TomoSeq data search

Data search

Results for MligTC455_29386

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_29386

92

1.92

Mlig455_016967, Mlig455_049900, Mlig455_067854

Neo: -

Age: logFC(26M/2M)=-0.389

Region-enriched R7: 3.496/0.02360

ARMH3

Mlig455_016967 {REF} {Length: 886} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_38155} {RNA1310_16376} {RNA815_12881}

Mlig455_049900 {REF} {Length: 1258} {TRANSSPLICED} {Human: ENSG00000120029, ARMH3, armadillo-like helical domain containing 3, [Score=90.9, Expect=2e-19]} {Mouse: ENSMUSG00000039901, Armh3, armadillo-like helical domain containing 3, [Score=90.1, Expect=3e-19]} {Dmel: FBgn0037638, CG8379, [Score=69.7, Expect=8e-13]} {Smed: dd_Smed_v6_8884_0_1, dd_Smed_v6_8884_0_1, [Score=90.9, Expect=5e-20]} {RNA1509_8076} {RNA1310_8739.1} {RNA815_43343}

Mlig455_067854 {REF} {Length: 551} {RNA1509_38155} {RNA1310_16376} {RNA815_49181}

Cumulative graph for MligTC455_29386

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.696	1.752	0.34140	0.98595
RegionR2	2.774	1.752	0.03659	0.22096
RegionR3	-0.922	1.752	0.43253	0.95162
RegionR4	-1.458	1.752	0.21617	0.50318
RegionR5	-1.967	1.752	0.09802	0.30100
RegionR6	-0.952	1.752	0.41380	0.98224
RegionR7	3.496	1.752	0.00060	0.02360
RegionR8	1.724	1.752	0.33991	0.97393

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.664	1.752	0.90832	1.00000
RegenerationR2	-1.183	1.752	0.23729	0.68527
RegenerationR3	1.183	1.752	0.38699	0.79403
RegenerationR4	-0.392	1.752	0.73205	0.96491
RegenerationR5	1.556	1.752	0.17765	0.60676
RegenerationR6	0.007	1.752	0.96673	1.00000
RegenerationBL	-6.1	1.752	0.02395	0.16997
RegenerationTP	-1.383	1.752	0.33527	0.77956

