Data search


search
Exact
Search

Results for MligTC455_29455

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_29455 29081 605.86 Mlig455_012317

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.918

RPLP0 Mlig455_012317 {REF} {Length: 1346} {TRANSSPLICED} {Pfam: 60s Acidic ribosomal protein [PF00428.21, score=78.1]; Insertion domain in 60S ribosomal protein L10P [PF17777.3, score=75.2]; Ribosomal protein L10 [PF00466.22, score=73.8]} {Human: ENSG00000089157, RPLP0, ribosomal protein lateral stalk subunit P0, [RH, Score=355, Expect=1e-122]} {Mouse: ENSMUSG00000067274, Rplp0, ribosomal protein, large, P0, [RH, Score=349, Expect=2e-120]} {Dmel: FBgn0000100, RpLP0, Ribosomal protein LP0, [RH, Score=342, Expect=1e-117]} {Celegans: WBGene00004408, rla-0, 60S acidic ribosomal protein P0, [RH, Score=340, Expect=3e-117]} {Smed: dd_Smed_v6_161_0_1, dd_Smed_v6_161_0_1, [RH, Score=286, Expect=4e-96]} {RNA1509_21429, RNA1509_482} {RNA1310_25255.1, RNA1509_21429} {RNA1509_21429, RNA815_4450.2}

Cumulative graph for MligTC455_29455

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.003 9.256 0.99133 1.00000
RegionR2 -0.579 9.256 0.03284 0.20648
RegionR3 0.032 9.256 0.89144 1.00000
RegionR4 0.134 9.256 0.60041 0.91351
RegionR5 0.164 9.256 0.47000 0.83254
RegionR6 0.247 9.256 0.28261 0.87239
RegionR7 0.275 9.256 0.23068 0.85414
RegionR8 -0.27 9.256 0.29298 0.92174

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.21 9.256 0.58436 1.00000
RegenerationR2 -0.02 9.256 0.94713 1.00000
RegenerationR3 -0.243 9.256 0.42319 0.81746
RegenerationR4 -0.269 9.256 0.38699 0.80565
RegenerationR5 -0.456 9.256 0.12997 0.53578
RegenerationR6 -0.128 9.256 0.67206 0.90962
RegenerationBL 0.419 9.256 0.09891 0.36969
RegenerationTP -0.588 9.256 0.03932 0.33037


Genes with expression patterns similar to MligTC455_29455

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_29455 29081 605.86 Mlig455_012317

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.918

RPLP0 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_012317 {REF} {Length: 1346} {TRANSSPLICED} {Pfam: 60s Acidic ribosomal protein [PF00428.21, score=78.1]; Insertion domain in 60S ribosomal protein L10P [PF17777.3, score=75.2]; Ribosomal protein L10 [PF00466.22, score=73.8]} {Human: ENSG00000089157, RPLP0, ribosomal protein lateral stalk subunit P0, [RH, Score=355, Expect=1e-122]} {Mouse: ENSMUSG00000067274, Rplp0, ribosomal protein, large, P0, [RH, Score=349, Expect=2e-120]} {Dmel: FBgn0000100, RpLP0, Ribosomal protein LP0, [RH, Score=342, Expect=1e-117]} {Celegans: WBGene00004408, rla-0, 60S acidic ribosomal protein P0, [RH, Score=340, Expect=3e-117]} {Smed: dd_Smed_v6_161_0_1, dd_Smed_v6_161_0_1, [RH, Score=286, Expect=4e-96]} {RNA1509_21429, RNA1509_482} {RNA1310_25255.1, RNA1509_21429} {RNA1509_21429, RNA815_4450.2}
2. MligTC455_21491 708 14.74 Mlig455_002487, Mlig455_002679

Neo: -

Age: -

DDX24 0.972 - - - - 0.972 -

Mlig455_002487 {REF} {Length: 3216} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=139.5]; Helicase conserved C-terminal domain [PF00271.33, score=90.5]} {Human: ENSG00000089737, DDX24, DEAD-box helicase 24, [RH, Score=350, Expect=3e-109]; ENSG00000273761, DDX24, DEAD-box helicase 24, [RH, Score=350, Expect=3e-109]} {Mouse: ENSMUSG00000041645, Ddx24, DEAD (Asp-Glu-Ala-Asp) box polypeptide 24, [RH, Score=347, Expect=9e-108]} {Dmel: FBgn0034496, CG9143, [RH, Score=366, Expect=2e-115]} {Celegans: WBGene00018890, F55F8.2, [RH, Score=250, Expect=8e-73]} {Smed: dd_Smed_v6_7310_0_1, dd_Smed_v6_7310_0_1, [RH, Score=372, Expect=3e-120]} {RNA1509_49385, RNA1509_8890} {RNA1310_5098.1, RNA1509_49385, RNA1509_8890} {RNA1509_49385, RNA1509_8890, RNA815_5786}

