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Results for MligTC455_29368

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_29368 49 1.02 Mlig455_064310

Neo: -

Age: Up-Down-Up

NR2C2 Mlig455_064310 {REF} {Length: 4659} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=101.5]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=44.5]} {Human: ENSG00000177463, NR2C2, nuclear receptor subfamily 2 group C member 2, [RH, Score=142, Expect=1e-35]} {Mouse: ENSMUSG00000019803, Nr2e1, nuclear receptor subfamily 2, group E, member 1, [Score=149, Expect=1e-39]; ENSMUSG00000015843, Rxrg, retinoid X receptor gamma, [Score=144, Expect=4e-37]; ENSMUSG00000015846, Rxra, retinoid X receptor alpha, [Score=144, Expect=3e-37]} {Dmel: FBgn0003651, svp, seven up, [Score=139, Expect=4e-35]} {Celegans: WBGene00022423, nhr-41, Nuclear hormone receptor family member nhr-41, [Score=177, Expect=2e-49]} {Smed: dd_Smed_v6_9123_0_1, dd_Smed_v6_9123_0_1, [Score=180, Expect=2e-50]} {RNA1509_26020} {RNA1310_11731.1} {RNA815_25095}

Cumulative graph for MligTC455_29368

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.797 1.266 0.39718 1.00000
RegionR2 2.488 1.266 0.13889 0.46311
RegionR3 2.369 1.266 0.02884 0.29089
RegionR4 -1.827 1.266 0.99905 1.00000
RegionR5 -0.468 1.266 0.94176 1.00000
RegionR6 0.776 1.266 0.54666 1.00000
RegionR7 -1.977 1.266 0.99986 1.00000
RegionR8 3.435 1.266 0.04396 0.41078

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 3.555 1.266 0.99973 1.00000
RegenerationR2 3.024 1.266 0.00164 0.06229
RegenerationR3 2.835 1.266 0.00618 0.14210
RegenerationR4 3.956 1.266 0.00282 0.06934
RegenerationR5 3.342 1.266 0.00159 0.06918
RegenerationR6 2.788 1.266 0.04617 0.26815
RegenerationBL 1.318 1.266 0.59697 0.94494
RegenerationTP 3.914 1.266 0.02094 0.24766


Genes with expression patterns similar to MligTC455_29368

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_29368 49 1.02 Mlig455_064310

Neo: -

Age: Up-Down-Up

NR2C2 2 - - - - 1.000 1.000 Mlig455_064310 {REF} {Length: 4659} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=101.5]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=44.5]} {Human: ENSG00000177463, NR2C2, nuclear receptor subfamily 2 group C member 2, [RH, Score=142, Expect=1e-35]} {Mouse: ENSMUSG00000019803, Nr2e1, nuclear receptor subfamily 2, group E, member 1, [Score=149, Expect=1e-39]; ENSMUSG00000015843, Rxrg, retinoid X receptor gamma, [Score=144, Expect=4e-37]; ENSMUSG00000015846, Rxra, retinoid X receptor alpha, [Score=144, Expect=3e-37]} {Dmel: FBgn0003651, svp, seven up, [Score=139, Expect=4e-35]} {Celegans: WBGene00022423, nhr-41, Nuclear hormone receptor family member nhr-41, [Score=177, Expect=2e-49]} {Smed: dd_Smed_v6_9123_0_1, dd_Smed_v6_9123_0_1, [Score=180, Expect=2e-50]} {RNA1509_26020} {RNA1310_11731.1} {RNA815_25095}
2. MligTC455_17809 89 1.85 Mlig455_066801, Mlig455_066865

Neo: -

Age: -

0.97 - - - - - 0.970

Mlig455_066801 {REF} {Length: 1886} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=41.4]} {Smed: dd_Smed_v6_54490_0_1, dd_Smed_v6_54490_0_1, [Score=46.2, Expect=3e-06]} {RNA1310_22785} {RNA815_13697}

Mlig455_066865 {REF} {Length: 1886} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=41.2]} {Smed: dd_Smed_v6_54490_0_1, dd_Smed_v6_54490_0_1, [Score=46.6, Expect=3e-06]} {RNA1310_22785} {RNA815_13697}
3. MligTC455_23215 289 6.03 Mlig455_058934

Neo: -

Age: -

Region-enriched R4: 1.935/0.04312

HEXA 0.97 - - - - - 0.970 Mlig455_058934 {REF} {Length: 4161} {TRANSSPLICED} {Pfam: Glycosyl hydrolase family 20, catalytic domain [PF00728.24, score=249.1]; Putative carbohydrate binding domain [PF03173.15, score=52.9]} {Human: ENSG00000213614, HEXA, hexosaminidase subunit alpha, [Score=81.3, Expect=4e-15]} {Mouse: ENSMUSG00000025232, Hexa, hexosaminidase A, [Score=82.0, Expect=2e-15]} {Dmel: FBgn0041629, Hexo2, Hexosaminidase 2, [Score=77.8, Expect=2e-14]} {Celegans: WBGene00020509, hex-1, Beta-hexosaminidase A, [Score=63.9, Expect=4e-10]} {Smed: dd_Smed_v6_3964_0_2, dd_Smed_v6_3964_0_2, [Score=105, Expect=5e-23]} {RNA1509_42952} {RNA1310_2171, RNA1509_42952} {RNA1509_42952, RNA815_1707.1}
4. MligTC455_24094 881 18.35 Mlig455_013384

Neo: -

Age: logFC(26M/2M)=-0.379

FAT4 0.97 - - - - - 0.970 Mlig455_013384 {REF} {Length: 10082} {Pfam: Cadherin domain [PF00028.19, score=873.7]; Cadherin-like [PF16184.7, score=117.8]; Cadherin-like [PF08266.14, score=37.7]} {Human: ENSG00000196159, FAT4, FAT atypical cadherin 4, [Score=614, Expect=3e-176]} {Mouse: ENSMUSG00000046743, Fat4, FAT atypical cadherin 4, [Score=610, Expect=3e-175]} {Dmel: FBgn0001075, ft, fat, [Score=483, Expect=2e-136]} {Celegans: WBGene00000396, cdh-4, Cadherin-4, [Score=265, Expect=3e-70]} {Smed: dd_Smed_v6_7638_0_1, dd_Smed_v6_7638_0_1, [Score=296, Expect=8e-80]} {RNA1509_18808, RNA1509_37372, RNA1509_41735, RNA1509_43667} {RNA1310_91.1, RNA1509_37372, RNA1509_41735, RNA1509_43667} {RNA1509_37372, RNA1509_41735, RNA1509_43667, RNA815_45.1}
5. MligTC455_33293 190 3.95 Mlig455_039617, Mlig455_051433

Neo: -

Age: logFC(26M/2M)=-0.344

CERKL 0.968 - - - - - 0.968

Mlig455_039617 {REF} {Length: 1308} {RNA1509_27178} {RNA1310_5866.1} {RNA815_1765}

Mlig455_051433 {REF} {Length: 4899} {TRANSSPLICED} {Pfam: Diacylglycerol kinase catalytic domain [PF00781.26, score=53.4]; Ceramide kinase C-terminal domain [PF19280.1, score=36.3]} {Human: ENSG00000188452, CERKL, ceramide kinase like, [Score=109, Expect=3e-24]} {Mouse: ENSMUSG00000075256, Cerkl, ceramide kinase-like, [Score=96.7, Expect=2e-20]} {Dmel: FBgn0037315, Cerk, Ceramide kinase, [Score=97.4, Expect=2e-20]} {Smed: dd_Smed_v6_9323_0_1, dd_Smed_v6_9323_0_1, [Score=120, Expect=2e-28]} {RNA1509_12345, RNA1509_27178} {RNA1310_5866.1, RNA1509_12345, RNA1509_27178} {RNA1509_12345, RNA1509_27178, RNA815_1765}
6. MligTC455_23216 287 5.98 Mlig455_058939

Neo: -

Age: -

Region-enriched R4: 2.172/0.02122

HEXA 0.967 - - - - - 0.967 Mlig455_058939 {REF} {Length: 3816} {TRANSSPLICED} {Pfam: Glycosyl hydrolase family 20, catalytic domain [PF00728.24, score=247.3]; Putative carbohydrate binding domain [PF03173.15, score=27.3]} {Human: ENSG00000213614, HEXA, hexosaminidase subunit alpha, [Score=77.4, Expect=5e-14]} {Mouse: ENSMUSG00000025232, Hexa, hexosaminidase A, [Score=79.3, Expect=9e-15]} {Dmel: FBgn0041629, Hexo2, Hexosaminidase 2, [Score=77.0, Expect=4e-14]} {Celegans: WBGene00020509, hex-1, Beta-hexosaminidase A, [Score=64.3, Expect=3e-10]} {Smed: dd_Smed_v6_3964_0_2, dd_Smed_v6_3964_0_2, [Score=103, Expect=2e-22]} {RNA1509_42952} {RNA1310_2171} {RNA815_1707.1}
7. MligTC455_29762 62 1.29 Mlig455_061431