Genes with expression patterns similar to MligTC455_29386

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_29386	92	1.92	Mlig455_016967, Mlig455_049900, Mlig455_067854	Neo: - Age: logFC(26M/2M)=-0.389 Region-enriched R7: 3.496/0.02360	ARMH3	4	1.000	-	1.000	-	1.000	1.000	Mlig455_016967 {REF} {Length: 886} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_38155} {RNA1310_16376} {RNA815_12881} Mlig455_049900 {REF} {Length: 1258} {TRANSSPLICED} {Human: ENSG00000120029, ARMH3, armadillo-like helical domain containing 3, [Score=90.9, Expect=2e-19]} {Mouse: ENSMUSG00000039901, Armh3, armadillo-like helical domain containing 3, [Score=90.1, Expect=3e-19]} {Dmel: FBgn0037638, CG8379, [Score=69.7, Expect=8e-13]} {Smed: dd_Smed_v6_8884_0_1, dd_Smed_v6_8884_0_1, [Score=90.9, Expect=5e-20]} {RNA1509_8076} {RNA1310_8739.1} {RNA815_43343} Mlig455_067854 {REF} {Length: 551} {RNA1509_38155} {RNA1310_16376} {RNA815_49181}
2.	MligTC455_29385	198	4.12	Mlig455_024380, Mlig455_027282, Mlig455_068042	Neo: - Age: - Region-enriched R7: 2.827/0.03974		2.898	0.937	-	0.988	-	0.973	-	Mlig455_024380 {REF} {Length: 317} {NoTransDecoderORF} {RNA1509_38155} {RNA1310_23095} {RNA815_49181} Mlig455_027282 {REF} {Length: 499} {NoTransDecoderORF} {RNA1509_38155} {RNA1310_16376} {RNA815_49181} Mlig455_068042 {REF} {Length: 3201} {RNA1509_38155} {RNA1310_16376} {RNA815_12881}
3.	MligTC455_32968	183	3.8	Mlig455_005796, Mlig455_030716, Mlig455_044029, Mlig455_057389, Mlig455_068075	Neo: - Age: -		2.672	-	-	0.984	-	0.825	0.863	Mlig455_005796 {REF} {Length: 345} {NoTransDecoderORF} {RNA1509_38155} {RNA1310_16376} {RNA815_49181} Mlig455_030716 {REF} {Length: 605} {RNA1509_16424} {RNA1310_36978} {RNA815_16657.1} Mlig455_044029 {REF} {Length: 760} {NoTransDecoderORF} {RNA1509_38155} {RNA1310_16376} {RNA815_49181} Mlig455_057389 {REF} {Length: 464} {NoTransDecoderORF} {RNA1509_38155} {RNA1310_16376} {RNA815_49181} Mlig455_068075 {REF} {Length: 2006} {RNA1509_16424} {RNA1310_309.1} {RNA815_16657.1}
4.	MligTC455_36864	67	1.39	Mlig455_009537, Mlig455_027597, Mlig455_046197	Neo: - Age: - Region-enriched R7: 5.893/0.00033 Region-enriched R2: 5.118/0.01168		1.833	0.881	-	-	-	0.952	-	Mlig455_009537 {REF} {Length: 871} {NoTransDecoderORF} {RNA1509_57004} {RNA1310_15891} {RNA815_15623} Mlig455_027597 {REF} {Length: 342} {NoTransDecoderORF} {RNA1509_39384} {RNA1310_4959} {RNA815_52971} Mlig455_046197 {REF} {Length: 1638} {NoTransDecoderORF} {RNA1509_35798, RNA1509_57004} {RNA1310_15891, RNA1509_35798} {RNA1509_35798, RNA815_15623}
5.	MligTC455_17268	384	8.01	Mlig455_025158, Mlig455_063919, Mlig455_063936	Neo: - Age: logFC(26M/2M)=-0.563		0.971	-	-	-	-	0.971	-	Mlig455_025158 {REF} {Length: 2507} {RNA1509_18014} {RNA1310_14352.1} {RNA815_3941} Mlig455_063919 {REF} {Length: 2574} {RNA1509_18014} {RNA1310_14352.1} {RNA815_3941} Mlig455_063936 {REF} {Length: 2565} {RNA1509_18014} {RNA1310_14352.1} {RNA815_3941}
6.	MligTC455_29384	42	0.86	Mlig455_061435	Neo: - Age: -		0.967	-	-	0.967	-	-	-	Mlig455_061435 {REF} {Length: 998} {RNA1509_6226} {RNA1310_87.2} {RNA815_7655.1}
7.	MligTC455_36513	37	0.78	Mlig455_060829	Neo: - Age: -	ANKHD1	0.957	-	-	-	-	0.957	-	Mlig455_060829 {REF} {Length: 3498} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=95.2]; Ankyrin repeats (many copies) [PF13857.8, score=73.1]; Ankyrin repeats (many copies) [PF13637.8, score=55.4]; Ankyrin repeat [PF00023.32, score=41.9]; Ankyrin repeat [PF13606.8, score=40.1]} {Human: ENSG00000131503, ANKHD1, ankyrin repeat and KH domain containing 1, [Score=73.9, Expect=4e-13]; ENSG00000254996, ANKHD1-EIF4EBP3, ANKHD1-EIF4EBP3 readthrough, [Score=73.2, Expect=1e-12]; ENSG00000134313, KIDINS220, kinase D interacting substrate 220, [Score=72.4, Expect=2e-12]; ENSG00000139645, ANKRD52, ankyrin repeat domain 52, [Score=71.6, Expect=3e-12]; ENSG00000065413, ANKRD44, ankyrin repeat domain 44, [Score=71.2, Expect=3e-12]} {Mouse: