Data search


search
Exact
Search

Results for MligTC455_29354

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_29354 923 19.23 Mlig455_066340

Neo: -

Age: -

SLC39A11 Mlig455_066340 {REF} {Length: 3811} {Pfam: ZIP Zinc transporter [PF02535.24, score=76.8]; HIT zinc finger [PF04438.18, score=32.8]} {Human: ENSG00000285189, SLC39A11, solute carrier family 39 member 11, [RH, Score=290, Expect=1e-91]; ENSG00000133195, SLC39A11, solute carrier family 39 member 11, [RH, Score=290, Expect=1e-91]} {Mouse: ENSMUSG00000041654, Slc39a11, solute carrier family 39 (metal ion transporter), member 11, [RH, Score=281, Expect=1e-88]} {Dmel: FBgn0033665, Zip48C, Zinc/iron regulated transporter-related protein 48C, [RH, Score=270, Expect=3e-84]} {Celegans: WBGene00019077, zipt-11, Zrt (ZRT), Irt-(IRT-) like Protein Transporter, [RH, Score=277, Expect=2e-87]} {Smed: dd_Smed_v6_11200_0_1, dd_Smed_v6_11200_0_1, [RH, Score=105, Expect=1e-24]} {RNA1509_16579, RNA1509_34316} {RNA1310_24853, RNA1509_34316} {RNA1509_34316, RNA815_13725}

Cumulative graph for MligTC455_29354

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.609 4.599 0.56565 1.00000
RegionR2 -0.679 4.599 0.11597 0.42139
RegionR3 0.388 4.599 0.23362 0.77562
RegionR4 0.945 4.599 0.02234 0.11030
RegionR5 0.496 4.599 0.10452 0.31428
RegionR6 -0.182 4.599 0.60492 1.00000
RegionR7 0.115 4.599 0.78371 1.00000
RegionR8 -0.474 4.599 0.39793 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.507 4.599 0.71081 1.00000
RegenerationR2 -0.361 4.599 0.33115 0.76807
RegenerationR3 -0.422 4.599 0.27000 0.70421
RegenerationR4 -0.441 4.599 0.27196 0.71781
RegenerationR5 -0.254 4.599 0.47630 0.84508
RegenerationR6 0.06 4.599 0.87916 1.00000
RegenerationBL -0.254 4.599 0.58764 0.93783
RegenerationTP -0.617 4.599 0.24026 0.68627


Genes with expression patterns similar to MligTC455_29354

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_29354 923 19.23 Mlig455_066340

Neo: -

Age: -

SLC39A11 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_066340 {REF} {Length: 3811} {Pfam: ZIP Zinc transporter [PF02535.24, score=76.8]; HIT zinc finger [PF04438.18, score=32.8]} {Human: ENSG00000285189, SLC39A11, solute carrier family 39 member 11, [RH, Score=290, Expect=1e-91]; ENSG00000133195, SLC39A11, solute carrier family 39 member 11, [RH, Score=290, Expect=1e-91]} {Mouse: ENSMUSG00000041654, Slc39a11, solute carrier family 39 (metal ion transporter), member 11, [RH, Score=281, Expect=1e-88]} {Dmel: FBgn0033665, Zip48C, Zinc/iron regulated transporter-related protein 48C, [RH, Score=270, Expect=3e-84]} {Celegans: WBGene00019077, zipt-11, Zrt (ZRT), Irt-(IRT-) like Protein Transporter, [RH, Score=277, Expect=2e-87]} {Smed: dd_Smed_v6_11200_0_1, dd_Smed_v6_11200_0_1, [RH, Score=105, Expect=1e-24]} {RNA1509_16579, RNA1509_34316} {RNA1310_24853, RNA1509_34316} {RNA1509_34316, RNA815_13725}
2. MligTC455_39822 1735 36.15 Mlig455_020060, Mlig455_066486

Neo: -

Age: Down-Up-Up

NUDT2 0.952 - - - - - 0.952

Mlig455_020060 {REF} {Length: 1010} {TRANSSPLICED} {Pfam: NUDIX domain [PF00293.30, score=67.8]} {Human: ENSG00000164978, NUDT2, nudix hydrolase 2, [Score=91.3, Expect=1e-23]} {Mouse: ENSMUSG00000028443, Nudt2, nudix (nucleoside diphosphate linked moiety X)-type motif 2, [Score=92.0, Expect=4e-24]} {Dmel: FBgn0051713, Apf, diadenosine tetraphosphate hydrolase, [Score=74.7, Expect=1e-17]} {Celegans: WBGene00003581, ndx-4, Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical], [Score=87.8, Expect=9e-23]} {RNA1509_8916} {RNA1310_26977} {RNA815_15384}

Mlig455_066486 {REF} {Length: 1007} {TRANSSPLICED} {Pfam: NUDIX domain [PF00293.30, score=67.9]} {Human: ENSG00000164978, NUDT2, nudix hydrolase 2, [Score=90.9, Expect=2e-23]} {Mouse: ENSMUSG00000028443, Nudt2, nudix (nucleoside diphosphate linked moiety X)-type motif 2, [Score=91.3, Expect=8e-24]} {Dmel: FBgn0051713, Apf, diadenosine tetraphosphate hydrolase, [Score=75.5, Expect=8e-18]} {Celegans: WBGene00003581, ndx-4, Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical], [Score=89.4, Expect=2e-23]} {RNA1509_23391} {RNA1310_26977, RNA1509_23391} {RNA1509_23391, RNA815_15384}
3. MligTC455_50036 1353 28.19 Mlig455_063714

Neo: -

Age: logFC(26M/2M)=-0.294

Region-enriched R4: 1.826/0.00071
Region-enriched R3: 1.745/0.00078
Region-enriched R5: 1.202/0.01353

SPHK1 0.951 - - - - 0.951 - Mlig455_063714 {REF} {Length: 3647} {TRANSSPLICED} {Pfam: Diacylglycerol kinase catalytic domain [PF00781.26, score=81.8]} {Human: ENSG00000176170, SPHK1, sphingosine kinase 1, [Score=152, Expect=4e-43]} {Mouse: ENSMUSG00000061878, Sphk1, sphingosine kinase 1, [RH, Score=150, Expect=5e-44]; ENSMUSG00000057342, Sphk2, sphingosine kinase 2, [RH, Score=145, Expect=2e-39]} {Dmel: FBgn0030300, Sk1, Sphingosine kinase 1, [RH, Score=145, Expect=1e-39]} {Celegans: WBGene00007918, sphk-1, Sphingosine kinase 1, [Score=120, Expect=2e-31]} {Smed: dd_Smed_v6_5736_0_1, dd_Smed_v6_5736_0_1, [Score=127, Expect=3e-34]} {RNA1509_19326} {RNA1310_4471} {RNA815_1161}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA