Data search


search
Exact
Search

Results for MligTC455_29435

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_29435 54960 1145.00 Mlig455_016778, Mlig455_016795

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.243

RPL13

Mlig455_016778 {REF} {Length: 779} {TRANSSPLICED} {Pfam: Ribosomal protein L13e [PF01294.20, score=250.4]} {Human: ENSG00000167526, RPL13, ribosomal protein L13, [RH, Score=216, Expect=5e-71]} {Mouse: ENSMUSG00000000740, Rpl13, ribosomal protein L13, [RH, Score=215, Expect=9e-71]} {Dmel: FBgn0011272, RpL13, Ribosomal protein L13, [RH, Score=216, Expect=3e-71]} {Celegans: WBGene00004425, rpl-13, 60S ribosomal protein L13, [RH, Score=181, Expect=1e-57]} {Smed: dd_Smed_v6_145_0_1, dd_Smed_v6_145_0_1, [RH, Score=192, Expect=2e-62]} {RNA1509_261} {RNA1310_45639.1} {RNA815_21701.2}

Mlig455_016795 {REF} {Length: 780} {TRANSSPLICED} {Pfam: Ribosomal protein L13e [PF01294.20, score=249.0]} {Human: ENSG00000167526, RPL13, ribosomal protein L13, [RH, Score=215, Expect=1e-70]} {Mouse: ENSMUSG00000000740, Rpl13, ribosomal protein L13, [RH, Score=214, Expect=2e-70]} {Dmel: FBgn0011272, RpL13, Ribosomal protein L13, [RH, Score=215, Expect=7e-71]} {Celegans: WBGene00004425, rpl-13, 60S ribosomal protein L13, [RH, Score=180, Expect=2e-57]} {Smed: dd_Smed_v6_145_0_1, dd_Smed_v6_145_0_1, [RH, Score=191, Expect=5e-62]} {RNA1509_261, RNA1509_5184, RNA1509_53160, RNA1509_825} {RNA1310_45639.1, RNA1509_261, RNA1509_5184, RNA1509_53160, RNA1509_825} {RNA1509_261, RNA1509_5184, RNA1509_53160, RNA1509_825, RNA815_21701.2}

Cumulative graph for MligTC455_29435

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.826 10.21 0.01008 0.29332
RegionR2 -0.427 10.21 0.11639 0.42207
RegionR3 0.267 10.21 0.25159 0.79594
RegionR4 0.32 10.21 0.20910 0.49313
RegionR5 0.528 10.21 0.01720 0.08672
RegionR6 0.28 10.21 0.22366 0.80463
RegionR7 0.366 10.21 0.10228 0.61011
RegionR8 -0.509 10.21 0.04407 0.41132

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.192 10.21 0.60579 1.00000
RegenerationR2 -0.232 10.21 0.44443 0.84271
RegenerationR3 -0.164 10.21 0.59360 0.90524
RegenerationR4 -0.101 10.21 0.74701 0.96971
RegenerationR5 -0.34 10.21 0.26528 0.69685
RegenerationR6 -0.272 10.21 0.37323 0.71592
RegenerationBL 0.014 10.21 0.95568 1.00000
RegenerationTP -0.557 10.21 0.04862 0.36231


Genes with expression patterns similar to MligTC455_29435

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_29435 54960 1145 Mlig455_016778, Mlig455_016795

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.243

RPL13 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_016778 {REF} {Length: 779} {TRANSSPLICED} {Pfam: Ribosomal protein L13e [PF01294.20, score=250.4]} {Human: ENSG00000167526, RPL13, ribosomal protein L13, [RH, Score=216, Expect=5e-71]} {Mouse: ENSMUSG00000000740, Rpl13, ribosomal protein L13, [RH, Score=215, Expect=9e-71]} {Dmel: FBgn0011272, RpL13, Ribosomal protein L13, [RH, Score=216, Expect=3e-71]} {Celegans: WBGene00004425, rpl-13, 60S ribosomal protein L13, [RH, Score=181, Expect=1e-57]} {Smed: dd_Smed_v6_145_0_1, dd_Smed_v6_145_0_1, [RH, Score=192, Expect=2e-62]} {RNA1509_261} {RNA1310_45639.1} {RNA815_21701.2}

Mlig455_016795 {REF} {Length: 780} {TRANSSPLICED} {Pfam: Ribosomal protein L13e [PF01294.20, score=249.0]} {Human: ENSG00000167526, RPL13, ribosomal protein L13, [RH, Score=215, Expect=1e-70]} {Mouse: ENSMUSG00000000740, Rpl13, ribosomal protein L13, [RH, Score=214, Expect=2e-70]} {Dmel: FBgn0011272, RpL13, Ribosomal protein L13, [RH, Score=215, Expect=7e-71]} {Celegans: WBGene00004425, rpl-13, 60S ribosomal protein L13, [RH, Score=180, Expect=2e-57]} {Smed: dd_Smed_v6_145_0_1, dd_Smed_v6_145_0_1, [RH, Score=191, Expect=5e-62]} {RNA1509_261, RNA1509_5184, RNA1509_53160, RNA1509_825} {RNA1310_45639.1, RNA1509_261, RNA1509_5184, RNA1509_53160, RNA1509_825} {RNA1509_261, RNA1509_5184, RNA1509_53160, RNA1509_825, RNA815_21701.2}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA