Data search
Results for MligTC455_29405
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_29405 | 401 | 8.36 | Mlig455_012697, Mlig455_014617, Mlig455_016197, Mlig455_020640, Mlig455_022481, Mlig455_022482, Mlig455_033933, Mlig455_043863, Mlig455_054282, Mlig455_059379 | Neo: Irradiation Age: - Region-enriched R4: 3.024/0.00000 |
Mlig455_012697 {REF} {Length: 490} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=25.0]; GIY-YIG catalytic domain [PF01541.26, score=21.7]} {Smed: dd_Smed_v6_129_2_1, dd_Smed_v6_129_2_1, [Score=153, Expect=3e-41]} {RNA1509_54660} {RNA1310_22205} {RNA815_63252} Mlig455_014617 {REF} {Length: 191} {NoTransDecoderORF} {RNA1509_54660} {RNA1310_44007} {RNA815_23205} Mlig455_016197 {REF} {Length: 786} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=25.0]; GIY-YIG catalytic domain [PF01541.26, score=21.7]} {Smed: dd_Smed_v6_129_2_1, dd_Smed_v6_129_2_1, [Score=153, Expect=3e-41]} {RNA1509_54660} {RNA1310_8339} {RNA815_63252} Mlig455_020640 {REF} {Length: 2026} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=25.0]; GIY-YIG catalytic domain [PF01541.26, score=21.7]} {Smed: dd_Smed_v6_129_2_1, dd_Smed_v6_129_2_1, [Score=153, Expect=3e-41]} {RNA1509_54660} {RNA1310_8339, RNA1509_54660} {RNA1509_54660, RNA815_14127} Mlig455_022481 {REF} {Length: 358} {NoTransDecoderORF} {RNA1509_54660} {RNA1310_44007} {RNA815_63252} Mlig455_022482 {REF} {Length: 301} {NoTransDecoderORF} {RNA1509_54660} {RNA1310_44007} {RNA815_63252} Mlig455_033933 {REF} {Length: 593} {NoTransDecoderORF} {RNA1509_54660} {RNA1310_19647} {RNA815_63252} Mlig455_043863 {REF} {Length: 1710} {Pfam: GIY-YIG catalytic domain [PF01541.26, score=24.7]} {Smed: dd_Smed_v6_129_2_1, dd_Smed_v6_129_2_1, [Score=69.3, Expect=1e-13]} {RNA1509_54660} {RNA1310_8339} {RNA815_14127} Mlig455_054282 {REF} {Length: 1288} {NoTransDecoderORF} {RNA1509_54660} {RNA1310_19647} {RNA815_63252} Mlig455_059379 {REF} {Length: 294} {NoTransDecoderORF} {RNA1509_34250} {RNA1310_63459} {RNA815_23205} |
Cumulative graph for MligTC455_29405
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -3.238 | 3.562 | 0.13044 | 0.72912 | |
| RegionR2 | 0.637 | 3.562 | 0.32505 | 0.71719 | |
| RegionR3 | 0.612 | 3.562 | 0.28247 | 0.82577 | |
| RegionR4 | 3.024 | 3.562 | 0.00000 | 0.00000 | |
| RegionR5 | 0.212 | 3.562 | 0.70771 | 1.00000 | |
| RegionR6 | -0.524 | 3.562 | 0.51389 | 1.00000 | |
| RegionR7 | -1.024 | 3.562 | 0.32593 | 0.96091 | |
| RegionR8 | 0.301 | 3.562 | 0.73526 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 2.16 | 3.562 | 0.46091 | 1.00000 | |
| RegenerationR2 | 0.03 | 3.562 | 0.94600 | 1.00000 | |
| RegenerationR3 | -0.209 | 3.562 | 0.68456 | 0.94143 | |
| RegenerationR4 | -1.314 | 3.562 | 0.00540 | 0.10485 | |
| RegenerationR5 | 0.985 | 3.562 | 0.04139 | 0.33440 | |
| RegenerationR6 | 0.935 | 3.562 | 0.11688 | 0.42046 | |
| RegenerationBL | -1.348 | 3.562 | 0.15568 | 0.47219 | |
| RegenerationTP | 1.015 | 3.562 | 0.16282 | 0.59236 |
Genes with expression patterns similar to MligTC455_29405
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_29405 | 401 | 8.36 | Mlig455_012697, Mlig455_014617, Mlig455_016197, Mlig455_020640, Mlig455_022481, Mlig455_022482, Mlig455_033933, Mlig455_043863, Mlig455_054282, Mlig455_059379 | Neo: Irradiation Age: - Region-enriched R4: 3.024/0.00000 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_012697 {REF} {Length: 490} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=25.0]; GIY-YIG catalytic domain [PF01541.26, score=21.7]} {Smed: dd_Smed_v6_129_2_1, dd_Smed_v6_129_2_1, [Score=153, Expect=3e-41]} {RNA1509_54660} {RNA1310_22205} {RNA815_63252} Mlig455_014617 {REF} {Length: 191} {NoTransDecoderORF} {RNA1509_54660} {RNA1310_44007} {RNA815_23205} Mlig455_016197 {REF} {Length: 786} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=25.0]; GIY-YIG catalytic domain [PF01541.26, score=21.7]} {Smed: dd_Smed_v6_129_2_1, dd_Smed_v6_129_2_1, [Score=153, Expect=3e-41]} {RNA1509_54660} {RNA1310_8339} {RNA815_63252} Mlig455_020640 {REF} {Length: 2026} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=25.0]; GIY-YIG catalytic domain [PF01541.26, score=21.7]} {Smed: dd_Smed_v6_129_2_1, dd_Smed_v6_129_2_1, [Score=153, Expect=3e-41]} {RNA1509_54660} {RNA1310_8339, RNA1509_54660} {RNA1509_54660, RNA815_14127} Mlig455_022481 {REF} {Length: 358} {NoTransDecoderORF} {RNA1509_54660} {RNA1310_44007} {RNA815_63252} Mlig455_022482 {REF} {Length: 301} {NoTransDecoderORF} {RNA1509_54660} {RNA1310_44007} {RNA815_63252} Mlig455_033933 {REF} {Length: 593} {NoTransDecoderORF} {RNA1509_54660} {RNA1310_19647} {RNA815_63252} Mlig455_043863 {REF} {Length: 1710} {Pfam: GIY-YIG catalytic domain [PF01541.26, score=24.7]} {Smed: dd_Smed_v6_129_2_1, dd_Smed_v6_129_2_1, [Score=69.3, Expect=1e-13]} {RNA1509_54660} {RNA1310_8339} {RNA815_14127} Mlig455_054282 {REF} {Length: 1288} {NoTransDecoderORF} {RNA1509_54660} {RNA1310_19647} {RNA815_63252} Mlig455_059379 {REF} {Length: 294} {NoTransDecoderORF} {RNA1509_34250} {RNA1310_63459} {RNA815_23205} |
|
| 2. | MligTC455_29194 | 50 | 1.04 | Mlig455_041584 | Neo: - Age: - |
2.477 | 0.956 | 0.779 | - | - | - | 0.742 | Mlig455_041584 {REF} {Length: 3853} {TRANSSPLICED} {RNA1509_47234} {RNA1310_26826} {RNA815_14343.2} |