TomoSeq data search

Data search

Results for MligTC455_29401

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_29401

496

10.32

Mlig455_010068, Mlig455_063278

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.395

PSD2, PSD3

Mlig455_010068 {REF} {Length: 6587} {Pfam: Sec7 domain [PF01369.22, score=95.9]; Pleckstrin homology domain [PF15410.8, score=93.3]; PH domain [PF00169.31, score=40.4]} {Human: ENSG00000156011, PSD3, pleckstrin and Sec7 domain containing 3, [Score=229, Expect=7e-64]; ENSG00000146005, PSD2, pleckstrin and Sec7 domain containing 2, [Score=224, Expect=2e-63]} {Mouse: ENSMUSG00000030465, Psd3, pleckstrin and Sec7 domain containing 3, [Score=228, Expect=6e-64]; ENSMUSG00000024347, Psd2, pleckstrin and Sec7 domain containing 2, [Score=228, Expect=8e-65]} {Dmel: FBgn0051158, Efa6, Exchange factor for Arf 6, [Score=293, Expect=5e-86]} {Celegans: WBGene00013223, efa-6, Exchange factor for Arf-6, [Score=209, Expect=2e-58]} {Smed: dd_Smed_v6_6267_0_1, dd_Smed_v6_6267_0_1, [Score=188, Expect=8e-51]} {RNA1509_21871, RNA1509_42489, RNA1509_52857} {RNA1310_9417, RNA1509_21871, RNA1509_52857} {RNA1509_21871, RNA1509_52857, RNA815_7053}

Mlig455_063278 {REF} {Length: 6046} {Pfam: Sec7 domain [PF01369.22, score=124.2]; Pleckstrin homology domain [PF15410.8, score=93.2]; PH domain [PF00169.31, score=40.2]} {Human: ENSG00000146005, PSD2, pleckstrin and Sec7 domain containing 2, [RH, Score=258, Expect=9e-76]} {Mouse: ENSMUSG00000030465, Psd3, pleckstrin and Sec7 domain containing 3, [Score=264, Expect=2e-76]; ENSMUSG00000024347, Psd2, pleckstrin and Sec7 domain containing 2, [Score=261, Expect=5e-77]} {Dmel: FBgn0051158, Efa6, Exchange factor for Arf 6, [RH, Score=325, Expect=5e-97]} {Celegans: WBGene00013223, efa-6, Exchange factor for Arf-6, [RH, Score=237, Expect=5e-68]} {Smed: dd_Smed_v6_9018_0_1, dd_Smed_v6_9018_0_1, [RH, Score=230, Expect=8e-65]} {RNA1509_13848, RNA1509_42489} {RNA1310_9417, RNA1509_13848} {RNA1509_13848, RNA815_7053}

Cumulative graph for MligTC455_29401

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.354	3.778	0.23188	0.87519
RegionR2	1.116	3.778	0.02898	0.19219
RegionR3	-0.252	3.778	0.53280	1.00000
RegionR4	-0.928	3.778	0.04384	0.17653
RegionR5	0.236	3.778	0.48468	0.84837
RegionR6	0.191	3.778	0.62924	1.00000
RegionR7	-0.07	3.778	0.90040	1.00000
RegionR8	1.061	3.778	0.06851	0.50295

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-5.064	3.778	0.34037	1.00000
RegenerationR2	0.379	3.778	0.32068	0.75880
RegenerationR3	1.005	3.778	0.03042	0.31224
RegenerationR4	0.814	3.778	0.07767	0.44291
RegenerationR5	0.585	3.778	0.13367	0.54174
RegenerationR6	0.9	3.778	0.04583	0.26738
RegenerationBL	1.255	3.778	0.01031	0.10269
RegenerationTP	-1.587	3.778	0.03940	0.33069

Genes with expression patterns similar to MligTC455_29401

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_29401	496	10.32	Mlig455_010068, Mlig455_063278	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.395	PSD2, PSD3	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_010068 {REF} {Length: 6587} {Pfam: Sec7 domain [PF01369.22, score=95.9]; Pleckstrin homology domain [PF15410.8, score=93.3]; PH domain [PF00169.31, score=40.4]} {Human: ENSG00000156011, PSD3, pleckstrin and Sec7 domain containing 3, [Score=229, Expect=7e-64]; ENSG00000146005, PSD2, pleckstrin and Sec7 domain containing 2, [Score=224, Expect=2e-63]} {Mouse: ENSMUSG00000030465, Psd3, pleckstrin and Sec7 domain containing 3, [Score=228, Expect=6e-64]; ENSMUSG00000024347, Psd2, pleckstrin and Sec7 domain containing 2, [Score=228, Expect=8e-65]} {Dmel: FBgn0051158, Efa6, Exchange factor for Arf 6, [Score=293, Expect=5e-86]} {Celegans: WBGene00013223, efa-6, Exchange factor for Arf-6, [Score=209, Expect=2e-58]} {Smed: dd_Smed_v6_6267_0_1, dd_Smed_v6_6267_0_1, [Score=188, Expect=8e-51]} {RNA1509_21871, RNA1509_42489, RNA1509_52857} {RNA1310_9417, RNA1509_21871, RNA1509_52857} {RNA1509_21871, RNA1509_52857, RNA815_7053} Mlig455_063278 {REF} {Length: 6046} {Pfam: Sec7 domain [PF01369.22, score=124.2]; Pleckstrin homology domain [PF15410.8, score=93.2]; PH domain [PF00169.31, score=40.2]} {Human: ENSG00000146005, PSD2, pleckstrin and Sec7 domain containing 2, [RH, Score=258, Expect=9e-76]} {Mouse: ENSMUSG00000030465, Psd3, pleckstrin and Sec7 domain containing 3, [Score=264, Expect=2e-76]; ENSMUSG00000024347, Psd2, pleckstrin and Sec7 domain containing 2, [Score=261, Expect=5e-77]} {Dmel: FBgn0051158, Efa6, Exchange factor for Arf 6, [RH, Score=325, Expect=5e-97]} {Celegans: WBGene00013223, efa-6, Exchange factor for Arf-6, [RH, Score=237, Expect=5e-68]} {Smed: dd_Smed_v6_9018_0_1, dd_Smed_v6_9018_0_1, [RH, Score=230, Expect=8e-65]} {RNA1509_13848, RNA1509_42489} {RNA1310_9417, RNA1509_13848} {RNA1509_13848, RNA815_7053}
2.	MligTC455_20804	455	9.47	Mlig455_043937, Mlig455_043950	Neo: - Age: -	SBF1, SBF2	1.681	-	-	-	0.731	-	0.950	Mlig455_043937 {REF} {Length: 7288} {Pfam: Myotubularin-like phosphatase domain [PF06602.16, score=244.1]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=32.5]; PH domain [PF00169.31, score=20.9]} {Human: ENSG00000100241, SBF1, SET binding factor 1, [Score=375, Expect=1e-106]} {Mouse: ENSMUSG00000036529, Sbf1, SET binding factor 1, [Score=374, Expect=2e-106]; ENSMUSG00000038371, Sbf2, SET binding factor 2, [Score=363, Expect=6e-103]} {Dmel: FBgn0025802, Sbf, SET domain binding factor, [Score=252, Expect=2e-67]} {Celegans: WBGene00003477, mtm-5, Myotubularin-related protein 5, [RH, Score=152, Expect=9e-37]} {Smed: dd_Smed_v6_7244_0_4, dd_Smed_v6_7244_0_4, [Score=261, Expect=2e-70]} {RNA1509_6301} {RNA1310_675.4} {RNA815_6056} Mlig455_043950 {REF} {Length: 8369} {Pfam: Myotubularin-like phosphatase domain [PF06602.16, score=244.2]; DENN (AEX-3) domain [PF02141.23, score=118.5]; Myotubularin protein [PF12335.10, score=91.3]; PH domain [PF00169.31, score=41.3]; uDENN domain [PF03456.20, score=35.5]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=30.1]; Pleckstrin homology domain [PF15413.8, score=22.0]} {Human: ENSG00000133812, SBF2, SET binding factor 2, [RH, Score=556, Expect=8e-164]; ENSG00000100241, SBF1, SET binding factor 1, [RH, Score=539, Expect=9e-158]} {Mouse: ENSMUSG00000038371, Sbf2, SET binding factor 2, [RH, Score=754, Expect=0.0]; ENSMUSG00000036529, Sbf1, SET binding factor 1, [RH, Score=732, Expect=0.0]} {Dmel: FBgn0025802, Sbf, SET domain binding factor, [RH, Score=546, Expect=4e-160]} {Celegans: WBGene00003477, mtm-5, Myotubularin-related protein 5, [RH, Score=147, Expect=5e-35]} {Smed: dd_Smed_v6_7244_0_1, dd_Smed_v6_7244_0_1, [RH, Score=472, Expect=1e-134]} {RNA1509_6301} {RNA1310_675.3} {RNA815_6056}