Mlig455_002679 {REF} {Length: 3467} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=140.2]; Helicase conserved C-terminal domain [PF00271.33, score=90.5]} {Human: ENSG00000089737, DDX24, DEAD-box helicase 24, [RH, Score=351, Expect=2e-109]; ENSG00000273761, DDX24, DEAD-box helicase 24, [RH, Score=351, Expect=2e-109]} {Mouse: ENSMUSG00000041645, Ddx24, DEAD (Asp-Glu-Ala-Asp) box polypeptide 24, [RH, Score=347, Expect=3e-108]} {Dmel: FBgn0034496, CG9143, [RH, Score=366, Expect=1e-115]} {Celegans: WBGene00018890, F55F8.2, [RH, Score=250, Expect=1e-72]} {Smed: dd_Smed_v6_7310_0_1, dd_Smed_v6_7310_0_1, [RH, Score=373, Expect=2e-120]} {RNA1509_8890} {RNA1310_5098.1} {RNA815_5786}
3. MligTC455_31152 34308 714.75 Mlig455_024392

Neo: S/G2/M, no gonads

Age: logFC(26M/2M)=0.175

HSP90AA1 0.965 - - - - 0.965 - Mlig455_024392 {REF} {Length: 2947} {Pfam: Hsp90 protein [PF00183.20, score=769.6]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF02518.28, score=56.1]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF13589.8, score=38.7]} {Human: ENSG00000080824, HSP90AA1, heat shock protein 90 alpha family class A member 1, [RH, Score=1074, Expect=0.0]; ENSG00000096384, HSP90AB1, heat shock protein 90 alpha family class B member 1, [RH, Score=1058, Expect=0.0]} {Mouse: ENSMUSG00000021270, Hsp90aa1, heat shock protein 90, alpha (cytosolic), class A member 1, [RH, Score=1088, Expect=0.0]; ENSMUSG00000023944, Hsp90ab1, heat shock protein 90 alpha (cytosolic), class B member 1, [RH, Score=1064, Expect=0.0]} {Dmel: FBgn0001233, Hsp83, Heat shock protein 83, [RH, Score=1101, Expect=0.0]} {Celegans: WBGene00000915, daf-21, Heat shock protein 90, [RH, Score=1035, Expect=0.0]} {Smed: dd_Smed_v6_56_0_2, dd_Smed_v6_56_0_2, [RH, Score=1131, Expect=0.0]} {RNA1509_125, RNA1509_175, RNA1509_24378, RNA1509_806, RNA1509_874} {RNA1310_6914.1, RNA1509_175, RNA1509_24378, RNA1509_806, RNA1509_874} {RNA1509_175, RNA1509_24378, RNA1509_806, RNA1509_874, RNA815_2025.1}
4. MligTC455_33956 32072 668.16 Mlig455_035824

Neo: -

Age: -

Region-enriched R4: 1.046/0.01321

FTH1 0.959 - - - - 0.959 - Mlig455_035824 {REF} {Length: 997} {TRANSSPLICED} {Pfam: Ferritin-like domain [PF00210.26, score=136.5]; Rubrerythrin [PF02915.19, score=22.0]} {Human: ENSG00000167996, FTH1, ferritin heavy chain 1, [RH, Score=215, Expect=8e-72]} {Mouse: ENSMUSG00000024661, Fth1, ferritin heavy polypeptide 1, [RH, Score=212, Expect=9e-71]; ENSMUSG00000024510, Ftmt, ferritin mitochondrial, [RH, Score=211, Expect=9e-70]} {Dmel: FBgn0030449, Fer3HCH, Ferritin 3 heavy chain homologue, [RH, Score=166, Expect=1e-52]} {Celegans: WBGene00001501, ftn-2, Ferritin, [RH, Score=208, Expect=2e-69]} {Smed: dd_Smed_v6_3974_0_1, dd_Smed_v6_3974_0_1, [RH, Score=245, Expect=2e-84]} {RNA1509_13329, RNA1509_18215, RNA1509_22311, RNA1509_2290, RNA1509_31430, RNA1509_821} {RNA1310_33466, RNA1509_13329, RNA1509_18215, RNA1509_22311, RNA1509_2290, RNA1509_31430, RNA1509_821} {RNA1509_13329, RNA1509_18215, RNA1509_22311, RNA1509_2290, RNA1509_31430, RNA1509_821, RNA815_16555.2}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA