Data search
Results for MligTC455_29338
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_29338 | 204 | 4.26 | Mlig455_047072 | Neo: - Age: - |
Mlig455_047072 {REF} {Length: 2357} {Pfam: Integrase core domain [PF00665.28, score=53.5]; Integrase core domain [PF13683.8, score=24.5]} {Smed: dd_Smed_v6_1574_6_73, dd_Smed_v6_1574_6_73, [Score=65.1, Expect=6e-12]} {RNA1509_21798} {RNA1310_44461} {RNA815_22373} |
Cumulative graph for MligTC455_29338
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -3.993 | 2.733 | 0.45767 | 1.00000 | |
| RegionR2 | 0.341 | 2.733 | 0.74144 | 1.00000 | |
| RegionR3 | -0.468 | 2.733 | 0.95684 | 1.00000 | |
| RegionR4 | 0.656 | 2.733 | 0.58111 | 0.89736 | |
| RegionR5 | 1.424 | 2.733 | 0.11879 | 0.34389 | |
| RegionR6 | 1.489 | 2.733 | 0.14430 | 0.67948 | |
| RegionR7 | -0.248 | 2.733 | 0.92829 | 1.00000 | |
| RegionR8 | 0.8 | 2.733 | 0.62653 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.572 | 2.733 | 0.99995 | 1.00000 | |
| RegenerationR2 | 1.19 | 2.733 | 0.13587 | 0.56280 | |
| RegenerationR3 | 2.353 | 2.733 | 0.01562 | 0.22821 | |
| RegenerationR4 | 1.961 | 2.733 | 0.03288 | 0.29298 | |
| RegenerationR5 | 0.856 | 2.733 | 0.28253 | 0.71149 | |
| RegenerationR6 | 1.226 | 2.733 | 0.12927 | 0.44198 | |
| RegenerationBL | 1.658 | 2.733 | 0.09037 | 0.35217 | |
| RegenerationTP | 1.777 | 2.733 | 0.13883 | 0.55658 |
Genes with expression patterns similar to MligTC455_29338
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_29338 | 204 | 4.26 | Mlig455_047072 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_047072 {REF} {Length: 2357} {Pfam: Integrase core domain [PF00665.28, score=53.5]; Integrase core domain [PF13683.8, score=24.5]} {Smed: dd_Smed_v6_1574_6_73, dd_Smed_v6_1574_6_73, [Score=65.1, Expect=6e-12]} {RNA1509_21798} {RNA1310_44461} {RNA815_22373} | |
| 2. | MligTC455_22885 | 267 | 5.57 | Mlig455_063215 | Neo: - Age: - |
NIPBL | 0.962 | - | - | - | - | 0.962 | - | Mlig455_063215 {REF} {Length: 3862} {Pfam: Sister chromatid cohesion C-terminus [PF12830.9, score=199.5]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=22.1]} {Human: ENSG00000164190, NIPBL, NIPBL, cohesin loading factor, [Score=412, Expect=7e-125]} {Mouse: ENSMUSG00000022141, Nipbl, NIPBL cohesin loading factor, [Score=411, Expect=9e-125]} {Dmel: FBgn0026401, Nipped-B, [Score=345, Expect=2e-102]} {Celegans: WBGene00004166, pqn-85, Nipped-B-like protein pqn-85, [Score=241, Expect=5e-67]} {Smed: dd_Smed_v6_3927_0_2, dd_Smed_v6_3927_0_2, [Score=397, Expect=4e-120]} {RNA1509_40869} {RNA1310_2931} {RNA815_211.1} |
| 3. | MligTC455_25705 | 827 | 17.22 | Mlig455_021270 | Neo: - Age: - Region-enriched R6: 2.555/0.01551 |
LAMB1 | 0.956 | - | - | - | - | 0.956 | - | Mlig455_021270 {REF} {Length: 6132} {Pfam: Laminin EGF domain [PF00053.26, score=315.1]; Laminin N-terminal (Domain VI) [PF00055.19, score=163.3]; Crescentin protein [PF19220.2, score=25.9]} {Human: ENSG00000091136, LAMB1, laminin subunit beta 1, [RH, Score=853, Expect=0.0]; ENSG00000172037, LAMB2, laminin subunit beta 2, [RH, Score=823, Expect=0.0]} {Mouse: ENSMUSG00000002900, Lamb1, laminin B1, [RH, Score=858, Expect=0.0]} {Dmel: FBgn0261800, LanB1, [RH, Score=861, Expect=0.0]} {Celegans: WBGene00002247, lam-1, LAMinin related. See also lmb, [RH, Score=853, Expect=0.0]} {Smed: dd_Smed_v6_6093_0_1, dd_Smed_v6_6093_0_1, [RH, Score=427, Expect=8e-123]} {RNA1509_3908} {RNA1310_668.1, RNA1509_3908} {RNA1509_3908, RNA815_1065} |
| 4. | MligTC455_45133 | 1102 | 22.97 | Mlig455_029424 | Neo: - Age: Up-Down-Down |
LAMC1 | 0.952 | - | - | - | - | 0.952 | - | Mlig455_029424 {REF} {Length: 4934} {Pfam: Laminin EGF domain [PF00053.26, score=234.3]; Laminin B (Domain IV) [PF00052.20, score=43.2]} {Human: ENSG00000135862, LAMC1, laminin subunit gamma 1, [Score=687, Expect=0.0]; ENSG00000050555, LAMC3, laminin subunit gamma 3, [Score=654, Expect=0.0]} {Mouse: ENSMUSG00000026478, Lamc1, laminin, gamma 1, [Score=681, Expect=0.0]; ENSMUSG00000026840, Lamc3, laminin gamma 3, [Score=647, Expect=0.0]} {Dmel: FBgn0267348, LanB2, Laminin B2, [Score=704, Expect=0.0]} {Celegans: WBGene00016913, lam-2, Laminin-like protein lam-2, [Score=644, Expect=0.0]} {Smed: dd_Smed_v6_7359_0_1, dd_Smed_v6_7359_0_1, [Score=608, Expect=0.0]} {RNA1509_19604} {RNA1310_816} {RNA815_1605} |
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