TomoSeq data search

Data search

Results for MligTC455_29308

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_29308	625	13.01	Mlig455_062784	Neo: - Age: - Region-enriched R2: 1.396/0.04697		Mlig455_062784 {REF} {Length: 750} {NoTransDecoderORF} {RNA1509_39298} {RNA1310_31641, RNA1509_39298} {RNA1509_39298, RNA815_27648}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_29308

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.468	3.888	0.15598	0.77491
RegionR2	1.396	3.888	0.00310	0.04697
RegionR3	1.006	3.888	0.01274	0.17879
RegionR4	0.194	3.888	0.68456	0.97736
RegionR5	0.362	3.888	0.37296	0.72622
RegionR6	0.721	3.888	0.09031	0.55255
RegionR7	-1.104	3.888	0.06693	0.49716
RegionR8	-1.107	3.888	0.10004	0.59409

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-1.614	3.888	0.32813	1.00000
RegenerationR2	-0.677	3.888	0.10024	0.50116
RegenerationR3	0.06	3.888	0.88995	1.00000
RegenerationR4	0.349	3.888	0.47907	0.85816
RegenerationR5	-0.027	3.888	0.95300	1.00000
RegenerationR6	-0.901	3.888	0.07767	0.34842
RegenerationBL	-2.099	3.888	0.01118	0.10765
RegenerationTP	0.929	3.888	0.14420	0.56574

Genes with expression patterns similar to MligTC455_29308

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_29308	625	13.01	Mlig455_062784	Neo: - Age: - Region-enriched R2: 1.396/0.04697		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_062784 {REF} {Length: 750} {NoTransDecoderORF} {RNA1509_39298} {RNA1310_31641, RNA1509_39298} {RNA1509_39298, RNA815_27648}
2.	MligTC455_32966	2208	46.01	Mlig455_016517, Mlig455_070880	Neo: - Age: Down-Up-Down	CALML5	2.423	-	0.732	0.740	0.951	-	-	Mlig455_016517 {REF} {Length: 3353} {Pfam: EF hand [PF00036.34, score=87.9]; EF-hand domain pair [PF13499.8, score=84.9]; EF-hand domain pair [PF13833.8, score=70.3]; EF-hand domain [PF13405.8, score=67.7]; EF hand [PF13202.8, score=44.0]; EF-hand domain [PF14658.8, score=26.9]; Ca2+ insensitive EF hand [PF08726.12, score=22.9]; Family of unknown function (DUF5580) [PF17743.3, score=18.2]} {Human: ENSG00000178372, CALML5, calmodulin like 5, [Score=70.9, Expect=2e-15]} {Mouse: ENSMUSG00000033765, Calm4, calmodulin 4, [Score=77.4, Expect=4e-18]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=50.4, Expect=4e-08]} {Celegans: WBGene00000285, cal-1, Calmodulin-like protein, [Score=82.4, Expect=3e-20]} {Smed: dd_Smed_v6_11976_0_1, dd_Smed_v6_11976_0_1, [Score=72.0, Expect=3e-16]} {RNA1509_47303} {RNA1310_48128, RNA1509_47303} {RNA1509_47303, RNA815_20196} Mlig455_070880 {REF} {Length: 1489} {Pfam: EF hand [PF00036.34, score=84.9]; EF-hand domain pair [PF13499.8, score=81.3]; EF-hand domain pair [PF13833.8, score=67.9]; EF-hand domain [PF13405.8, score=64.9]; EF hand [PF13202.8, score=43.9]; EF-hand domain [PF14658.8, score=26.2]; Ca2+ insensitive EF hand [PF08726.12, score=22.5]; Family of unknown function (DUF5580) [PF17743.3, score=17.6]} {Human: ENSG00000178372, CALML5, calmodulin like 5, [Score=70.9, Expect=2e-15]} {Mouse: ENSMUSG00000033765, Calm4, calmodulin 4, [Score=77.4, Expect=4e-18]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=50.4, Expect=4e-08]} {Celegans: WBGene00000285, cal-1, Calmodulin-like protein, [Score=80.9, Expect=1e-19]} {Smed: dd_Smed_v6_11976_0_1, dd_Smed_v6_11976_0_1, [Score=71.2, Expect=5e-16]} {RNA1509_47303} {RNA1310_48128} {RNA815_20196}
3.	MligTC455_00832	699	14.56	Mlig455_006115, Mlig455_049816	Neo: - Age: Down-Up-Up Region-enriched R4: 2.548/0.02058 Region-enriched R3: 2.431/0.01183	LRIG3	1.694	-	-	-	-	0.740	0.954	Mlig455_006115 {REF} {Length: 231} {NoTransDecoderORF} {RNA1509_37269} Mlig455_049816 {REF} {Length: 3502} {Pfam: Leucine rich repeat [PF13855.8, score=73.0]; Leucine Rich repeats (2 copies) [PF12799.9, score=44.6]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=26.6]} {Human: ENSG00000139263, LRIG3, leucine rich repeats and immunoglobulin like domains 3, [Score=61.2, Expect=5e-09]} {Mouse: ENSMUSG00000020140, Lgr5, leucine rich repeat containing G protein coupled receptor 5, [Score=58.5, Expect=3e-08]} {Dmel: FBgn0028872, CG18095, [Score=59.3, Expect=1e-08]} {Celegans: WBGene00020649, sma-10, Leucine-rich repeats and immunoglobulin-like domains protein sma-10, [Score=53.9, Expect=5e-07]} {RNA1509_8817} {RNA1310_2409} {RNA815_590.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_29308