Neo: -

Age: logFC(26M/2M)=0.670

BEST1 0.966 - - - - - 0.966 Mlig455_061431 {REF} {Length: 4616} {Pfam: Bestrophin, RFP-TM, chloride channel [PF01062.23, score=182.0]} {Human: ENSG00000167995, BEST1, bestrophin 1, [Score=124, Expect=1e-29]; ENSG00000142959, BEST4, bestrophin 4, [Score=124, Expect=3e-30]; ENSG00000127325, BEST3, bestrophin 3, [Score=119, Expect=1e-27]} {Mouse: ENSMUSG00000037418, Best1, bestrophin 1, [Score=143, Expect=2e-36]} {Dmel: FBgn0040238, Best1, Bestrophin 1, [Score=227, Expect=7e-66]} {Celegans: WBGene00015288, best-4, Bestrophin homolog, [Score=172, Expect=6e-47]} {Smed: dd_Smed_v6_8073_0_1, dd_Smed_v6_8073_0_1, [Score=354, Expect=2e-117]} {RNA1509_54677} {RNA1310_17634, RNA1509_54677} {RNA1509_54677, RNA815_11997}
8. MligTC455_53853 563 11.74 Mlig455_016298

Neo: -

Age: logFC(26M/2M)=-0.225

KIDINS220 0.959 - - - - - 0.959 Mlig455_016298 {REF} {Length: 5886} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=173.0]; Ankyrin repeats (many copies) [PF13857.8, score=78.1]; Ankyrin repeats (many copies) [PF13637.8, score=76.0]; Ankyrin repeat [PF13606.8, score=68.2]; Ankyrin repeat [PF00023.32, score=60.7]; Caspase domain [PF00656.24, score=55.9]; Mab-21 protein [PF03281.16, score=40.6]} {Human: ENSG00000134313, KIDINS220, kinase D interacting substrate 220, [Score=85.1, Expect=9e-16]} {Mouse: ENSMUSG00000036333, Kidins220, kinase D-interacting substrate 220, [Score=84.7, Expect=8e-16]} {Dmel: FBgn0039590, CG10011, [Score=74.7, Expect=6e-13]} {Celegans: WBGene00006490, kdin-1, KiDINs220 (Vertebrate scaffold protein) homolog, [Score=81.6, Expect=3e-15]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=68.9, Expect=2e-11]} {RNA1509_59871, RNA1509_7214} {RNA1310_1541, RNA1509_59871, RNA1509_7214} {RNA1509_59871, RNA1509_7214, RNA815_372}
9. MligTC455_46625 361 7.52 Mlig455_031223

Neo: -

Age: logFC(26M/2M)=-0.400

TTLL8 0.958 - - - - - 0.958 Mlig455_031223 {REF} {Length: 2848} {TRANSSPLICED} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=242.8]} {Human: ENSG00000138892, TTLL8, tubulin tyrosine ligase like 8, [RH, Score=456, Expect=5e-148]; ENSG00000214021, TTLL3, tubulin tyrosine ligase like 3, [RH, Score=449, Expect=1e-149]} {Mouse: ENSMUSG00000022388, Ttll8, tubulin tyrosine ligase-like family, member 8, [RH, Score=476, Expect=3e-156]} {Dmel: FBgn0031854, TTLL3A, Tubulin tyrosine ligase-like 3A, [RH, Score=370, Expect=2e-114]} {Celegans: WBGene00044187, ttll-9, Tubulin Tyrosine Ligase Like, [Score=107, Expect=1e-24]} {Smed: dd_Smed_v6_10244_0_2, dd_Smed_v6_10244_0_2, [Score=533, Expect=8e-177]} {RNA1509_44299} {RNA1310_8425} {RNA815_14216}
10. MligTC455_47002 25 0.53 Mlig455_054968

Neo: -

Age: logFC(26M/2M)=0.489

Region-enriched R4: 7.313/0.01920

RPL4 0.956 - - - - - 0.956 Mlig455_054968 {REF} {Length: 1332} {TRANSSPLICED} {Pfam: Ribosomal protein L4/L1 family [PF00573.24, score=141.4]; 60S ribosomal protein L4 C-terminal domain [PF14374.8, score=78.8]} {Human: ENSG00000174444, RPL4, ribosomal protein L4, [RH, Score=437, Expect=2e-152]} {Mouse: ENSMUSG00000032399, Rpl4, ribosomal protein L4, [RH, Score=437, Expect=7e-153]} {Dmel: FBgn0003279, RpL4, Ribosomal protein L4, [RH, Score=422, Expect=2e-147]} {Celegans: WBGene00004415, rpl-4, 60S ribosomal protein L4, [RH, Score=395, Expect=2e-137]} {Smed: dd_Smed_v6_211_0_1, dd_Smed_v6_211_0_1, [RH, Score=391, Expect=6e-136]} {RNA1509_548, RNA1509_58918} {RNA1310_26790, RNA1509_58918} {RNA1509_58918, RNA815_10660}
11. MligTC455_37384 166 3.47 Mlig455_030537

Neo: -

Age: Down-Up-Up

APCDD1 0.954 - - - - - 0.954 Mlig455_030537 {REF} {Length: 1885} {Pfam: Adenomatosis polyposis coli down-regulated 1 [PF14921.8, score=207.7]} {Human: ENSG00000154856, APCDD1, APC down-regulated 1, [RH, Score=232, Expect=8e-69]} {Mouse: ENSMUSG00000071847, Apcdd1, adenomatosis polyposis coli down-regulated 1, [RH, Score=228, Expect=2e-67]} {RNA1509_38294} {RNA1310_16871} {RNA815_39513}
12. MligTC455_48786 2725 56.78 Mlig455_048422, Mlig455_048564

Neo: -

Age: Down-Up-Up

Region-enriched R7: 1.086/0.03239

0.954 - - - - - 0.954

Mlig455_048422 {REF} {Length: 1894} {Pfam: Seven in absentia protein family [PF03145.18, score=25.4]} {RNA1509_15747} {RNA1310_15112.1} {RNA815_6351.1}

Mlig455_048564 {REF} {Length: 1894} {Pfam: Seven in absentia protein family [PF03145.18, score=25.4]} {RNA1509_15747, RNA1509_33964, RNA1509_59414} {RNA1310_15112.1, RNA1509_15747, RNA1509_33964, RNA1509_59414} {RNA1509_15747, RNA1509_33964, RNA1509_59414, RNA815_6351.1}
13. MligTC455_36629 279 5.81 Mlig455_069684

Neo: -

Age: Down-Up-Up

Region-enriched R2: 2.721/0.01447
Region-enriched R4: 2.304/0.01147

0.953 - - - - - 0.953 Mlig455_069684 {REF} {Length: 2407} {Smed: dd_Smed_v6_2397_0_1, dd_Smed_v6_2397_0_1, [RH, Score=438, Expect=4e-148]} {RNA1509_46354} {RNA1310_10207, RNA1509_46354} {RNA1509_46354, RNA815_3595}
14. MligTC455_45878 89 1.85 Mlig455_067741

Neo: -

Age: Up-Down-Up

ABCC10 0.953 - - - - 0.953 - Mlig455_067741 {REF} {Length: 6863} {TRANSSPLICED} {Pfam: ABC transporter transmembrane region [PF00664.25, score=209.5]; ABC transporter [PF00005.29, score=175.7]; RecF/RecN/SMC N terminal domain [PF02463.21, score=42.5]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=29.9]; AAA ATPase domain [PF13191.8, score=27.2]; P-loop containing region of AAA domain [PF13555.8, score=26.0]; AAA domain [PF13401.8, score=23.9]; RsgA GTPase [PF03193.18, score=23.8]; AAA domain [PF13476.8, score=23.3]; 50S ribosome-binding GTPase [PF01926.25, score=21.9]; Double-GTPase 2 [PF19993.1, score=19.6]} {Human: ENSG00000124574, ABCC10, ATP binding cassette subfamily C member 10, [Score=786, Expect=0.0]} {Mouse: ENSMUSG00000023088, Abcc1, ATP-binding cassette, sub-family C (CFTR/MRP), member 1, [Score=709, Expect=0.0]; ENSMUSG00000020865, Abcc3, ATP-binding cassette, sub-family C (CFTR/MRP), member 3, [Score=706, Expect=0.0]; ENSMUSG00000025194, Abcc2, ATP-binding cassette, sub-family C (CFTR/MRP), member 2, [Score=683, Expect=0.0]} {Dmel: FBgn0032456, MRP, Multidrug-Resistance like Protein 1, [Score=707, Expect=0.0]} {Celegans: WBGene00003407, mrp-1, Multidrug resistance-associated protein, [Score=657, Expect=0.0]} {Smed: dd_Smed_v6_3982_0_1, dd_Smed_v6_3982_0_1, [Score=691, Expect=0.0]} {RNA1509_16356} {RNA1310_1136.1} {RNA815_24256}
15. MligTC455_14446 614 12.78 Mlig455_033034