3.	MligTC455_11024	329	6.85	Mlig455_030694	Neo: - Age: Up-Down-Up	TENM3	1.677	-	-	-	0.960	-	0.717	Mlig455_030694 {REF} {Length: 9796} {Pfam: EGF-like domain [PF07974.15, score=51.8]; RHS Repeat [PF05593.16, score=30.3]; Domain of unknown function (DUF4595) with porin-like fold [PF15283.8, score=20.7]} {Human: ENSG00000218336, TENM3, teneurin transmembrane protein 3, [Score=724, Expect=0.0]; ENSG00000145934, TENM2, teneurin transmembrane protein 2, [Score=716, Expect=0.0]} {Mouse: ENSMUSG00000031561, Tenm3, teneurin transmembrane protein 3, [Score=731, Expect=0.0]; ENSMUSG00000049336, Tenm2, teneurin transmembrane protein 2, [Score=719, Expect=0.0]} {Dmel: FBgn0004449, Ten-m, Tenascin major, [Score=737, Expect=0.0]} {Celegans: WBGene00006498, ten-1, Teneurin-1, [RH, Score=452, Expect=6e-128]} {Smed: dd_Smed_v6_5439_0_2, dd_Smed_v6_5439_0_2, [Score=705, Expect=0.0]} {RNA1509_13046, RNA1509_5348} {RNA1310_237, RNA1509_13046, RNA1509_5348} {RNA1509_13046, RNA1509_5348, RNA815_8740}
4.	MligTC455_11023	332	6.92	Mlig455_030619	Neo: - Age: Up-Down-Down	TENM1	1.673	-	-	-	0.957	-	0.716	Mlig455_030619 {REF} {Length: 5278} {Pfam: RHS Repeat [PF05593.16, score=35.4]; GHH signature containing HNH/Endo VII superfamily nuclease toxin [PF15636.8, score=31.5]; RHS protein [PF03527.16, score=21.6]} {Human: ENSG00000009694, TENM1, teneurin transmembrane protein 1, [Score=112, Expect=2e-24]} {Mouse: ENSMUSG00000016150, Tenm1, teneurin transmembrane protein 1, [Score=114, Expect=5e-25]} {Dmel: FBgn0004449, Ten-m, Tenascin major, [Score=132, Expect=5e-31]} {RNA1509_49673, RNA1509_5348} {RNA1310_220.2, RNA1509_49673} {RNA1509_49673, RNA815_8740}
5.	MligTC455_52607	707	14.73	Mlig455_065500	Neo: - Age: Up-Up-Down	OSBPL10	0.967	-	-	-	-	-	0.967	Mlig455_065500 {REF} {Length: 3443} {TRANSSPLICED} {Pfam: Oxysterol-binding protein [PF01237.20, score=255.7]; PH domain [PF00169.31, score=39.2]; Pleckstrin homology domain [PF15409.8, score=35.5]} {Human: ENSG00000144645, OSBPL10, oxysterol binding protein like 10, [RH, Score=483, Expect=1e-159]} {Mouse: ENSMUSG00000040875, Osbpl10, oxysterol binding protein-like 10, [RH, Score=477, Expect=2e-157]} {Dmel: FBgn0033463, CG1513, [Score=332, Expect=2e-105]} {Celegans: WBGene00016331, obr-4, Oxysterol-binding protein, [Score=301, Expect=8e-95]} {Smed: dd_Smed_v6_7299_0_1, dd_Smed_v6_7299_0_1, [RH, Score=391, Expect=1e-124]} {RNA1509_36941} {RNA1310_1795.1} {RNA815_1100.1}
6.	MligTC455_47624	138	2.88	Mlig455_029496	Neo: - Age: - Regeneration-upregulated BL: 3.356 Regeneration-enriched BL: 3.356		0.963	-	-	-	0.963	-	-	Mlig455_029496 {REF} {Length: 2269} {RNA1310_46901}
7.	MligTC455_18190	116	2.41	Mlig455_011827	Neo: - Age: Down-Up-Down		0.955	-	-	-	-	-	0.955	Mlig455_011827 {REF} {Length: 1692} {TRANSSPLICED} {Pfam: THAP domain [PF05485.14, score=49.7]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=23.1]; Anti-sigma-K factor rskA [PF10099.11, score=22.6]} {RNA1509_21728} {RNA1310_31334.2} {RNA815_26124}
8.	MligTC455_42886	494	10.29	Mlig455_004248	Neo: - Age: -	AL136295.1	0.955	-	-	-	-	-	0.955	Mlig455_004248 {REF} {Length: 3161} {TRANSSPLICED} {Pfam: Endomembrane protein 70 [PF02990.18, score=493.4]} {Human: ENSG00000254692, AL136295.1, novel protein, [RH, Score=692, Expect=0.0]; ENSG00000285502, AL136295.15, novel protein, [RH, Score=692, Expect=0.0]; ENSG00000100926, TM9SF1, transmembrane 9 superfamily member 1, [RH, Score=685, Expect=0.0]; ENSG00000285465, TM9SF1, transmembrane 9 superfamily member 1, [RH, Score=685, Expect=0.0]} {Mouse: ENSMUSG00000002320, Tm9sf1, transmembrane 9 superfamily member 1, [RH, Score=683, Expect=0.0]} {Dmel: FBgn0035622, TM9SF3, Transmembrane 9 superfamily protein member 3, [Score=332, Expect=3e-106]} {Celegans: WBGene00021506, Y41D4A.4, Transmembrane 9 superfamily member, [Score=346, Expect=9e-112]} {Smed: dd_Smed_v6_4115_0_1, dd_Smed_v6_4115_0_1, [RH, Score=618, Expect=0.0]} {RNA1509_11922, RNA1509_20805, RNA1509_23244, RNA1509_47900, RNA1509_57407} {RNA1310_10868, RNA1509_11922, RNA1509_20805, RNA1509_23244, RNA1509_47900, RNA1509_57407} {RNA1509_11922, RNA1509_20805, RNA1509_23244, RNA1509_47900, RNA1509_57407, RNA815_2853}
9.	MligTC455_09094	56	1.16	Mlig455_013381	Neo: - Age: -		0.95	-	-	-	0.950	-	-	Mlig455_013381 {REF} {Length: 506} {NoTransDecoderORF} {RNA1310_99945}

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