625

13.01

Mlig455_062784

Neo: -

Age: -

Region-enriched R2: 1.396/0.04697

1.000

Mlig455_062784 {REF} {Length: 750} {NoTransDecoderORF} {RNA1509_39298} {RNA1310_31641, RNA1509_39298} {RNA1509_39298, RNA815_27648}

MligTC455_32966

2208

46.01

Mlig455_016517, Mlig455_070880

Neo: -

Age: Down-Up-Down

CALML5

2.423

0.732

0.740

0.951

Mlig455_016517 {REF} {Length: 3353} {Pfam: EF hand [PF00036.34, score=87.9]; EF-hand domain pair [PF13499.8, score=84.9]; EF-hand domain pair [PF13833.8, score=70.3]; EF-hand domain [PF13405.8, score=67.7]; EF hand [PF13202.8, score=44.0]; EF-hand domain [PF14658.8, score=26.9]; Ca2+ insensitive EF hand [PF08726.12, score=22.9]; Family of unknown function (DUF5580) [PF17743.3, score=18.2]} {Human: ENSG00000178372, CALML5, calmodulin like 5, [Score=70.9, Expect=2e-15]} {Mouse: ENSMUSG00000033765, Calm4, calmodulin 4, [Score=77.4, Expect=4e-18]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=50.4, Expect=4e-08]} {Celegans: WBGene00000285, cal-1, Calmodulin-like protein, [Score=82.4, Expect=3e-20]} {Smed: dd_Smed_v6_11976_0_1, dd_Smed_v6_11976_0_1, [Score=72.0, Expect=3e-16]} {RNA1509_47303} {RNA1310_48128, RNA1509_47303} {RNA1509_47303, RNA815_20196}

Mlig455_070880 {REF} {Length: 1489} {Pfam: EF hand [PF00036.34, score=84.9]; EF-hand domain pair [PF13499.8, score=81.3]; EF-hand domain pair [PF13833.8, score=67.9]; EF-hand domain [PF13405.8, score=64.9]; EF hand [PF13202.8, score=43.9]; EF-hand domain [PF14658.8, score=26.2]; Ca2+ insensitive EF hand [PF08726.12, score=22.5]; Family of unknown function (DUF5580) [PF17743.3, score=17.6]} {Human: ENSG00000178372, CALML5, calmodulin like 5, [Score=70.9, Expect=2e-15]} {Mouse: ENSMUSG00000033765, Calm4, calmodulin 4, [Score=77.4, Expect=4e-18]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=50.4, Expect=4e-08]} {Celegans: WBGene00000285, cal-1, Calmodulin-like protein, [Score=80.9, Expect=1e-19]} {Smed: dd_Smed_v6_11976_0_1, dd_Smed_v6_11976_0_1, [Score=71.2, Expect=5e-16]} {RNA1509_47303} {RNA1310_48128} {RNA815_20196}

MligTC455_00832

699

14.56

Mlig455_006115, Mlig455_049816

Neo: -

Age: Down-Up-Up

Region-enriched R4: 2.548/0.02058
Region-enriched R3: 2.431/0.01183

LRIG3

1.694

0.740

0.954

Mlig455_006115 {REF} {Length: 231} {NoTransDecoderORF} {RNA1509_37269}

Mlig455_049816 {REF} {Length: 3502} {Pfam: Leucine rich repeat [PF13855.8, score=73.0]; Leucine Rich repeats (2 copies) [PF12799.9, score=44.6]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=26.6]} {Human: ENSG00000139263, LRIG3, leucine rich repeats and immunoglobulin like domains 3, [Score=61.2, Expect=5e-09]} {Mouse: ENSMUSG00000020140, Lgr5, leucine rich repeat containing G protein coupled receptor 5, [Score=58.5, Expect=3e-08]} {Dmel: FBgn0028872, CG18095, [Score=59.3, Expect=1e-08]} {Celegans: WBGene00020649, sma-10, Leucine-rich repeats and immunoglobulin-like domains protein sma-10, [Score=53.9, Expect=5e-07]} {RNA1509_8817} {RNA1310_2409} {RNA815_590.1}