_0_1, dd_Smed_v6_3477_0_1, [Score=52.4, Expect=2e-07]} {RNA1509_38420, RNA1509_49891, RNA1509_54925} {RNA1310_8468.1, RNA1509_38420, RNA1509_49891, RNA1509_54925} {RNA1509_38420, RNA1509_49891, RNA1509_54925, RNA815_11806} |
| 4. | MligTC455_22191 | 983 | 20.49 | Mlig455_037426, Mlig455_037496 | Neo: - Age: - Region-enriched R5: 1.310/0.00527 |
0.951 | - | - | - | - | 0.951 | - | Mlig455_037426 {REF} {Length: 1387} {TRANSSPLICED} {RNA1509_21163, RNA1509_26312} {RNA1310_42598, RNA1509_21163, RNA1509_26312} {RNA1509_21163, RNA1509_26312, RNA815_21773} Mlig455_037496 {REF} {Length: 642} {TRANSSPLICED} {RNA1509_21163} {RNA1310_73990} {RNA815_21773} |
Berezikov Lab - 2020-2021 © ERIBA