ENSMUSG00000036333, Kidins220, kinase D-interacting substrate 220, [Score=73.6, Expect=6e-13]; ENSMUSG00000024483, Ankhd1, ankyrin repeat and KH domain containing 1, [Score=73.6, Expect=6e-13]; ENSMUSG00000014498, Ankrd52, ankyrin repeat domain 52, [Score=72.0, Expect=2e-12]; ENSMUSG00000052331, Ankrd44, ankyrin repeat domain 44, [Score=70.1, Expect=6e-12]} {Dmel: FBgn0261554, CG42672, [Score=72.4, Expect=8e-13]} {Celegans: WBGene00006490, kdin-1, KiDINs220 (Vertebrate scaffold protein) homolog, [Score=69.3, Expect=6e-12]} {Smed: dd_Smed_v6_21003_0_1, dd_Smed_v6_21003_0_1, [Score=65.5, Expect=7e-11]} {RNA1509_22959} {RNA1310_9158} {RNA815_1335}
8.	MligTC455_11319	34	0.7	Mlig455_054806	Neo: - Age: -		0.954	-	-	-	-	0.954	-	Mlig455_054806 {REF} {Length: 275} {NoTransDecoderORF}
9.	MligTC455_44200	2039	42.48	Mlig455_028060, Mlig455_028122	Neo: - Age: logFC(26M/2M)=0.639 Region-enriched R4: 2.505/0.00026 Regeneration-depleted BL: -4.310 Regeneration-depleted R6: -2.510		0.954	-	-	-	-	0.954	-	Mlig455_028060 {REF} {Length: 1210} {RNA1509_16945, RNA1509_36375, RNA1509_37005, RNA1509_42816, RNA1509_42956, RNA1509_56773} {RNA1310_33727, RNA1509_16945, RNA1509_36375, RNA1509_37005, RNA1509_42816, RNA1509_42956, RNA1509_56773} {RNA1509_16945, RNA1509_36375, RNA1509_37005, RNA1509_42816, RNA1509_42956, RNA1509_56773, RNA815_13932} Mlig455_028122 {REF} {Length: 1116} {RNA1509_42816} {RNA1310_33727} {RNA815_13932}
10.	MligTC455_39886	130	2.71	Mlig455_018360	Neo: - Age: - Region-enriched R2: 4.560/0.00239		0.951	-	-	-	-	0.951	-	Mlig455_018360 {REF} {Length: 2293} {Pfam: NAD dependent epimerase/dehydratase family [PF01370.23, score=79.2]; GDP-mannose 4,6 dehydratase [PF16363.7, score=55.7]; RmlD substrate binding domain [PF04321.19, score=35.8]; Male sterility protein [PF07993.14, score=33.5]; 3-beta hydroxysteroid dehydrogenase/isomerase family [PF01073.21, score=25.1]; Polysaccharide biosynthesis protein [PF02719.17, score=21.6]} {Mouse: ENSMUSG00000021953, Tdh, L-threonine dehydrogenase, [RH, Score=414, Expect=1e-143]} {Dmel: FBgn0036997, CG5955, [RH, Score=444, Expect=5e-156]} {Celegans: WBGene00017262, F08F3.4, [RH, Score=340, Expect=3e-115]} {Smed: dd_Smed_v6_12075_0_1, dd_Smed_v6_12075_0_1, [RH, Score=444, Expect=7e-157]} {RNA1509_44687} {RNA1310_15323} {RNA815_7207.1}
11.	MligTC455_12804	44	0.92	Mlig455_049628	Neo: - Age: -		0.95	-	-	-	-	0.950	-	Mlig455_049628 {REF} {Length: 1589} {NoTransDecoderORF} {RNA1509_4484} {RNA1310_68827} {RNA815_4833.2}
12.	MligTC455_43365	157	3.27	Mlig455_019023	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.352	TNN	0.95	-	-	-	-	0.950	-	Mlig455_019023 {REF} {Length: 2388} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=106.4]} {Human: ENSG00000120332, TNN, tenascin N, [Score=92.4, Expect=2e-20]; ENSG00000229353, TNXB, tenascin XB, [Score=91.3, Expect=7e-20]; ENSG00000166482, MFAP4, microfibril associated protein 4, [Score=91.3, Expect=5e-21]; ENSG00000236236, TNXB, tenascin XB, [Score=90.5, Expect=1e-19]; ENSG00000206258, TNXB, tenascin XB, [Score=90.5, Expect=1e-19]; ENSG00000233323, TNXB, tenascin XB, [Score=90.5, Expect=1e-19]; ENSG00000231608, TNXB, tenascin XB, [Score=90.5, Expect=1e-19]; ENSG00000168477, TNXB, tenascin XB, [Score=90.5, Expect=1e-19]; ENSG00000171819, ANGPTL7, angiopoietin like 7, [Score=88.6, Expect=1e-19]} {Mouse: ENSMUSG00000026725, Tnn, tenascin N, [Score=92.0, Expect=2e-20]; ENSMUSG00000033327, Tnxb, tenascin XB, [Score=91.3, Expect=4e-20]; ENSMUSG00000042436, Mfap4, microfibrillar-associated protein 4, [Score=88.6, Expect=2e-20]} {Dmel: FBgn0003326, sca, scabrous, [Score=85.5, Expect=2e-18]} {Celegans: WBGene00020516, T15B7.1, [Score=52.8, Expect=1e-07]} {Smed: dd_Smed_v6_74244_0_1, dd_Smed_v6_74244_0_1, [Score=43.5, Expect=1e-05]} {RNA1509_25852} {RNA1310_16471.3, RNA1509_25852} {RNA1509_25852, RNA815_7229.1}

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