TomoSeq data search

Data search

Results for MligTC455_29438

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_29438	10	0.20	Mlig455_032981	Neo: - Age: -	TRPM1	Mlig455_032981 {REF} {Length: 4717} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=65.8]; Ankyrin repeat [PF13606.8, score=46.7]; Ankyrin repeats (many copies) [PF13637.8, score=38.0]; Ankyrin repeat [PF00023.32, score=28.1]; Ankyrin repeats (many copies) [PF13857.8, score=26.8]} {Human: ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=73.6, Expect=3e-12]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=73.6, Expect=3e-12]; ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=70.1, Expect=4e-11]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=74.3, Expect=1e-12]} {Dmel: FBgn0016920, nompC, no mechanoreceptor potential C, [Score=52.4, Expect=4e-06]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=55.8, Expect=3e-07]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=89.4, Expect=8e-18]} {RNA1509_12296} {RNA1310_1739} {RNA815_2547.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_29438

0.20

Mlig455_032981

Neo: -

Age: -

TRPM1

Mlig455_032981 {REF} {Length: 4717} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=65.8]; Ankyrin repeat [PF13606.8, score=46.7]; Ankyrin repeats (many copies) [PF13637.8, score=38.0]; Ankyrin repeat [PF00023.32, score=28.1]; Ankyrin repeats (many copies) [PF13857.8, score=26.8]} {Human: ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=73.6, Expect=3e-12]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=73.6, Expect=3e-12]; ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=70.1, Expect=4e-11]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=74.3, Expect=1e-12]} {Dmel: FBgn0016920, nompC, no mechanoreceptor potential C, [Score=52.4, Expect=4e-06]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=55.8, Expect=3e-07]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=89.4, Expect=8e-18]} {RNA1509_12296} {RNA1310_1739} {RNA815_2547.1}

Cumulative graph for MligTC455_29438

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_29438

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_29438	10	0.2	Mlig455_032981	Neo: - Age: -	TRPM1	1	-	-	-	-	1.000	-	Mlig455_032981 {REF} {Length: 4717} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=65.8]; Ankyrin repeat [PF13606.8, score=46.7]; Ankyrin repeats (many copies) [PF13637.8, score=38.0]; Ankyrin repeat [PF00023.32, score=28.1]; Ankyrin repeats (many copies) [PF13857.8, score=26.8]} {Human: ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=73.6, Expect=3e-12]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=73.6, Expect=3e-12]; ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=70.1, Expect=4e-11]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=74.3, Expect=1e-12]} {Dmel: FBgn0016920, nompC, no mechanoreceptor potential C, [Score=52.4, Expect=4e-06]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=55.8, Expect=3e-07]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=89.4, Expect=8e-18]} {RNA1509_12296} {RNA1310_1739} {RNA815_2547.1}
2.	MligTC455_31764	62	1.28	Mlig455_006258	Neo: - Age: Down-Down-Up Region-enriched R8: 4.078/0.01607	LMNA	0.974	-	-	-	-	0.974	-	Mlig455_006258 {REF} {Length: 2636} {Pfam: Intermediate filament protein [PF00038.23, score=111.4]} {Human: ENSG00000160789, LMNA, lamin A/C, [Score=87.8, Expect=7e-18]; ENSG00000026025, VIM, vimentin, [Score=84.7, Expect=4e-17]} {Mouse: ENSMUSG00000028063, Lmna, lamin A, [Score=86.3, Expect=2e-17]; ENSMUSG00000026728, Vim, vimentin, [Score=85.5, Expect=2e-17]; ENSMUSG00000095241, Gm5478, predicted pseudogene 5478, [Score=82.8, Expect=2e-16]} {Dmel: FBgn0010397, LamC, Lamin C, [Score=93.6, Expect=5e-20]} {Celegans: WBGene00002050, ifa-1, Intermediate filament protein ifa-1, [Score=165, Expect=1e-44]} {Smed: dd_Smed_v6_3871_0_1, dd_Smed_v6_3871_0_1, [Score=190, Expect=6e-54]} {RNA1509_56508} {RNA1310_5840} {RNA815_9167}
3.	MligTC455_39022	18	0.38	Mlig455_040588, Mlig455_062046, Mlig455_068792	Neo: - Age: -		0.961	-	-	-	-	0.961	-	Mlig455_040588 {REF} {Length: 1473} {RNA1509_21391} {RNA1310_6366} {RNA815_11612} Mlig455_062046 {REF} {Length: 802} {TRANSSPLICED} {RNA1509_21391} {RNA1310_6366} {RNA815_31706} Mlig455_068792 {REF} {Length: 1535} {TRANSSPLICED} {RNA1509_21391} {RNA1310_6366} {RNA815_11612}
4.	MligTC455_14147	361	7.52	Mlig455_035355, Mlig455_035394	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_035355 {REF} {Length: 382} {NoTransDecoderORF} {RNA1509_13458, RNA1509_56126} {RNA1310_54777, RNA1509_56126} {RNA1509_56126, RNA815_24075} Mlig455_035394 {REF} {Length: 1774} {NoTransDecoderORF} {RNA1509_13458} {RNA1310_34859} {RNA815_24075}