Neo: -

Age: Down-Up-Down

0.952 - - - - - 0.952 Mlig455_033034 {REF} {Length: 558} {Pfam: Domain of unknown function (DUF4513) [PF14983.8, score=43.1]} {Smed: dd_Smed_v6_9820_0_1, dd_Smed_v6_9820_0_1, [RH, Score=93.6, Expect=5e-26]} {RNA1509_30396} {RNA1310_35608} {RNA815_26600}
16. MligTC455_21814 1163 24.22 Mlig455_031606

Neo: -

Age: -

QRICH2 0.952 - - - - - 0.952 Mlig455_031606 {REF} {Length: 4448} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4795) [PF16043.7, score=161.4]} {Human: ENSG00000129646, QRICH2, glutamine rich 2, [Score=157, Expect=8e-39]} {Mouse: ENSMUSG00000070331, Qrich2, glutamine rich 2, [RH, Score=159, Expect=9e-41]} {Dmel: FBgn0031347, CG10869, [RH, Score=67.4, Expect=3e-11]} {Smed: dd_Smed_v6_6048_0_3, dd_Smed_v6_6048_0_3, [RH, Score=553, Expect=0.0]} {RNA1509_27286, RNA1509_34856, RNA1509_3542, RNA1509_40020, RNA1509_44586, RNA1509_56250, RNA1509_56910} {RNA1310_3031.1, RNA1509_27286, RNA1509_34856, RNA1509_3542, RNA1509_40020, RNA1509_44586, RNA1509_56250, RNA1509_56910} {RNA1509_27286, RNA1509_34856, RNA1509_3542, RNA1509_40020, RNA1509_44586, RNA1509_56250, RNA1509_56910, RNA815_1272.1}
17. MligTC455_25530 1042 21.71 Mlig455_035413

Neo: -

Age: logFC(26M/2M)=0.450

LHFPL3 0.952 - - - - - 0.952 Mlig455_035413 {REF} {Length: 1696} {TRANSSPLICED} {Pfam: Lipoma HMGIC fusion partner-like protein [PF10242.11, score=156.0]; PMP-22/EMP/MP20/Claudin family [PF00822.22, score=20.9]} {Human: ENSG00000187416, LHFPL3, LHFPL tetraspan subfamily member 3, [RH, Score=181, Expect=4e-56]; ENSG00000156959, LHFPL4, LHFPL tetraspan subfamily member 4, [RH, Score=176, Expect=6e-54]} {Mouse: ENSMUSG00000106379, Lhfpl3, lipoma HMGIC fusion partner-like 3, [RH, Score=181, Expect=2e-56]; ENSMUSG00000042873, Lhfpl4, lipoma HMGIC fusion partner-like protein 4, [RH, Score=177, Expect=3e-54]} {Dmel: FBgn0262624, Tmhs, Tetraspan membrane protein in hair cell stereocilia, [RH, Score=147, Expect=8e-43]} {RNA1509_37681, RNA1509_43915, RNA1509_4945, RNA1509_53655} {RNA1310_17914, RNA1509_37681, RNA1509_43915, RNA1509_53655} {RNA1509_37681, RNA1509_43915, RNA1509_53655, RNA815_7326.1}
18. MligTC455_22568 756 15.74 Mlig455_006710

Neo: -

Age: Up-Down-Down

TRPM3 0.951 - - - - - 0.951 Mlig455_006710 {REF} {Length: 6137} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=107.2]; Ankyrin repeats (3 copies) [PF12796.9, score=92.9]; Ankyrin repeat [PF00023.32, score=63.3]; Ankyrin repeats (many copies) [PF13857.8, score=59.6]; Ankyrin repeat [PF13606.8, score=58.2]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=111, Expect=7e-24]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=111, Expect=5e-24]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=105, Expect=3e-22]} {Celegans: WBGene00001796, gtl-2, Gon-Two Like (TRP subfamily), [Score=64.3, Expect=6e-10]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=120, Expect=3e-27]} {RNA1509_12598} {RNA1310_943.1} {RNA815_2516.1}
19. MligTC455_17598 654 13.62 Mlig455_007290

Neo: -

Age: Down-Down-Up

0.95 - - - - - 0.950 Mlig455_007290 {REF} {Length: 1018} {RNA1509_58239, RNA1509_59430} {RNA1310_38081.1, RNA1509_58239, RNA1509_59430} {RNA1509_58239, RNA1509_59430, RNA815_31002.2}

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